RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 OPHN1O60890 802 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 REC8O95072 547 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 CFIP05156 583 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 SPATA31C1P0DKV0 1188 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 CYP11B2P19099 503 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 ABCG1P45844 678 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 EFNA5P52803 228 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 PLCB2Q00722 1185 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 SOX4Q06945 474 aaPredicted RBP10.31□□□□□ -0.76
NEDD9-203ENST00000397378 PSMD2Q13200 908 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 NR5A1Q13285 461 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 HNRNPDQ14103 355 aaKnown RBP10.31□□□□□ -0.76
NEDD9-203ENST00000397378 STXBP5Q5T5C0 1151 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 ALKAL1Q6UXT8 129 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 SYT13Q7L8C5 426 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 APBB1IPQ7Z5R6 666 aaPredicted RBP10.31□□□□□ -0.76
NEDD9-203ENST00000397378 SKAP1Q86WV1 359 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 TSTD1Q8NFU3 115 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 DEPTORQ8TB45 409 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 PIP4K2CQ8TBX8 421 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 BPIFB1Q8TDL5 484 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 TNFRSF25Q93038 417 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 LRRC3BQ96PB8 259 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 DCBLD2Q96PD2 775 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 MTMR9Q96QG7 549 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 LARP6Q9BRS8 491 aaKnown RBP10.31□□□□□ -0.76
NEDD9-203ENST00000397378 TM6SF1Q9BZW5 370 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 FSCN3Q9NQT6 498 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 SLC38A7Q9NVC3 462 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 AFF4Q9UHB7 1163 aaKnown RBP10.31□□□□□ -0.76
NEDD9-203ENST00000397378 FBXL5Q9UKA1 691 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 CIZ1Q9ULV3 898 aaPredicted RBP10.31□□□□□ -0.76
NEDD9-203ENST00000397378 USP20Q9Y2K6 914 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 PCDHB9Q9Y5E1 797 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 ANK1P16157 1881 aa10.31□□□□□ -0.76
NEDD9-203ENST00000397378 TNRC6BQ9UPQ9 1833 aaKnown RBP10.3□□□□□ -0.76
NEDD9-203ENST00000397378 ASXL3Q9C0F0 2248 aa10.3□□□□□ -0.76
NEDD9-203ENST00000397378 NEMFO60524 1076 aa10.3□□□□□ -0.76
NEDD9-203ENST00000397378 FTH1P19P0C7X4 201 aa10.3□□□□□ -0.76
NEDD9-203ENST00000397378 RPL9P32969 192 aaKnown RBP10.3□□□□□ -0.76
NEDD9-203ENST00000397378 KRT2P35908 639 aa10.3□□□□□ -0.76
NEDD9-203ENST00000397378 GRM5P41594 1212 aa10.3□□□□□ -0.76
NEDD9-203ENST00000397378 TXKP42681 527 aa10.3□□□□□ -0.76
NEDD9-203ENST00000397378 CACNB1Q02641 598 aaPredicted RBP10.3□□□□□ -0.76
NEDD9-203ENST00000397378 SCRN1Q12765 414 aa10.3□□□□□ -0.76
NEDD9-203ENST00000397378 TRIP6Q15654 476 aaKnown RBP10.3□□□□□ -0.76
NEDD9-203ENST00000397378 NT5DC1Q5TFE4 455 aa10.3□□□□□ -0.76
NEDD9-203ENST00000397378 ATF7IP2Q5U623 682 aa10.3□□□□□ -0.76
NEDD9-203ENST00000397378 CATSPER3Q86XQ3 398 aa10.3□□□□□ -0.76
NEDD9-203ENST00000397378 SYT12Q8IV01 421 aa10.3□□□□□ -0.76
NEDD9-203ENST00000397378 ACDQ96AP0 544 aa10.3□□□□□ -0.76
NEDD9-203ENST00000397378 SUSD3Q96L08 255 aa10.3□□□□□ -0.76
NEDD9-203ENST00000397378 CAMK1GQ96NX5 476 aa10.3□□□□□ -0.76
NEDD9-203ENST00000397378 NACC1Q96RE7 527 aa10.3□□□□□ -0.76
NEDD9-203ENST00000397378 CLMPQ9H6B4 373 aa10.3□□□□□ -0.76
NEDD9-203ENST00000397378 TOPORSQ9NS56 1045 aaPredicted RBP10.3□□□□□ -0.76
NEDD9-203ENST00000397378 STK24Q9Y6E0 443 aa10.3□□□□□ -0.76
NEDD9-203ENST00000397378 APC2O95996 2303 aa10.3□□□□□ -0.76
NEDD9-203ENST00000397378 KALRNO60229 2985 aa10.3□□□□□ -0.76
NEDD9-203ENST00000397378 KIAA1549LQ6ZVL6 1849 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 PTPRBP23467 1997 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 A0A087WV48 116 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 PODXLO00592 558 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 TRDMT1O14717 391 aaKnown RBP10.29□□□□□ -0.76
NEDD9-203ENST00000397378 CAPN9O14815 690 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 MED24O75448 989 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 KCNE1P15382 129 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 LIG1P18858 919 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 YARSP54577 528 aaKnown RBP10.29□□□□□ -0.76
NEDD9-203ENST00000397378 CYP4F3Q08477 520 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 CTXN3Q4LDR2 81 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 ANO7Q6IWH7 933 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 ZNF280DQ6N043 979 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 SLC23A3Q6PIS1 610 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 PADI6Q6TGC4 694 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 CENPQQ7L2Z9 268 aaPredicted RBP10.29□□□□□ -0.76
NEDD9-203ENST00000397378 LPCAT2Q7L5N7 544 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 TTC30AQ86WT1 665 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 BEST2Q8NFU1 509 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 WASF1Q92558 559 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 IFT74Q96LB3 600 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 POLR3CQ9BUI4 534 aaPredicted RBP10.29□□□□□ -0.76
NEDD9-203ENST00000397378 CCDC94Q9BW85 323 aaPredicted RBP10.29□□□□□ -0.76
NEDD9-203ENST00000397378 LRRC3Q9BY71 257 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 BRMS1Q9HCU9 246 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 TMEM74BQ9NUR3 256 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 THG1LQ9NWX6 298 aaKnown RBP10.29□□□□□ -0.76
NEDD9-203ENST00000397378 TPCN1Q9ULQ1 816 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 TNFSF13BQ9Y275 285 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 NUB1Q9Y5A7 615 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 URB1O60287 2271 aaKnown RBP10.29□□□□□ -0.76
NEDD9-203ENST00000397378 MYO16Q9Y6X6 1858 aa10.29□□□□□ -0.76
NEDD9-203ENST00000397378 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 ARHGEF35A5YM69 484 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 K7ERI5 159 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 WNT7AO00755 349 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 TNFRSF10BO14763 440 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 MAP3K13O43283 966 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 PFKFB2O60825 505 aa10.28□□□□□ -0.76
NEDD9-203ENST00000397378 CPB1P15086 417 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms