RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 LCMT1Q9UIC8 334 aa20.26■□□□□ 0.83
TSPAN4-204ENST00000397404 SCN1AP35498 2009 aa20.26■□□□□ 0.83
TSPAN4-204ENST00000397404 USP27XA6NNY8 438 aa20.25■□□□□ 0.83
TSPAN4-204ENST00000397404 CYP1A1P04798 512 aaPredicted RBP20.25■□□□□ 0.83
TSPAN4-204ENST00000397404 ODC1P11926 461 aa20.25■□□□□ 0.83
TSPAN4-204ENST00000397404 CHRNB2P17787 502 aa20.25■□□□□ 0.83
TSPAN4-204ENST00000397404 CDH5P33151 784 aaPredicted RBP20.25■□□□□ 0.83
TSPAN4-204ENST00000397404 CLCNKBP51801 687 aa20.25■□□□□ 0.83
TSPAN4-204ENST00000397404 RAD23BP54727 409 aa20.25■□□□□ 0.83
TSPAN4-204ENST00000397404 SNX16P57768 344 aa20.25■□□□□ 0.83
TSPAN4-204ENST00000397404 CENPCQ03188 943 aa20.25■□□□□ 0.83
TSPAN4-204ENST00000397404 RNASELQ05823 741 aaKnown RBP20.25■□□□□ 0.83
TSPAN4-204ENST00000397404 PPIGQ13427 754 aaKnown RBP eCLIP20.25■□□□□ 0.833e-9■■■□□ 16.8
TSPAN4-204ENST00000397404 CNGA2Q16280 664 aa20.25■□□□□ 0.83
TSPAN4-204ENST00000397404 CLEC16AQ2KHT3 1053 aa20.25■□□□□ 0.83
TSPAN4-204ENST00000397404 SOWAHAQ2M3V2 549 aa20.25■□□□□ 0.83
TSPAN4-204ENST00000397404 SGO2Q562F6 1265 aa20.25■□□□□ 0.83
TSPAN4-204ENST00000397404 CLLU1OSQ5K130 101 aa20.25■□□□□ 0.83
TSPAN4-204ENST00000397404 TMEM35BQ8NCS4 154 aa20.25■□□□□ 0.83
TSPAN4-204ENST00000397404 SECISBP2LQ93073 1101 aaKnown RBP20.25■□□□□ 0.83
TSPAN4-204ENST00000397404 LZTFL1Q9NQ48 299 aa20.25■□□□□ 0.83
TSPAN4-204ENST00000397404 MIOSQ9NXC5 875 aa20.25■□□□□ 0.83
TSPAN4-204ENST00000397404 CYB561D2O14569 222 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 POMCP01189 267 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 AMHP03971 560 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 CYP11A1P05108 521 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 MMEP08473 750 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 UNGP13051 313 aaPredicted RBP20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 TNNT1P13805 278 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 GNL1P36915 607 aaPredicted RBP20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 ARHGAP25P42331 645 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 NSFP46459 744 aaKnown RBP20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 ACAD10Q6JQN1 1059 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 ADGRF2Q8IZF7 708 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 CRYBG2Q8N1P7 616 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 LRRC43Q8N309 656 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 SLC4A11Q8NBS3 891 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 KIF18AQ8NI77 898 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 OLIG1Q8TAK6 271 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 SLC20A1Q8WUM9 679 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 C16orf45Q96MC5 204 aaPredicted RBP20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 NOX5Q96PH1 765 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 TBC1D13Q9NVG8 400 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 INPP5FQ9Y2H2 1132 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 MICAL3Q7RTP6 2002 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 M0QZQ0 153 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 B3GAT3O94766 335 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 TYMPP19971 482 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 NDST1P52848 882 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 GPC5P78333 572 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 DNTTIP2Q5QJE6 756 aaKnown RBP20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 DSTYKQ6XUX3 929 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 DEFB128Q7Z7B8 93 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 METTL23Q86XA0 190 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 C17orf53Q8N3J3 647 aaPredicted RBP20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 WHAMMQ8TF30 809 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 SENP8Q96LD8 212 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 HTATIP2Q9BUP3 242 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 SDCBP2Q9H190 292 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 GOLGA2P5Q9HBQ8 144 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 PRDM5Q9NQX1 630 aaPredicted RBP20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 PUF60Q9UHX1 559 aaKnown RBP20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 GTF3C4Q9UKN8 822 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 STXBP5LQ9Y2K9 1186 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 PAXBP1Q9Y5B6 917 aa20.24■□□□□ 0.83
TSPAN4-204ENST00000397404 TRIM43BA6NCK2 446 aa20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 A8MXQ7 604 aa20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 GABRDO14764 452 aa20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 PPEF2O14830 753 aa20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 SETSIPP0DME0 302 aa20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 PCSK1P29120 753 aa20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 HADHBP55084 474 aaKnown RBP20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 CDH8P55286 799 aa20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 C1QBPQ07021 282 aaKnown RBP20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 ELAVL2Q12926 359 aaKnown RBP20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 TUBB2AQ13885 445 aa20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 TAF3Q5VWG9 929 aa20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 COLGALT2Q8IYK4 626 aa20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 OR6B3Q8NGW1 331 aa20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 RFFLQ8WZ73 363 aa20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 TRIM43Q96BQ3 446 aaPredicted RBP20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 SUSD3Q96L08 255 aa20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 CASD1Q96PB1 797 aa20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 TUBB2BQ9BVA1 445 aa20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 OXCT2Q9BYC2 517 aaPredicted RBP20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 IL23AQ9NPF7 189 aa20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 AVENQ9NQS1 362 aaPredicted RBP20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 RNF19AQ9NV58 838 aa20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 UVRAGQ9P2Y5 699 aa20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 STK39Q9UEW8 545 aa20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 STRIP2Q9ULQ0 834 aa20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 GUCA1BQ9UMX6 200 aa20.23■□□□□ 0.83
TSPAN4-204ENST00000397404 NCANO14594 1321 aa20.22■□□□□ 0.83
TSPAN4-204ENST00000397404 LTBP2Q14767 1821 aa20.22■□□□□ 0.83
TSPAN4-204ENST00000397404 FTLP02792 175 aaPredicted RBP20.22■□□□□ 0.83
TSPAN4-204ENST00000397404 CALB1P05937 261 aa20.22■□□□□ 0.83
TSPAN4-204ENST00000397404 CD19P15391 556 aa20.22■□□□□ 0.83
TSPAN4-204ENST00000397404 GALCP54803 685 aa20.22■□□□□ 0.83
TSPAN4-204ENST00000397404 LIN9Q5TKA1 542 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms