RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 SEZ6Q53EL9 994 aa16.28■□□□□ 0.2
SEC13-206ENST00000397102 OVOS1Q6IE37 1185 aa16.28■□□□□ 0.2
SEC13-206ENST00000397102 DSTYKQ6XUX3 929 aa16.28■□□□□ 0.2
SEC13-206ENST00000397102 TMEM130Q8N3G9 435 aa16.28■□□□□ 0.2
SEC13-206ENST00000397102 TTC9BQ8N6N2 239 aa16.28■□□□□ 0.2
SEC13-206ENST00000397102 DUSP15Q9H1R2 295 aaPredicted RBP16.28■□□□□ 0.2
SEC13-206ENST00000397102 C17orf75Q9HAS0 396 aa16.28■□□□□ 0.2
SEC13-206ENST00000397102 GKN1Q9NS71 199 aa16.28■□□□□ 0.2
SEC13-206ENST00000397102 DDX19AQ9NUU7 478 aaKnown RBP16.28■□□□□ 0.2
SEC13-206ENST00000397102 ANKFY1Q9P2R3 1169 aa16.28■□□□□ 0.2
SEC13-206ENST00000397102 LRWD1Q9UFC0 647 aa16.28■□□□□ 0.2
SEC13-206ENST00000397102 UBQLN1Q9UMX0 589 aaKnown RBP16.28■□□□□ 0.2
SEC13-206ENST00000397102 KIAA1549LQ6ZVL6 1849 aa16.28■□□□□ 0.2
SEC13-206ENST00000397102 NUP205Q92621 2012 aa16.28■□□□□ 0.2
SEC13-206ENST00000397102 ZNF638Q14966 1978 aaKnown RBP16.27■□□□□ 0.2
SEC13-206ENST00000397102 ANK1P16157 1881 aa16.27■□□□□ 0.2
SEC13-206ENST00000397102 TMEM8BA6NDV4 472 aa16.27■□□□□ 0.2
SEC13-206ENST00000397102 RNF40O75150 1001 aa16.27■□□□□ 0.2
SEC13-206ENST00000397102 SOAT2O75908 522 aa16.27■□□□□ 0.2
SEC13-206ENST00000397102 RHOBTB1O94844 696 aa16.27■□□□□ 0.2
SEC13-206ENST00000397102 LARGE1O95461 756 aa16.27■□□□□ 0.2
SEC13-206ENST00000397102 CXCL8P10145 99 aa16.27■□□□□ 0.2
SEC13-206ENST00000397102 FXR2P51116 673 aaKnown RBP eCLIP16.27■□□□□ 0.2
SEC13-206ENST00000397102 ZNF252P-AS1Q0IIN9 211 aa16.27■□□□□ 0.2
SEC13-206ENST00000397102 FOXC1Q12948 553 aa16.27■□□□□ 0.2
SEC13-206ENST00000397102 STRN3Q13033 797 aa16.27■□□□□ 0.2
SEC13-206ENST00000397102 MAPK7Q13164 816 aa16.27■□□□□ 0.2
SEC13-206ENST00000397102 RUNX3Q13761 415 aa16.27■□□□□ 0.2
SEC13-206ENST00000397102 KARSQ15046 597 aaKnown RBP16.27■□□□□ 0.2
SEC13-206ENST00000397102 SAFBQ15424 915 aaKnown RBP eCLIP16.27■□□□□ 0.2
SEC13-206ENST00000397102 ZBTB6Q15916 424 aa16.27■□□□□ 0.2
SEC13-206ENST00000397102 ME3Q16798 604 aa16.27■□□□□ 0.2
SEC13-206ENST00000397102 GCNAQ96QF7 691 aa16.27■□□□□ 0.2
SEC13-206ENST00000397102 FAM83CQ9BQN1 747 aa16.27■□□□□ 0.2
SEC13-206ENST00000397102 TMEM121BQ9BXQ6 578 aaPredicted RBP16.27■□□□□ 0.2
SEC13-206ENST00000397102 IL21Q9HBE4 155 aa16.27■□□□□ 0.2
SEC13-206ENST00000397102 HPS4Q9NQG7 708 aa16.27■□□□□ 0.2
SEC13-206ENST00000397102 ZMYM5Q9UJ78 669 aa16.27■□□□□ 0.2
SEC13-206ENST00000397102 WASF3Q9UPY6 502 aa16.27■□□□□ 0.2
SEC13-206ENST00000397102 STK24Q9Y6E0 443 aa16.27■□□□□ 0.2
SEC13-206ENST00000397102 FRYQ5TBA9 3013 aa16.27■□□□□ 0.2
SEC13-206ENST00000397102 TTC26A0AVF1 554 aa16.26■□□□□ 0.19
SEC13-206ENST00000397102 C4orf47A7E2U8 309 aa16.26■□□□□ 0.19
SEC13-206ENST00000397102 GIPC1O14908 333 aa16.26■□□□□ 0.19
SEC13-206ENST00000397102 SLC16A4O15374 487 aa16.26■□□□□ 0.19
SEC13-206ENST00000397102 JAK2O60674 1132 aa16.26■□□□□ 0.19
SEC13-206ENST00000397102 HOXB3P14651 431 aaPredicted RBP16.26■□□□□ 0.19
SEC13-206ENST00000397102 AMPD2Q01433 879 aa16.26■□□□□ 0.19
SEC13-206ENST00000397102 CREB5Q02930 508 aa16.26■□□□□ 0.19
SEC13-206ENST00000397102 SPAG1Q07617 926 aa16.26■□□□□ 0.19
SEC13-206ENST00000397102 MCL1Q07820 350 aa16.26■□□□□ 0.19
SEC13-206ENST00000397102 VEPH1Q14D04 833 aa16.26■□□□□ 0.19
SEC13-206ENST00000397102 DAB2IPQ5VWQ8 1189 aa16.26■□□□□ 0.19
SEC13-206ENST00000397102 ARMCX5Q6P1M9 558 aa16.26■□□□□ 0.19
SEC13-206ENST00000397102 ZPBP2Q6X784 338 aa16.26■□□□□ 0.19
SEC13-206ENST00000397102 SNX29Q8TEQ0 813 aa16.26■□□□□ 0.19
SEC13-206ENST00000397102 CHFRQ96EP1 664 aa16.26■□□□□ 0.19
SEC13-206ENST00000397102 KIF12Q96FN5 646 aa16.26■□□□□ 0.19
SEC13-206ENST00000397102 HHIPQ96QV1 700 aa16.26■□□□□ 0.19
SEC13-206ENST00000397102 LPIN3Q9BQK8 851 aa16.26■□□□□ 0.19
SEC13-206ENST00000397102 NTPCRQ9BSD7 190 aaKnown RBP16.26■□□□□ 0.19
SEC13-206ENST00000397102 SLC46A2Q9BY10 475 aa16.26■□□□□ 0.19
SEC13-206ENST00000397102 ADAM33Q9BZ11 813 aa16.26■□□□□ 0.19
SEC13-206ENST00000397102 SMG9Q9H0W8 520 aaKnown RBP16.26■□□□□ 0.19
SEC13-206ENST00000397102 OBSL1O75147 1896 aa16.26■□□□□ 0.19
SEC13-206ENST00000397102 MYO16Q9Y6X6 1858 aa16.26■□□□□ 0.19
SEC13-206ENST00000397102 BCLAF3A2AJT9 711 aaKnown RBP16.25■□□□□ 0.19
SEC13-206ENST00000397102 E9PMD0 336 aa16.25■□□□□ 0.19
SEC13-206ENST00000397102 CLDN3O15551 220 aa16.25■□□□□ 0.19
SEC13-206ENST00000397102 XPOTO43592 962 aaKnown RBP16.25■□□□□ 0.19
SEC13-206ENST00000397102 CAVIN2O95810 425 aa16.25■□□□□ 0.19
SEC13-206ENST00000397102 EGFP01133 1207 aa16.25■□□□□ 0.19
SEC13-206ENST00000397102 CLTAP09496 248 aa16.25■□□□□ 0.19
SEC13-206ENST00000397102 DRD1P21728 446 aa16.25■□□□□ 0.19
SEC13-206ENST00000397102 TUFMP49411 452 aaKnown RBP16.25■□□□□ 0.19
SEC13-206ENST00000397102 ACAP1Q15027 740 aa16.25■□□□□ 0.19
SEC13-206ENST00000397102 FBXO43Q4G163 708 aa16.25■□□□□ 0.19
SEC13-206ENST00000397102 TTC38Q5R3I4 469 aa16.25■□□□□ 0.19
SEC13-206ENST00000397102 RINT1Q6NUQ1 792 aa16.25■□□□□ 0.19
SEC13-206ENST00000397102 CMTM8Q8IZV2 173 aa16.25■□□□□ 0.19
SEC13-206ENST00000397102 SEPT5Q99719 369 aaPredicted RBP16.25■□□□□ 0.19
SEC13-206ENST00000397102 RUSC1Q9BVN2 902 aa16.25■□□□□ 0.19
SEC13-206ENST00000397102 TIPINQ9BVW5 301 aa16.25■□□□□ 0.19
SEC13-206ENST00000397102 EBF3Q9H4W6 596 aa16.25■□□□□ 0.19
SEC13-206ENST00000397102 POLR3BQ9NW08 1133 aaPredicted RBP16.25■□□□□ 0.19
SEC13-206ENST00000397102 EBF1Q9UH73 591 aa16.25■□□□□ 0.19
SEC13-206ENST00000397102 DNM3Q9UQ16 869 aa16.25■□□□□ 0.19
SEC13-206ENST00000397102 LNP1A1A4G5 178 aa16.24■□□□□ 0.19
SEC13-206ENST00000397102 OTOL1A6NHN0 477 aaPredicted RBP16.24■□□□□ 0.19
SEC13-206ENST00000397102 ODC1P11926 461 aa16.24■□□□□ 0.19
SEC13-206ENST00000397102 ATF6P18850 670 aa16.24■□□□□ 0.19
SEC13-206ENST00000397102 PPP2R3AQ06190 1150 aa16.24■□□□□ 0.19
SEC13-206ENST00000397102 PDIA5Q14554 519 aa16.24■□□□□ 0.19
SEC13-206ENST00000397102 SH3PXD2AQ5TCZ1 1133 aa16.24■□□□□ 0.19
SEC13-206ENST00000397102 TRIM68Q6AZZ1 485 aa16.24■□□□□ 0.19
SEC13-206ENST00000397102 C1orf186Q6ZWK4 172 aa16.24■□□□□ 0.19
SEC13-206ENST00000397102 SYT13Q7L8C5 426 aa16.24■□□□□ 0.19
SEC13-206ENST00000397102 SPIRE2Q8WWL2 714 aa16.24■□□□□ 0.19
SEC13-206ENST00000397102 EXOC4Q96A65 974 aa16.24■□□□□ 0.19
SEC13-206ENST00000397102 KIF9Q9HAQ2 790 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms