RNA–Protein interactions for RNA: ENST00000396394.6

PSMA1-201, Transcript of proteasome subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMA1, Length 1,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-201ENST00000396394 TBX20Q9UMR3 447 aa13.79□□□□□ -0.2
PSMA1-201ENST00000396394 TDRD15B5MCY1 1934 aaKnown RBP13.78□□□□□ -0.2
PSMA1-201ENST00000396394 ANO9A1A5B4 782 aa13.78□□□□□ -0.2
PSMA1-201ENST00000396394 TMEM189-UBE2V1I3L0A0 370 aa13.78□□□□□ -0.2
PSMA1-201ENST00000396394 EIF3DO15371 548 aaKnown RBP eCLIP13.78□□□□□ -0.2
PSMA1-201ENST00000396394 TEX28O15482 410 aa13.78□□□□□ -0.2
PSMA1-201ENST00000396394 CALUO43852 315 aaPredicted RBP13.78□□□□□ -0.2
PSMA1-201ENST00000396394 TBCAO75347 108 aaKnown RBP13.78□□□□□ -0.2
PSMA1-201ENST00000396394 PIGRP01833 764 aa13.78□□□□□ -0.2
PSMA1-201ENST00000396394 KCNE1P15382 129 aa13.78□□□□□ -0.2
PSMA1-201ENST00000396394 RPL13P26373 211 aaKnown RBP13.78□□□□□ -0.2
PSMA1-201ENST00000396394 MTHFRP42898 656 aa13.78□□□□□ -0.2
PSMA1-201ENST00000396394 VAV2P52735 878 aa13.78□□□□□ -0.2
PSMA1-201ENST00000396394 OSTNP61366 133 aa13.78□□□□□ -0.2
PSMA1-201ENST00000396394 SPA17Q15506 151 aa13.78□□□□□ -0.2
PSMA1-201ENST00000396394 KYAT1Q16773 422 aa13.78□□□□□ -0.2
PSMA1-201ENST00000396394 ASTE1Q2TB18 679 aaPredicted RBP13.78□□□□□ -0.2
PSMA1-201ENST00000396394 CCDC40Q4G0X9 1142 aa13.78□□□□□ -0.2
PSMA1-201ENST00000396394 ATAT1Q5SQI0 421 aa13.78□□□□□ -0.2
PSMA1-201ENST00000396394 ELMSAN1Q6PJG2 1045 aa13.78□□□□□ -0.2
PSMA1-201ENST00000396394 DCLRE1AQ6PJP8 1040 aa13.78□□□□□ -0.2
PSMA1-201ENST00000396394 CEP120Q8N960 986 aa13.78□□□□□ -0.2
PSMA1-201ENST00000396394 HDAC7Q8WUI4 952 aa13.78□□□□□ -0.2
PSMA1-201ENST00000396394 ZBTB45Q96K62 511 aaPredicted RBP13.78□□□□□ -0.2
PSMA1-201ENST00000396394 FBXL18Q96ME1 805 aa13.78□□□□□ -0.2
PSMA1-201ENST00000396394 RIPOR3Q96MK2 946 aa13.78□□□□□ -0.2
PSMA1-201ENST00000396394 MMRN2Q9H8L6 949 aa13.78□□□□□ -0.2
PSMA1-201ENST00000396394 SFXN1Q9H9B4 322 aa13.78□□□□□ -0.2
PSMA1-201ENST00000396394 METTL14Q9HCE5 456 aaKnown RBP13.78□□□□□ -0.2
PSMA1-201ENST00000396394 CNTN3Q9P232 1028 aa13.78□□□□□ -0.2
PSMA1-201ENST00000396394 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.78□□□□□ -0.2
PSMA1-201ENST00000396394 K7ENM7 598 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 SLC16A3O15427 465 aaKnown RBP13.77□□□□□ -0.21
PSMA1-201ENST00000396394 PJA2O43164 708 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 DCXO43602 365 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 GPR37L1O60883 481 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 ZRANB2O95218 330 aaKnown RBP eCLIP13.77□□□□□ -0.21
PSMA1-201ENST00000396394 KIF4AO95239 1232 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 ABL1P00519 1130 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 GTF2BQ00403 316 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 UPP1Q16831 310 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 GLRA4Q5JXX5 417 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 CCDC122Q5T0U0 273 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 PDXDC1Q6P996 788 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 RNF135Q8IUD6 432 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 TMEM174Q8WUU8 243 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 BICD1Q96G01 975 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 DDX27Q96GQ7 796 aaKnown RBP13.77□□□□□ -0.21
PSMA1-201ENST00000396394 SNX27Q96L92 541 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 FIZ1Q96SL8 496 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 TTPALQ9BTX7 342 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 APOL5Q9BWW9 433 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 FGFBP2Q9BYJ0 223 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 ST6GALNAC4Q9H4F1 302 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 PLEKHA5Q9HAU0 1116 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 PLCB1Q9NQ66 1216 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 ARHGAP20Q9P2F6 1191 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 ANKFY1Q9P2R3 1169 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 CACNG4Q9UBN1 327 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 MYO6Q9UM54 1294 aa13.77□□□□□ -0.21
PSMA1-201ENST00000396394 TRAPPC3O43617 180 aa13.76□□□□□ -0.21
PSMA1-201ENST00000396394 B3GAT3O94766 335 aa13.76□□□□□ -0.21
PSMA1-201ENST00000396394 NOL4O94818 638 aa13.76□□□□□ -0.21
PSMA1-201ENST00000396394 GLUD1P00367 558 aa13.76□□□□□ -0.21
PSMA1-201ENST00000396394 PRLRP16471 622 aa13.76□□□□□ -0.21
PSMA1-201ENST00000396394 HOXD13P35453 343 aa13.76□□□□□ -0.21
PSMA1-201ENST00000396394 LIG4P49917 911 aa13.76□□□□□ -0.21
PSMA1-201ENST00000396394 CLCN6P51797 869 aa13.76□□□□□ -0.21
PSMA1-201ENST00000396394 CLCNKBP51801 687 aa13.76□□□□□ -0.21
PSMA1-201ENST00000396394 KIF5AQ12840 1032 aa13.76□□□□□ -0.21
PSMA1-201ENST00000396394 BRD3Q15059 726 aa13.76□□□□□ -0.21
PSMA1-201ENST00000396394 C15orf39Q6ZRI6 1047 aa13.76□□□□□ -0.21
PSMA1-201ENST00000396394 TRAPPC11Q7Z392 1133 aa13.76□□□□□ -0.21
PSMA1-201ENST00000396394 KIAA1328Q86T90 577 aa13.76□□□□□ -0.21
PSMA1-201ENST00000396394 HNRNPLLQ8WVV9 542 aaKnown RBP13.76□□□□□ -0.21
PSMA1-201ENST00000396394 RIN2Q8WYP3 895 aaPredicted RBP13.76□□□□□ -0.21
PSMA1-201ENST00000396394 JAKMIP2Q96AA8 810 aa13.76□□□□□ -0.21
PSMA1-201ENST00000396394 RPGRIP1Q96KN7 1286 aa13.76□□□□□ -0.21
PSMA1-201ENST00000396394 ZHX3Q9H4I2 956 aa13.76□□□□□ -0.21
PSMA1-201ENST00000396394 FAM207AQ9NSI2 230 aaPredicted RBP13.76□□□□□ -0.21
PSMA1-201ENST00000396394 ZNF446Q9NWS9 450 aa13.76□□□□□ -0.21
PSMA1-201ENST00000396394 AIPL1Q9NZN9 384 aa13.76□□□□□ -0.21
PSMA1-201ENST00000396394 FBXL5Q9UKA1 691 aa13.76□□□□□ -0.21
PSMA1-201ENST00000396394 GUCA1BQ9UMX6 200 aa13.76□□□□□ -0.21
PSMA1-201ENST00000396394 NR2E1Q9Y466 385 aa13.76□□□□□ -0.21
PSMA1-201ENST00000396394 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.76□□□□□ -0.21
PSMA1-201ENST00000396394 UBE4BO95155 1302 aa13.76□□□□□ -0.21
PSMA1-201ENST00000396394 HNRNPDLO14979 420 aaKnown RBP13.75□□□□□ -0.21
PSMA1-201ENST00000396394 EPHB6O15197 1021 aa13.75□□□□□ -0.21
PSMA1-201ENST00000396394 CLTAP09496 248 aa13.75□□□□□ -0.21
PSMA1-201ENST00000396394 RPL9P32969 192 aaKnown RBP13.75□□□□□ -0.21
PSMA1-201ENST00000396394 MATR3P43243 847 aaKnown RBP eCLIP13.75□□□□□ -0.21
PSMA1-201ENST00000396394 MYBPC2Q14324 1141 aa13.75□□□□□ -0.21
PSMA1-201ENST00000396394 SLC10A6Q3KNW5 377 aa13.75□□□□□ -0.21
PSMA1-201ENST00000396394 TMEM31Q5JXX7 168 aa13.75□□□□□ -0.21
PSMA1-201ENST00000396394 RTP2Q5QGT7 225 aa13.75□□□□□ -0.21
PSMA1-201ENST00000396394 RARS2Q5T160 578 aaKnown RBP13.75□□□□□ -0.21
PSMA1-201ENST00000396394 FAM171A1Q5VUB5 890 aa13.75□□□□□ -0.21
PSMA1-201ENST00000396394 TMCO3Q6UWJ1 677 aa13.75□□□□□ -0.21
PSMA1-201ENST00000396394 RRAGAQ7L523 313 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms