RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 STX2P32856 288 aa12.23□□□□□ -0.45
PDXDC1-202ENST00000396410 ARSEP51690 589 aa12.23□□□□□ -0.45
PDXDC1-202ENST00000396410 TAS2R40P59535 323 aa12.23□□□□□ -0.45
PDXDC1-202ENST00000396410 GPS1Q13098 491 aa12.23□□□□□ -0.45
PDXDC1-202ENST00000396410 CCNG2Q16589 344 aa12.23□□□□□ -0.45
PDXDC1-202ENST00000396410 ZDHHC24Q6UX98 284 aa12.23□□□□□ -0.45
PDXDC1-202ENST00000396410 GPR20Q99678 358 aa12.23□□□□□ -0.45
PDXDC1-202ENST00000396410 PCSK1NQ9UHG2 260 aa12.23□□□□□ -0.45
PDXDC1-202ENST00000396410 NFS1Q9Y697 457 aa12.23□□□□□ -0.45
PDXDC1-202ENST00000396410 ATAD5Q96QE3 1844 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 DCDC2CA8MYV0 355 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 M0QYV0 167 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 ACKR2O00590 384 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 IL18RAPO95256 599 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 LSM8O95777 96 aaKnown RBP12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 ASS1P00966 412 aaKnown RBP12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 PLCB4Q15147 1175 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 C15orf39Q6ZRI6 1047 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 CCDC197Q8NCU1 140 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 C9orf72Q96LT7 481 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 DDX23Q9BUQ8 820 aaKnown RBP12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 CALN1Q9BXU9 219 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 TRIM6Q9C030 488 aaPredicted RBP12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 PRMT7Q9NVM4 692 aaPredicted RBP12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 KIF13BQ9NQT8 1826 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 NDC80O14777 642 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 ITGB3P05106 788 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 RPL7AP62424 266 aaKnown RBP12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 TMED2Q15363 201 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 HP1BP3Q5SSJ5 553 aaPredicted RBP12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 SCYL2Q6P3W7 929 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 APBB1IPQ7Z5R6 666 aaPredicted RBP12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 HSPH1Q92598 858 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 CFAP57Q96MR6 1250 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 PCYT2Q99447 389 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 PRMT1Q99873 361 aaKnown RBP12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 ROPN1BQ9BZX4 212 aaPredicted RBP12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 HAPLN2Q9GZV7 340 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 ROPN1Q9HAT0 212 aaPredicted RBP12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 SLC26A2P50443 739 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 IFI35P80217 286 aaPredicted RBP12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 LRRC14Q15048 493 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 CYP1B1Q16678 543 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 ATP13A4Q4VNC1 1196 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 KATNAL2Q8IYT4 538 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 ZNF518BQ9C0D4 1074 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 MROH8Q9H579 483 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 POLIQ9UNA4 740 aa12.22□□□□□ -0.45
PDXDC1-202ENST00000396410 YARSP54577 528 aaKnown RBP12.21□□□□□ -0.45
PDXDC1-202ENST00000396410 SMTNL2Q2TAL5 461 aa12.21□□□□□ -0.45
PDXDC1-202ENST00000396410 OR6B2Q6IFH4 312 aa12.21□□□□□ -0.45
PDXDC1-202ENST00000396410 PGM2Q96G03 612 aa12.21□□□□□ -0.45
PDXDC1-202ENST00000396410 EXOC1LA0A1B0GW35 172 aa12.21□□□□□ -0.45
PDXDC1-202ENST00000396410 B4GALT5O43286 388 aa12.21□□□□□ -0.45
PDXDC1-202ENST00000396410 ACO1P21399 889 aaKnown RBP12.21□□□□□ -0.45
PDXDC1-202ENST00000396410 PTK6Q13882 451 aa12.21□□□□□ -0.45
PDXDC1-202ENST00000396410 PLPPR4Q7Z2D5 763 aa12.21□□□□□ -0.45
PDXDC1-202ENST00000396410 C12orf50Q8NA57 414 aaPredicted RBP12.21□□□□□ -0.45
PDXDC1-202ENST00000396410 RBM15Q96T37 977 aaKnown RBP eCLIP12.21□□□□□ -0.456e-7■■■■■ 36.2
PDXDC1-202ENST00000396410 MLXIPLQ9NP71 852 aa12.21□□□□□ -0.45
PDXDC1-202ENST00000396410 IKBKGQ9Y6K9 419 aa12.21□□□□□ -0.45
PDXDC1-202ENST00000396410 F8VP50 259 aa12.21□□□□□ -0.45
PDXDC1-202ENST00000396410 GRIN3BO60391 1043 aa12.21□□□□□ -0.45
PDXDC1-202ENST00000396410 KRT7P08729 469 aa12.21□□□□□ -0.45
PDXDC1-202ENST00000396410 CEP120Q8N960 986 aa12.21□□□□□ -0.45
PDXDC1-202ENST00000396410 CDCA5Q96FF9 252 aa12.21□□□□□ -0.45
PDXDC1-202ENST00000396410 DDX27Q96GQ7 796 aaKnown RBP12.21□□□□□ -0.45
PDXDC1-202ENST00000396410 AGAP1Q9UPQ3 857 aa12.21□□□□□ -0.45
PDXDC1-202ENST00000396410 R3HDM2Q9Y2K5 976 aaKnown RBP12.21□□□□□ -0.45
PDXDC1-202ENST00000396410 PSME4Q14997 1843 aa12.21□□□□□ -0.46
PDXDC1-202ENST00000396410 SNAPC2Q13487 334 aa12.21□□□□□ -0.46
PDXDC1-202ENST00000396410 PLEKHA7Q6IQ23 1121 aa12.21□□□□□ -0.46
PDXDC1-202ENST00000396410 GDAP1Q8TB36 358 aa12.21□□□□□ -0.46
PDXDC1-202ENST00000396410 DNAI2Q9GZS0 605 aa12.21□□□□□ -0.46
PDXDC1-202ENST00000396410 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.21□□□□□ -0.46
PDXDC1-202ENST00000396410 A0A087WZ62 844 aa12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 GOLGA8MH3BSY2 632 aa12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 ARIH2O95376 493 aa12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 GH1P01241 217 aa12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 STAG3L1P0CL83 205 aa12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 INSRRP14616 1297 aa12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 KRT81Q14533 505 aa12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 ZBTB10Q96DT7 871 aa12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 CPB2Q96IY4 423 aa12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 SEC16BQ96JE7 1060 aa12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 FDXACB1Q9BRP7 624 aaPredicted RBP12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 EFCC1Q9HA90 598 aa12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 PHIPQ8WWQ0 1821 aa12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 CNTNAP2Q9UHC6 1331 aa12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 TTLL13PA6NNM8 815 aa12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 TRAPPC3O43617 180 aa12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 MSCO60682 206 aa12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 ATP2A2P16615 1042 aaKnown RBP12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 CHKAP35790 457 aa12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 CDH8P55286 799 aa12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 LAMC2Q13753 1193 aa12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 CDO1Q16878 200 aa12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 MFSD7Q6UXD7 560 aa12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 SPOCD1Q6ZMY3 1216 aa12.2□□□□□ -0.46
PDXDC1-202ENST00000396410 SRRM1Q8IYB3 904 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms