RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 GOLGA8JA6NMD2 632 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 PPEF2O14830 753 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 SPTLC1O15269 473 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 GALR2O43603 387 aaPredicted RBP15.01□□□□□ -0.01
SEC13-204ENST00000397099 NARSO43776 548 aaKnown RBP15.01□□□□□ -0.01
SEC13-204ENST00000397099 SEC24AO95486 1093 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 CFHP08603 1231 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 POLR2BP30876 1174 aaKnown RBP15.01□□□□□ -0.01
SEC13-204ENST00000397099 LHX1P48742 406 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 CLCN5P51795 746 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 NDUFA8P51970 172 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 MYL7Q01449 175 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 TSPY1Q01534 308 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 HTR4Q13639 388 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 NFE2Q16621 373 aaPredicted RBP15.01□□□□□ -0.01
SEC13-204ENST00000397099 CENPPQ6IPU0 288 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 SLC9A9Q8IVB4 645 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 SIX5Q8N196 739 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 SLC44A3Q8N4M1 653 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 TOP6BLQ8N6T0 577 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 TMEM105Q8N8V8 129 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 GLIS3Q8NEA6 775 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 SPPL2BQ8TCT7 592 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 ATOH1Q92858 354 aaPredicted RBP15.01□□□□□ -0.01
SEC13-204ENST00000397099 BORCS6Q96GS4 357 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 PHOX2BQ99453 314 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 GTPBP4Q9BZE4 634 aaKnown RBP15.01□□□□□ -0.01
SEC13-204ENST00000397099 ASAH2Q9NR71 780 aa15.01□□□□□ -0.01
SEC13-204ENST00000397099 H0Y858 1186 aa15□□□□□ -0.01
SEC13-204ENST00000397099 PDXKO00764 312 aa15□□□□□ -0.01
SEC13-204ENST00000397099 KLRC4O43908 158 aa15□□□□□ -0.01
SEC13-204ENST00000397099 KRT19P08727 400 aa15□□□□□ -0.01
SEC13-204ENST00000397099 FAM163BP0C2L3 166 aa15□□□□□ -0.01
SEC13-204ENST00000397099 EPHA5P54756 1037 aa15□□□□□ -0.01
SEC13-204ENST00000397099 NTHL1P78549 312 aa15□□□□□ -0.01
SEC13-204ENST00000397099 PFKPQ01813 784 aa15□□□□□ -0.01
SEC13-204ENST00000397099 TWF1Q12792 350 aa15□□□□□ -0.01
SEC13-204ENST00000397099 VEPH1Q14D04 833 aa15□□□□□ -0.01
SEC13-204ENST00000397099 PSMD6Q15008 389 aa15□□□□□ -0.01
SEC13-204ENST00000397099 CBWD2Q8IUF1 395 aa15□□□□□ -0.01
SEC13-204ENST00000397099 NPAS3Q8IXF0 933 aa15□□□□□ -0.01
SEC13-204ENST00000397099 NELFCDQ8IXH7 590 aa15□□□□□ -0.01
SEC13-204ENST00000397099 FSIP1Q8NA03 581 aa15□□□□□ -0.01
SEC13-204ENST00000397099 ST13P5Q8NFI4 369 aaPredicted RBP15□□□□□ -0.01
SEC13-204ENST00000397099 ITFG1Q8TB96 612 aa15□□□□□ -0.01
SEC13-204ENST00000397099 E2F7Q96AV8 911 aa15□□□□□ -0.01
SEC13-204ENST00000397099 ACBD6Q9BR61 282 aa15□□□□□ -0.01
SEC13-204ENST00000397099 CORO1BQ9BR76 489 aa15□□□□□ -0.01
SEC13-204ENST00000397099 MTMR12Q9C0I1 747 aa15□□□□□ -0.01
SEC13-204ENST00000397099 ZCWPW1Q9H0M4 648 aa15□□□□□ -0.01
SEC13-204ENST00000397099 SLC2A4RGQ9NR83 387 aa15□□□□□ -0.01
SEC13-204ENST00000397099 ZMYM5Q9UJ78 669 aa15□□□□□ -0.01
SEC13-204ENST00000397099 HOOK1Q9UJC3 728 aaKnown RBP15□□□□□ -0.01
SEC13-204ENST00000397099 YIPF1Q9Y548 306 aa15□□□□□ -0.01
SEC13-204ENST00000397099 MTMR11A4FU01 709 aa14.99□□□□□ -0.01
SEC13-204ENST00000397099 TULP1O00294 542 aaPredicted RBP14.99□□□□□ -0.01
SEC13-204ENST00000397099 EXOC3O60645 756 aa14.99□□□□□ -0.01
SEC13-204ENST00000397099 ECI2O75521 394 aa14.99□□□□□ -0.01
SEC13-204ENST00000397099 RHOBTB3O94955 611 aa14.99□□□□□ -0.01
SEC13-204ENST00000397099 RPN1P04843 607 aaKnown RBP14.99□□□□□ -0.01
SEC13-204ENST00000397099 TNNI1P19237 187 aa14.99□□□□□ -0.01
SEC13-204ENST00000397099 PCSK1P29120 753 aa14.99□□□□□ -0.01
SEC13-204ENST00000397099 CYP24A1Q07973 514 aa14.99□□□□□ -0.01
SEC13-204ENST00000397099 DUSP4Q13115 394 aa14.99□□□□□ -0.01
SEC13-204ENST00000397099 KCNB1Q14721 858 aa14.99□□□□□ -0.01
SEC13-204ENST00000397099 KMT5BQ4FZB7 885 aa14.99□□□□□ -0.01
SEC13-204ENST00000397099 PRSS36Q5K4E3 855 aa14.99□□□□□ -0.01
SEC13-204ENST00000397099 WSCD1Q658N2 575 aa14.99□□□□□ -0.01
SEC13-204ENST00000397099 KRBA2Q6ZNG9 492 aa14.99□□□□□ -0.01
SEC13-204ENST00000397099 ZSWIM2Q8NEG5 633 aa14.99□□□□□ -0.01
SEC13-204ENST00000397099 SHDQ96IW2 340 aa14.99□□□□□ -0.01
SEC13-204ENST00000397099 RTP3Q9BQQ7 232 aa14.99□□□□□ -0.01
SEC13-204ENST00000397099 HCFC1R1Q9NWW0 138 aa14.99□□□□□ -0.01
SEC13-204ENST00000397099 CA14Q9ULX7 337 aa14.99□□□□□ -0.01
SEC13-204ENST00000397099 NUMBLQ9Y6R0 609 aa14.99□□□□□ -0.01
SEC13-204ENST00000397099 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.98□□□□□ -0.01
SEC13-204ENST00000397099 CALUO43852 315 aaPredicted RBP14.98□□□□□ -0.01
SEC13-204ENST00000397099 ZNF202O95125 648 aa14.98□□□□□ -0.01
SEC13-204ENST00000397099 CASP1P29466 404 aa14.98□□□□□ -0.01
SEC13-204ENST00000397099 CYP2J2P51589 502 aa14.98□□□□□ -0.01
SEC13-204ENST00000397099 BFSP1Q12934 665 aa14.98□□□□□ -0.01
SEC13-204ENST00000397099 STK4Q13043 487 aa14.98□□□□□ -0.01
SEC13-204ENST00000397099 SLC39A12Q504Y0 691 aa14.98□□□□□ -0.01
SEC13-204ENST00000397099 TRAPPC11Q7Z392 1133 aa14.98□□□□□ -0.01
SEC13-204ENST00000397099 GRAMD1CQ8IYS0 662 aa14.98□□□□□ -0.01
SEC13-204ENST00000397099 PDCL2Q8N4E4 241 aa14.98□□□□□ -0.01
SEC13-204ENST00000397099 CXorf38Q8TB03 319 aa14.98□□□□□ -0.01
SEC13-204ENST00000397099 PSMG2Q969U7 264 aa14.98□□□□□ -0.01
SEC13-204ENST00000397099 HPDLQ96IR7 371 aa14.98□□□□□ -0.01
SEC13-204ENST00000397099 PGLYRP2Q96PD5 576 aa14.98□□□□□ -0.01
SEC13-204ENST00000397099 CGRRF1Q99675 332 aa14.98□□□□□ -0.01
SEC13-204ENST00000397099 ABCB6Q9NP58 842 aa14.98□□□□□ -0.01
SEC13-204ENST00000397099 RMND1Q9NWS8 449 aa14.98□□□□□ -0.01
SEC13-204ENST00000397099 PCDHB5Q9Y5E4 795 aa14.98□□□□□ -0.01
SEC13-204ENST00000397099 SNX9Q9Y5X1 595 aa14.98□□□□□ -0.01
SEC13-204ENST00000397099 CLIC2O15247 247 aa14.97□□□□□ -0.01
SEC13-204ENST00000397099 MAPK13O15264 365 aa14.97□□□□□ -0.01
SEC13-204ENST00000397099 STAU1O95793 577 aaKnown RBP14.97□□□□□ -0.01
SEC13-204ENST00000397099 OR4Q2P0C623 313 aa14.97□□□□□ -0.01
SEC13-204ENST00000397099 DLATP10515 647 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms