RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 NCKAP1LP55160 1127 aa18.99■□□□□ 0.63
EXOSC3-202ENST00000396521 ITPRIPL2Q3MIP1 535 aa18.99■□□□□ 0.63
EXOSC3-202ENST00000396521 GPR158Q5T848 1215 aa18.99■□□□□ 0.63
EXOSC3-202ENST00000396521 ARL6IP4Q66PJ3 421 aaKnown RBP18.99■□□□□ 0.63
EXOSC3-202ENST00000396521 GAREM2Q75VX8 874 aa18.99■□□□□ 0.63
EXOSC3-202ENST00000396521 ATAD1Q8NBU5 361 aa18.99■□□□□ 0.63
EXOSC3-202ENST00000396521 BPIFB1Q8TDL5 484 aa18.99■□□□□ 0.63
EXOSC3-202ENST00000396521 CITO14578 2027 aa18.98■□□□□ 0.63
EXOSC3-202ENST00000396521 LACTBL1A8MY62 500 aa18.98■□□□□ 0.63
EXOSC3-202ENST00000396521 OR4Q2P0C623 313 aa18.98■□□□□ 0.63
EXOSC3-202ENST00000396521 PLA2G4BP0C869 781 aa18.98■□□□□ 0.63
EXOSC3-202ENST00000396521 ATP2C1P98194 919 aaPredicted RBP18.98■□□□□ 0.63
EXOSC3-202ENST00000396521 POU5F1Q01860 360 aaKnown RBP18.98■□□□□ 0.63
EXOSC3-202ENST00000396521 ZRSR1Q15695 479 aaKnown RBP18.98■□□□□ 0.63
EXOSC3-202ENST00000396521 ENOX2Q16206 610 aaKnown RBP18.98■□□□□ 0.63
EXOSC3-202ENST00000396521 TAF12Q16514 161 aa18.98■□□□□ 0.63
EXOSC3-202ENST00000396521 IL17AQ16552 155 aa18.98■□□□□ 0.63
EXOSC3-202ENST00000396521 IL31Q6EBC2 164 aa18.98■□□□□ 0.63
EXOSC3-202ENST00000396521 THEM5Q8N1Q8 247 aa18.98■□□□□ 0.63
EXOSC3-202ENST00000396521 SENP8Q96LD8 212 aa18.98■□□□□ 0.63
EXOSC3-202ENST00000396521 AK8Q96MA6 479 aa18.98■□□□□ 0.63
EXOSC3-202ENST00000396521 MKNK1Q9BUB5 465 aa18.98■□□□□ 0.63
EXOSC3-202ENST00000396521 CRISPLD1Q9H336 500 aa18.98■□□□□ 0.63
EXOSC3-202ENST00000396521 RBM12Q9NTZ6 932 aaKnown RBP18.98■□□□□ 0.63
EXOSC3-202ENST00000396521 SLC27A5Q9Y2P5 690 aa18.98■□□□□ 0.63
EXOSC3-202ENST00000396521 NCANO14594 1321 aa18.98■□□□□ 0.63
EXOSC3-202ENST00000396521 CHD8Q9HCK8 2581 aa18.97■□□□□ 0.63
EXOSC3-202ENST00000396521 AKAP3O75969 853 aa18.97■□□□□ 0.63
EXOSC3-202ENST00000396521 DDX6P26196 483 aaKnown RBP eCLIP18.97■□□□□ 0.63
EXOSC3-202ENST00000396521 MCM2P49736 904 aa18.97■□□□□ 0.63
EXOSC3-202ENST00000396521 SPAG1Q07617 926 aa18.97■□□□□ 0.63
EXOSC3-202ENST00000396521 RAD51AP2Q09MP3 1159 aa18.97■□□□□ 0.63
EXOSC3-202ENST00000396521 METTL23Q86XA0 190 aa18.97■□□□□ 0.63
EXOSC3-202ENST00000396521 FAM160A2Q8N612 972 aaPredicted RBP18.97■□□□□ 0.63
EXOSC3-202ENST00000396521 TMEM209Q96SK2 561 aa18.97■□□□□ 0.63
EXOSC3-202ENST00000396521 ASB7Q9H672 318 aa18.97■□□□□ 0.63
EXOSC3-202ENST00000396521 GTSE1Q9NYZ3 720 aa18.97■□□□□ 0.63
EXOSC3-202ENST00000396521 TBX20Q9UMR3 447 aa18.97■□□□□ 0.63
EXOSC3-202ENST00000396521 A0A0B4J269 797 aa18.96■□□□□ 0.63
EXOSC3-202ENST00000396521 ZNF806P0C7X5 589 aa18.96■□□□□ 0.63
EXOSC3-202ENST00000396521 SOX9P48436 509 aa18.96■□□□□ 0.63
EXOSC3-202ENST00000396521 GRSF1Q12849 480 aaKnown RBP eCLIP18.96■□□□□ 0.63
EXOSC3-202ENST00000396521 ST3GAL2Q16842 350 aa18.96■□□□□ 0.63
EXOSC3-202ENST00000396521 HEATR6Q6AI08 1181 aaKnown RBP18.96■□□□□ 0.63
EXOSC3-202ENST00000396521 TXNDC11Q6PKC3 985 aa18.96■□□□□ 0.63
EXOSC3-202ENST00000396521 Q6ZS52 159 aa18.96■□□□□ 0.63
EXOSC3-202ENST00000396521 CACNA2D4Q7Z3S7 1137 aa18.96■□□□□ 0.63
EXOSC3-202ENST00000396521 CAMKK1Q8N5S9 505 aa18.96■□□□□ 0.63
EXOSC3-202ENST00000396521 SPPL2BQ8TCT7 592 aa18.96■□□□□ 0.63
EXOSC3-202ENST00000396521 LRRC3BQ96PB8 259 aa18.96■□□□□ 0.63
EXOSC3-202ENST00000396521 HAPLN2Q9GZV7 340 aa18.96■□□□□ 0.63
EXOSC3-202ENST00000396521 PARVGQ9HBI0 331 aa18.96■□□□□ 0.63
EXOSC3-202ENST00000396521 C2CD2Q9Y426 696 aa18.96■□□□□ 0.63
EXOSC3-202ENST00000396521 PCDHGA5Q9Y5G8 931 aa18.96■□□□□ 0.63
EXOSC3-202ENST00000396521 COL4A2P08572 1712 aa18.96■□□□□ 0.63
EXOSC3-202ENST00000396521 ANO9A1A5B4 782 aa18.95■□□□□ 0.62
EXOSC3-202ENST00000396521 PIRO00625 290 aa18.95■□□□□ 0.62
EXOSC3-202ENST00000396521 FAM189A1O60320 539 aa18.95■□□□□ 0.62
EXOSC3-202ENST00000396521 DMWDQ09019 674 aa18.95■□□□□ 0.62
EXOSC3-202ENST00000396521 PON2Q15165 354 aa18.95■□□□□ 0.62
EXOSC3-202ENST00000396521 STXBP5Q5T5C0 1151 aa18.95■□□□□ 0.62
EXOSC3-202ENST00000396521 C9orf57Q5W0N0 161 aa18.95■□□□□ 0.62
EXOSC3-202ENST00000396521 CMTM8Q8IZV2 173 aa18.95■□□□□ 0.62
EXOSC3-202ENST00000396521 C12orf50Q8NA57 414 aaPredicted RBP18.95■□□□□ 0.62
EXOSC3-202ENST00000396521 GAB3Q8WWW8 586 aa18.95■□□□□ 0.62
EXOSC3-202ENST00000396521 PNMA5Q96PV4 448 aa18.95■□□□□ 0.62
EXOSC3-202ENST00000396521 MSTO1Q9BUK6 570 aa18.95■□□□□ 0.62
EXOSC3-202ENST00000396521 ZCWPW1Q9H0M4 648 aa18.95■□□□□ 0.62
EXOSC3-202ENST00000396521 KIF9Q9HAQ2 790 aa18.95■□□□□ 0.62
EXOSC3-202ENST00000396521 CPSF3Q9UKF6 684 aaKnown RBP18.95■□□□□ 0.62
EXOSC3-202ENST00000396521 CNOT1A5YKK6 2376 aaKnown RBP18.95■□□□□ 0.62
EXOSC3-202ENST00000396521 KRT37O76014 449 aa18.94■□□□□ 0.62
EXOSC3-202ENST00000396521 TNFSF9P41273 254 aa18.94■□□□□ 0.62
EXOSC3-202ENST00000396521 ZNF131P52739 623 aa18.94■□□□□ 0.62
EXOSC3-202ENST00000396521 TMEM132DQ14C87 1099 aa18.94■□□□□ 0.62
EXOSC3-202ENST00000396521 MGAT5BQ3V5L5 792 aa18.94■□□□□ 0.62
EXOSC3-202ENST00000396521 TMEM119Q4V9L6 283 aa18.94■□□□□ 0.62
EXOSC3-202ENST00000396521 ARSHQ5FYA8 562 aa18.94■□□□□ 0.62
EXOSC3-202ENST00000396521 TMEM196Q5HYL7 178 aa18.94■□□□□ 0.62
EXOSC3-202ENST00000396521 JADE1Q6IE81 842 aa18.94■□□□□ 0.62
EXOSC3-202ENST00000396521 SLFN12LQ6IEE8 588 aa18.94■□□□□ 0.62
EXOSC3-202ENST00000396521 CALML4Q96GE6 196 aa18.94■□□□□ 0.62
EXOSC3-202ENST00000396521 CHAMP1Q96JM3 812 aa18.94■□□□□ 0.62
EXOSC3-202ENST00000396521 ZFYVE19Q96K21 471 aa18.94■□□□□ 0.62
EXOSC3-202ENST00000396521 SEPT5Q99719 369 aaPredicted RBP18.94■□□□□ 0.62
EXOSC3-202ENST00000396521 CCSER1Q9C0I3 900 aa18.94■□□□□ 0.62
EXOSC3-202ENST00000396521 SLC8A2Q9UPR5 921 aa18.94■□□□□ 0.62
EXOSC3-202ENST00000396521 TICRRQ7Z2Z1 1910 aa18.94■□□□□ 0.62
EXOSC3-202ENST00000396521 VWA3AA6NCI4 1184 aa18.93■□□□□ 0.62
EXOSC3-202ENST00000396521 TRDMT1O14717 391 aaKnown RBP18.93■□□□□ 0.62
EXOSC3-202ENST00000396521 TRAK2O60296 914 aa18.93■□□□□ 0.62
EXOSC3-202ENST00000396521 RPP40O75818 363 aaKnown RBP18.93■□□□□ 0.62
EXOSC3-202ENST00000396521 FAM13AO94988 1023 aa18.93■□□□□ 0.62
EXOSC3-202ENST00000396521 AVPR1AP37288 418 aa18.93■□□□□ 0.62
EXOSC3-202ENST00000396521 CACNB1Q02641 598 aaPredicted RBP18.93■□□□□ 0.62
EXOSC3-202ENST00000396521 SRSF5Q13243 272 aaKnown RBP18.93■□□□□ 0.62
EXOSC3-202ENST00000396521 FBXO43Q4G163 708 aa18.93■□□□□ 0.62
EXOSC3-202ENST00000396521 AASDHQ4L235 1098 aaPredicted RBP18.93■□□□□ 0.62
EXOSC3-202ENST00000396521 SLC39A12Q504Y0 691 aa18.93■□□□□ 0.62
EXOSC3-202ENST00000396521 WDR44Q5JSH3 913 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms