RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 NOX5Q96PH1 765 aa13.55□□□□□ -0.24
TRIM39-204ENST00000396548 MICAL3Q7RTP6 2002 aa13.55□□□□□ -0.24
TRIM39-204ENST00000396548 ENPP3O14638 875 aa13.55□□□□□ -0.24
TRIM39-204ENST00000396548 THAP12O43422 761 aa13.55□□□□□ -0.24
TRIM39-204ENST00000396548 FGFR1P11362 822 aa13.55□□□□□ -0.24
TRIM39-204ENST00000396548 NDST1P52848 882 aa13.55□□□□□ -0.24
TRIM39-204ENST00000396548 ATN1P54259 1190 aaPredicted RBP13.55□□□□□ -0.24
TRIM39-204ENST00000396548 ZNF394Q53GI3 561 aa13.55□□□□□ -0.24
TRIM39-204ENST00000396548 CLLU1OSQ5K130 101 aa13.55□□□□□ -0.24
TRIM39-204ENST00000396548 PHF13Q86YI8 300 aaPredicted RBP13.55□□□□□ -0.24
TRIM39-204ENST00000396548 MCOLN2Q8IZK6 566 aa13.55□□□□□ -0.24
TRIM39-204ENST00000396548 C3orf58Q8NDZ4 430 aa13.55□□□□□ -0.24
TRIM39-204ENST00000396548 RFFLQ8WZ73 363 aa13.55□□□□□ -0.24
TRIM39-204ENST00000396548 ZNF560Q96MR9 790 aa13.55□□□□□ -0.24
TRIM39-204ENST00000396548 NAPGQ99747 312 aaPredicted RBP13.55□□□□□ -0.24
TRIM39-204ENST00000396548 LHX5Q9H2C1 402 aa13.55□□□□□ -0.24
TRIM39-204ENST00000396548 ABCB6Q9NP58 842 aa13.55□□□□□ -0.24
TRIM39-204ENST00000396548 SEPT11Q9NVA2 429 aaKnown RBP13.55□□□□□ -0.24
TRIM39-204ENST00000396548 MRFAP1Q9Y605 127 aa13.55□□□□□ -0.24
TRIM39-204ENST00000396548 RIOK3O14730 519 aaKnown RBP13.55□□□□□ -0.24
TRIM39-204ENST00000396548 ATP1A1P05023 1023 aaKnown RBP13.55□□□□□ -0.24
TRIM39-204ENST00000396548 FAM163BP0C2L3 166 aa13.55□□□□□ -0.24
TRIM39-204ENST00000396548 TAF6P49848 677 aa13.55□□□□□ -0.24
TRIM39-204ENST00000396548 CLCNKBP51801 687 aa13.55□□□□□ -0.24
TRIM39-204ENST00000396548 TLE2Q04725 743 aa13.55□□□□□ -0.24
TRIM39-204ENST00000396548 ELAC1Q9H777 363 aaKnown RBP13.55□□□□□ -0.24
TRIM39-204ENST00000396548 OSGEPQ9NPF4 335 aa13.55□□□□□ -0.24
TRIM39-204ENST00000396548 CACNG4Q9UBN1 327 aa13.55□□□□□ -0.24
TRIM39-204ENST00000396548 STXBP5LQ9Y2K9 1186 aa13.55□□□□□ -0.24
TRIM39-204ENST00000396548 R3HCC1Q9Y3T6 440 aaKnown RBP13.55□□□□□ -0.24
TRIM39-204ENST00000396548 SNX9Q9Y5X1 595 aa13.55□□□□□ -0.24
TRIM39-204ENST00000396548 CTAGE9A4FU28 777 aa13.54□□□□□ -0.24
TRIM39-204ENST00000396548 PALMO75781 387 aa13.54□□□□□ -0.24
TRIM39-204ENST00000396548 LSM8O95777 96 aaKnown RBP13.54□□□□□ -0.24
TRIM39-204ENST00000396548 RPL9P32969 192 aaKnown RBP13.54□□□□□ -0.24
TRIM39-204ENST00000396548 GPC5P78333 572 aa13.54□□□□□ -0.24
TRIM39-204ENST00000396548 SV2CQ496J9 727 aa13.54□□□□□ -0.24
TRIM39-204ENST00000396548 DBF4BQ8NFT6 615 aa13.54□□□□□ -0.24
TRIM39-204ENST00000396548 CPA5Q8WXQ8 436 aa13.54□□□□□ -0.24
TRIM39-204ENST00000396548 PAAF1Q9BRP4 392 aa13.54□□□□□ -0.24
TRIM39-204ENST00000396548 L1RE1Q9UN81 338 aa13.54□□□□□ -0.24
TRIM39-204ENST00000396548 FNDC1Q4ZHG4 1894 aaPredicted RBP13.54□□□□□ -0.24
TRIM39-204ENST00000396548 GRIK3Q13003 919 aa13.54□□□□□ -0.24
TRIM39-204ENST00000396548 ORC1Q13415 861 aa13.54□□□□□ -0.24
TRIM39-204ENST00000396548 UNC93AQ86WB7 457 aa13.54□□□□□ -0.24
TRIM39-204ENST00000396548 TOP6BLQ8N6T0 577 aa13.54□□□□□ -0.24
TRIM39-204ENST00000396548 APBB2Q92870 758 aa13.54□□□□□ -0.24
TRIM39-204ENST00000396548 HIPK3Q9H422 1215 aa13.54□□□□□ -0.24
TRIM39-204ENST00000396548 CYTH4Q9UIA0 394 aa13.54□□□□□ -0.24
TRIM39-204ENST00000396548 GTF3C4Q9UKN8 822 aa13.54□□□□□ -0.24
TRIM39-204ENST00000396548 JRKLQ9Y4A0 524 aa13.54□□□□□ -0.24
TRIM39-204ENST00000396548 TCRBV5S1A1TA0A578 114 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 B4GALT3O60512 393 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 CAPN2P17655 700 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 ABCB4P21439 1286 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 SSTR3P32745 418 aaPredicted RBP13.53□□□□□ -0.24
TRIM39-204ENST00000396548 MEI1Q5TIA1 1274 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 DPH6Q7L8W6 267 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 CTNNBL1Q8WYA6 563 aaPredicted RBP13.53□□□□□ -0.24
TRIM39-204ENST00000396548 VCPIP1Q96JH7 1222 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 MMS19Q96T76 1030 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 TLR10Q9BXR5 811 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 ZNF518BQ9C0D4 1074 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRIM39-204ENST00000396548 PODXLO00592 558 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 GABRDO14764 452 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 VDRP11473 427 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 MMP8P22894 467 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 WARSP23381 471 aaKnown RBP13.53□□□□□ -0.24
TRIM39-204ENST00000396548 TERF1P54274 439 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 DSC1Q08554 894 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 LRRC26Q2I0M4 334 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 PKDCCQ504Y2 493 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 NAA35Q5VZE5 725 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 DENND1BQ6P3S1 775 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 CALR3Q96L12 384 aaKnown RBP13.53□□□□□ -0.24
TRIM39-204ENST00000396548 RPS6KC1Q96S38 1066 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 AVENQ9NQS1 362 aaPredicted RBP13.53□□□□□ -0.24
TRIM39-204ENST00000396548 KIAA1257Q9ULG3 409 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 ALPK3Q96L96 1907 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 DCDC2CA8MYV0 355 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 O00370 1275 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 ENC1O14682 589 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 PARNO95453 639 aaKnown RBP13.53□□□□□ -0.24
TRIM39-204ENST00000396548 CNGA2Q16280 664 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 UBE2Q1Q7Z7E8 422 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 PASD1Q8IV76 773 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 RHOT2Q8IXI1 618 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 CRYBG2Q8N1P7 616 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 PDCL2Q8N4E4 241 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 SCLYQ96I15 445 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 C11orf49Q9H6J7 331 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 TMEM161AQ9NX61 479 aa13.53□□□□□ -0.24
TRIM39-204ENST00000396548 TTC3P53804 2025 aa13.52□□□□□ -0.24
TRIM39-204ENST00000396548 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.52□□□□□ -0.24
TRIM39-204ENST00000396548 FAM170AA1A519 330 aa13.52□□□□□ -0.24
TRIM39-204ENST00000396548 POMCP01189 267 aa13.52□□□□□ -0.24
TRIM39-204ENST00000396548 PFKMP08237 780 aa13.52□□□□□ -0.24
TRIM39-204ENST00000396548 PRLRP16471 622 aa13.52□□□□□ -0.24
TRIM39-204ENST00000396548 GTF2F1P35269 517 aaKnown RBP eCLIP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms