RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 AASDHQ4L235 1098 aaPredicted RBP17.51■□□□□ 0.39
CUX2-202ENST00000397643 PLA2G2CQ5R387 149 aa17.51■□□□□ 0.39
CUX2-202ENST00000397643 GPR158Q5T848 1215 aa17.51■□□□□ 0.39
CUX2-202ENST00000397643 ZPBP2Q6X784 338 aa17.51■□□□□ 0.39
CUX2-202ENST00000397643 FAM200AQ8TCP9 573 aa17.51■□□□□ 0.39
CUX2-202ENST00000397643 C8orf76Q96K31 380 aa17.51■□□□□ 0.39
CUX2-202ENST00000397643 LLPHQ9BRT6 129 aaKnown RBP17.51■□□□□ 0.39
CUX2-202ENST00000397643 MMTAG2Q9BU76 263 aaKnown RBP17.51■□□□□ 0.39
CUX2-202ENST00000397643 ATXN3LQ9H3M9 355 aa17.51■□□□□ 0.39
CUX2-202ENST00000397643 PLEKHA5Q9HAU0 1116 aa17.51■□□□□ 0.39
CUX2-202ENST00000397643 IL21Q9HBE4 155 aa17.51■□□□□ 0.39
CUX2-202ENST00000397643 DNM3Q9UQ16 869 aa17.51■□□□□ 0.39
CUX2-202ENST00000397643 ASB3Q9Y575 518 aa17.51■□□□□ 0.39
CUX2-202ENST00000397643 ASPMQ8IZT6 3477 aa17.51■□□□□ 0.39
CUX2-202ENST00000397643 LAMA1P25391 3075 aa17.5■□□□□ 0.39
CUX2-202ENST00000397643 CCDC163A0A0D9SF12 145 aa17.5■□□□□ 0.39
CUX2-202ENST00000397643 FAM189A1O60320 539 aa17.5■□□□□ 0.39
CUX2-202ENST00000397643 TYMPP19971 482 aa17.5■□□□□ 0.39
CUX2-202ENST00000397643 GUCY2CP25092 1073 aa17.5■□□□□ 0.39
CUX2-202ENST00000397643 CDC25AP30304 524 aa17.5■□□□□ 0.39
CUX2-202ENST00000397643 TNFSF9P41273 254 aa17.5■□□□□ 0.39
CUX2-202ENST00000397643 ALDH1A3P47895 512 aa17.5■□□□□ 0.39
CUX2-202ENST00000397643 PXNP49023 591 aaPredicted RBP17.5■□□□□ 0.39
CUX2-202ENST00000397643 MYBPC2Q14324 1141 aa17.5■□□□□ 0.39
CUX2-202ENST00000397643 OVOS1Q6IE37 1185 aa17.5■□□□□ 0.39
CUX2-202ENST00000397643 KBTBD6Q86V97 674 aa17.5■□□□□ 0.39
CUX2-202ENST00000397643 OR10T2Q8NGX3 314 aa17.5■□□□□ 0.39
CUX2-202ENST00000397643 BPIFB1Q8TDL5 484 aa17.5■□□□□ 0.39
CUX2-202ENST00000397643 KIF12Q96FN5 646 aa17.5■□□□□ 0.39
CUX2-202ENST00000397643 UBQLN1Q9UMX0 589 aaKnown RBP17.5■□□□□ 0.39
CUX2-202ENST00000397643 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.5■□□□□ 0.39
CUX2-202ENST00000397643 DPYSL4O14531 572 aa17.49■□□□□ 0.39
CUX2-202ENST00000397643 CLDN3O15551 220 aa17.49■□□□□ 0.39
CUX2-202ENST00000397643 RPP40O75818 363 aaKnown RBP17.49■□□□□ 0.39
CUX2-202ENST00000397643 CLTAP09496 248 aa17.49■□□□□ 0.39
CUX2-202ENST00000397643 PLS3P13797 630 aa17.49■□□□□ 0.39
CUX2-202ENST00000397643 TOB1P50616 345 aaPredicted RBP17.49■□□□□ 0.39
CUX2-202ENST00000397643 CYP4F8P98187 520 aa17.49■□□□□ 0.39
CUX2-202ENST00000397643 PLCB2Q00722 1185 aa17.49■□□□□ 0.39
CUX2-202ENST00000397643 STRN3Q13033 797 aa17.49■□□□□ 0.39
CUX2-202ENST00000397643 CUL4AQ13619 759 aa17.49■□□□□ 0.39
CUX2-202ENST00000397643 FSTL4Q6MZW2 842 aa17.49■□□□□ 0.39
CUX2-202ENST00000397643 CACNA2D4Q7Z3S7 1137 aa17.49■□□□□ 0.39
CUX2-202ENST00000397643 HAUS6Q7Z4H7 955 aa17.49■□□□□ 0.39
CUX2-202ENST00000397643 USP37Q86T82 979 aa17.49■□□□□ 0.39
CUX2-202ENST00000397643 C12orf50Q8NA57 414 aaPredicted RBP17.49■□□□□ 0.39
CUX2-202ENST00000397643 FBXO18Q8NFZ0 1043 aa17.49■□□□□ 0.39
CUX2-202ENST00000397643 LPIN3Q9BQK8 851 aa17.49■□□□□ 0.39
CUX2-202ENST00000397643 SMG9Q9H0W8 520 aaKnown RBP17.49■□□□□ 0.39
CUX2-202ENST00000397643 TASP1Q9H6P5 420 aa17.49■□□□□ 0.39
CUX2-202ENST00000397643 HPS4Q9NQG7 708 aa17.49■□□□□ 0.39
CUX2-202ENST00000397643 HSFX1Q9UBD0 423 aa17.49■□□□□ 0.39
CUX2-202ENST00000397643 RALYQ9UKM9 306 aaKnown RBP17.49■□□□□ 0.39
CUX2-202ENST00000397643 STK24Q9Y6E0 443 aa17.49■□□□□ 0.39
CUX2-202ENST00000397643 MYH11P35749 1972 aa17.49■□□□□ 0.39
CUX2-202ENST00000397643 IGF2RP11717 2491 aa17.48■□□□□ 0.39
CUX2-202ENST00000397643 ANK1P16157 1881 aa17.48■□□□□ 0.39
CUX2-202ENST00000397643 OTOL1A6NHN0 477 aaPredicted RBP17.48■□□□□ 0.39
CUX2-202ENST00000397643 FGF19O95750 216 aa17.48■□□□□ 0.39
CUX2-202ENST00000397643 ATF6P18850 670 aa17.48■□□□□ 0.39
CUX2-202ENST00000397643 HMGN5P82970 282 aaKnown RBP17.48■□□□□ 0.39
CUX2-202ENST00000397643 RAD51AP2Q09MP3 1159 aa17.48■□□□□ 0.39
CUX2-202ENST00000397643 ENOX2Q16206 610 aaKnown RBP17.48■□□□□ 0.39
CUX2-202ENST00000397643 ITPRIPL2Q3MIP1 535 aa17.48■□□□□ 0.39
CUX2-202ENST00000397643 TMEM196Q5HYL7 178 aa17.48■□□□□ 0.39
CUX2-202ENST00000397643 STPG1Q5TH74 334 aa17.48■□□□□ 0.39
CUX2-202ENST00000397643 DSTYKQ6XUX3 929 aa17.48■□□□□ 0.39
CUX2-202ENST00000397643 KCNN1Q92952 543 aa17.48■□□□□ 0.39
CUX2-202ENST00000397643 FAM83CQ9BQN1 747 aa17.48■□□□□ 0.39
CUX2-202ENST00000397643 TIPINQ9BVW5 301 aa17.48■□□□□ 0.39
CUX2-202ENST00000397643 SMOC1Q9H4F8 434 aa17.48■□□□□ 0.39
CUX2-202ENST00000397643 PCDHB6Q9Y5E3 794 aa17.48■□□□□ 0.39
CUX2-202ENST00000397643 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.48■□□□□ 0.39
CUX2-202ENST00000397643 ZZEF1O43149 2961 aa17.48■□□□□ 0.39
CUX2-202ENST00000397643 ZFYVE26Q68DK2 2539 aa17.48■□□□□ 0.39
CUX2-202ENST00000397643 ATG2BQ96BY7 2078 aa17.48■□□□□ 0.39
CUX2-202ENST00000397643 ATRXP46100 2492 aa17.47■□□□□ 0.39
CUX2-202ENST00000397643 BAHCC1Q9P281 2608 aa17.47■□□□□ 0.39
CUX2-202ENST00000397643 LACTBL1A8MY62 500 aa17.47■□□□□ 0.39
CUX2-202ENST00000397643 ADRB2P07550 413 aa17.47■□□□□ 0.39
CUX2-202ENST00000397643 HSP90AA1P07900 732 aaKnown RBP17.47■□□□□ 0.39
CUX2-202ENST00000397643 LILRA4P59901 499 aa17.47■□□□□ 0.39
CUX2-202ENST00000397643 ARHGAP15Q53QZ3 475 aa17.47■□□□□ 0.39
CUX2-202ENST00000397643 KRT79Q5XKE5 535 aa17.47■□□□□ 0.39
CUX2-202ENST00000397643 ITIH5Q86UX2 942 aa17.47■□□□□ 0.39
CUX2-202ENST00000397643 RIN3Q8TB24 985 aa17.47■□□□□ 0.39
CUX2-202ENST00000397643 ZC3H10Q96K80 434 aaKnown RBP17.47■□□□□ 0.39
CUX2-202ENST00000397643 SENP8Q96LD8 212 aa17.47■□□□□ 0.39
CUX2-202ENST00000397643 LSM14BQ9BX40 385 aaKnown RBP17.47■□□□□ 0.39
CUX2-202ENST00000397643 SLC46A2Q9BY10 475 aa17.47■□□□□ 0.39
CUX2-202ENST00000397643 RAB34Q9BZG1 259 aa17.47■□□□□ 0.39
CUX2-202ENST00000397643 POLR3BQ9NW08 1133 aaPredicted RBP17.47■□□□□ 0.39
CUX2-202ENST00000397643 PCDHGA5Q9Y5G8 931 aa17.47■□□□□ 0.39
CUX2-202ENST00000397643 DENND4CQ5VZ89 1909 aa17.47■□□□□ 0.39
CUX2-202ENST00000397643 AKAP3O75969 853 aa17.46■□□□□ 0.39
CUX2-202ENST00000397643 KCNK5O95279 499 aa17.46■□□□□ 0.39
CUX2-202ENST00000397643 PPP2R3AQ06190 1150 aa17.46■□□□□ 0.39
CUX2-202ENST00000397643 HYIQ5T013 277 aa17.46■□□□□ 0.39
CUX2-202ENST00000397643 SPATA1Q5VX52 437 aa17.46■□□□□ 0.39
CUX2-202ENST00000397643 TMEM150AQ86TG1 271 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms