RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 CFAP69A5D8W1 941 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 C2CD2LO14523 706 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 TRAFD1O14545 582 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-206ENST00000397163 GRIN3BO60391 1043 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 PFDN1O60925 122 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 FDX1P10109 184 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 CETN2P41208 172 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 NSFP46459 744 aaKnown RBP9.67□□□□□ -0.86
CAPN3-206ENST00000397163 PEX3P56589 373 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 TAS2R40P59535 323 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 KLF1Q13351 362 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-206ENST00000397163 OLFML2BQ68BL8 750 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 CLNKQ7Z7G1 428 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 ZBED8Q8IZ13 594 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 GMCL1P1Q8NEA9 526 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 FBXL13Q8NEE6 735 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 SH3TC2Q8TF17 1288 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 SNRNP27Q8WVK2 155 aaKnown RBP9.67□□□□□ -0.86
CAPN3-206ENST00000397163 PI4K2AQ9BTU6 479 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 PHACTR1Q9C0D0 580 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 FHDC1Q9C0D6 1143 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-206ENST00000397163 EHMT1Q9H9B1 1298 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 RAB20Q9NX57 234 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 RPL26L1Q9UNX3 145 aaKnown RBP9.67□□□□□ -0.86
CAPN3-206ENST00000397163 COL24A1Q17RW2 1714 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-206ENST00000397163 PROSCO94903 275 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 KRT4P19013 534 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 FUT4P22083 530 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 KLRC2P26717 231 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 ARSEP51690 589 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 BPIFB4P59827 614 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 ZBTB16Q05516 673 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 GPS1Q13098 491 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 DYNC1I2Q13409 638 aaKnown RBP9.67□□□□□ -0.86
CAPN3-206ENST00000397163 ZRSR2Q15696 482 aaKnown RBP9.67□□□□□ -0.86
CAPN3-206ENST00000397163 DBN1Q16643 649 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 CRY2Q49AN0 593 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 IRGCQ6NXR0 463 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 TDRPQ86YL5 185 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 VPS52Q8N1B4 723 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 GLIS1Q8NBF1 620 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-206ENST00000397163 MCUR1Q96AQ8 359 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 BICD1Q96G01 975 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 DNAJC1Q96KC8 554 aaKnown RBP9.67□□□□□ -0.86
CAPN3-206ENST00000397163 MIPEPQ99797 713 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 CADM1Q9BY67 442 aaKnown RBP9.67□□□□□ -0.86
CAPN3-206ENST00000397163 TMEM8AQ9HCN3 771 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 AVENQ9NQS1 362 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-206ENST00000397163 SAR1AQ9NR31 198 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 PCDHGA4Q9Y5G9 962 aa9.67□□□□□ -0.86
CAPN3-206ENST00000397163 ATRNL1Q5VV63 1379 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 PI4K2BG5E9Z4 385 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 DNALI1O14645 258 aaPredicted RBP9.66□□□□□ -0.86
CAPN3-206ENST00000397163 CAPN9O14815 690 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 ATP2A1O14983 1001 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 CCDC22O60826 627 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 HAUS5O94927 633 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 GH2P01242 217 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 SKIP12755 728 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 ETS1P14921 441 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 CRKP46108 304 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 GPC3P51654 580 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 SLC18A1P54219 525 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 LMNB2Q03252 620 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 HHIPL2Q6UWX4 724 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 APLFQ8IW19 511 aaPredicted RBP9.66□□□□□ -0.86
CAPN3-206ENST00000397163 KBTBD2Q8IY47 623 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 ABTB1Q969K4 478 aaPredicted RBP9.66□□□□□ -0.86
CAPN3-206ENST00000397163 C11orf70Q9BRQ4 267 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 ZWILCHQ9H900 591 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 GPRC5CQ9NQ84 441 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 ANKFY1Q9P2R3 1169 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 CHMP2BQ9UQN3 213 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 LRCH1Q9Y2L9 728 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 PCDHAC2Q9Y5I4 1007 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 WASF2Q9Y6W5 498 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 QSER1Q2KHR3 1735 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 PMM2O15305 246 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 GYG2O15488 501 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 HNRNPCL1O60812 293 aaKnown RBP9.66□□□□□ -0.86
CAPN3-206ENST00000397163 TJP3O95049 919 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 SERPINB2P05120 415 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 MAPTP10636 758 aaKnown RBP9.66□□□□□ -0.86
CAPN3-206ENST00000397163 FGFR1P11362 822 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 KRT10P13645 584 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 ATF7P17544 494 aaPredicted RBP9.66□□□□□ -0.86
CAPN3-206ENST00000397163 ADRA1DP25100 572 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 PIK3CAP42336 1068 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 PDIA2Q13087 525 aaKnown RBP9.66□□□□□ -0.86
CAPN3-206ENST00000397163 MAPK6Q16659 721 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 ANKS1BQ7Z6G8 1248 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 ANKMY2Q8IV38 441 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 TRIM42Q8IWZ5 723 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 SCYL3Q8IZE3 742 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 STMN2Q93045 179 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 TRIM11Q96F44 468 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 YIPF2Q9BWQ6 316 aa9.66□□□□□ -0.86
CAPN3-206ENST00000397163 MAK16Q9BXY0 300 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms