RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 C1RP00736 705 aa20.58■□□□□ 0.89
HOXA9-202ENST00000396345 SRGAP2BP0DMP2 458 aa20.58■□□□□ 0.89
HOXA9-202ENST00000396345 P4HA1P13674 534 aa20.58■□□□□ 0.89
HOXA9-202ENST00000396345 EPCAMP16422 314 aa20.58■□□□□ 0.89
HOXA9-202ENST00000396345 CETN1Q12798 172 aa20.58■□□□□ 0.89
HOXA9-202ENST00000396345 KCNC3Q14003 757 aa20.58■□□□□ 0.89
HOXA9-202ENST00000396345 KCNJ12Q14500 433 aa20.58■□□□□ 0.89
HOXA9-202ENST00000396345 SPOPLQ6IQ16 392 aa20.58■□□□□ 0.89
HOXA9-202ENST00000396345 TMEM184AQ6ZMB5 413 aa20.58■□□□□ 0.89
HOXA9-202ENST00000396345 AOPEPQ8N6M6 819 aa20.58■□□□□ 0.89
HOXA9-202ENST00000396345 SPATA18Q8TC71 538 aa20.58■□□□□ 0.89
HOXA9-202ENST00000396345 CASP10Q92851 521 aa20.58■□□□□ 0.89
HOXA9-202ENST00000396345 HLA-CQ95604 372 aa20.58■□□□□ 0.89
HOXA9-202ENST00000396345 FANCLQ9NW38 375 aa20.58■□□□□ 0.89
HOXA9-202ENST00000396345 PLXNA3P51805 1871 aa20.58■□□□□ 0.88
HOXA9-202ENST00000396345 BRWD1Q9NSI6 2320 aa20.58■□□□□ 0.88
HOXA9-202ENST00000396345 P4HA2O15460 535 aa20.57■□□□□ 0.88
HOXA9-202ENST00000396345 TGM5O43548 720 aa20.57■□□□□ 0.88
HOXA9-202ENST00000396345 FAM163BP0C2L3 166 aa20.57■□□□□ 0.88
HOXA9-202ENST00000396345 LHX1P48742 406 aa20.57■□□□□ 0.88
HOXA9-202ENST00000396345 ZNF165P49910 485 aa20.57■□□□□ 0.88
HOXA9-202ENST00000396345 NOP14P78316 857 aaKnown RBP20.57■□□□□ 0.88
HOXA9-202ENST00000396345 ROR1Q01973 937 aa20.57■□□□□ 0.88
HOXA9-202ENST00000396345 WDR44Q5JSH3 913 aa20.57■□□□□ 0.88
HOXA9-202ENST00000396345 CDKAL1Q5VV42 579 aa20.57■□□□□ 0.88
HOXA9-202ENST00000396345 LILRA6Q6PI73 481 aa20.57■□□□□ 0.88
HOXA9-202ENST00000396345 OSTM1Q86WC4 334 aa20.57■□□□□ 0.88
HOXA9-202ENST00000396345 RTP3Q9BQQ7 232 aa20.57■□□□□ 0.88
HOXA9-202ENST00000396345 UBE2ZQ9H832 354 aaPredicted RBP20.57■□□□□ 0.88
HOXA9-202ENST00000396345 APOBEC3GQ9HC16 384 aaKnown RBP20.57■□□□□ 0.88
HOXA9-202ENST00000396345 COG5Q9UP83 839 aa20.57■□□□□ 0.88
HOXA9-202ENST00000396345 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.56■□□□□ 0.88
HOXA9-202ENST00000396345 LRRN2O75325 713 aa20.56■□□□□ 0.88
HOXA9-202ENST00000396345 TACC1O75410 805 aa20.56■□□□□ 0.88
HOXA9-202ENST00000396345 SPATA31D3P0C874 917 aa20.56■□□□□ 0.88
HOXA9-202ENST00000396345 CPB1P15086 417 aa20.56■□□□□ 0.88
HOXA9-202ENST00000396345 WARSP23381 471 aaKnown RBP20.56■□□□□ 0.88
HOXA9-202ENST00000396345 EEF1GP26641 437 aaKnown RBP20.56■□□□□ 0.88
HOXA9-202ENST00000396345 LTBRP36941 435 aa20.56■□□□□ 0.88
HOXA9-202ENST00000396345 MAN2A1Q16706 1144 aa20.56■□□□□ 0.88
HOXA9-202ENST00000396345 TCP11X2Q5H9J9 407 aa20.56■□□□□ 0.88
HOXA9-202ENST00000396345 SCARA5Q6ZMJ2 495 aa20.56■□□□□ 0.88
HOXA9-202ENST00000396345 SPATA31D4Q6ZUB0 917 aa20.56■□□□□ 0.88
HOXA9-202ENST00000396345 OR10T2Q8NGX3 314 aa20.56■□□□□ 0.88
HOXA9-202ENST00000396345 KBTBD7Q8WVZ9 684 aa20.56■□□□□ 0.88
HOXA9-202ENST00000396345 MRPL45Q9BRJ2 306 aaKnown RBP20.56■□□□□ 0.88
HOXA9-202ENST00000396345 TUBGCP2Q9BSJ2 902 aa20.56■□□□□ 0.88
HOXA9-202ENST00000396345 SNX25Q9H3E2 840 aa20.56■□□□□ 0.88
HOXA9-202ENST00000396345 SMYD3Q9H7B4 428 aa20.56■□□□□ 0.88
HOXA9-202ENST00000396345 PRDM6Q9NQX0 595 aa20.56■□□□□ 0.88
HOXA9-202ENST00000396345 DDX43Q9NXZ2 648 aaKnown RBP20.56■□□□□ 0.88
HOXA9-202ENST00000396345 DPP7Q9UHL4 492 aa20.56■□□□□ 0.88
HOXA9-202ENST00000396345 BARX2Q9UMQ3 279 aaPredicted RBP20.56■□□□□ 0.88
HOXA9-202ENST00000396345 WDR27A2RRH5 827 aa20.55■□□□□ 0.88
HOXA9-202ENST00000396345 SMTNL1A8MU46 457 aa20.55■□□□□ 0.88
HOXA9-202ENST00000396345 GABRDO14764 452 aa20.55■□□□□ 0.88
HOXA9-202ENST00000396345 TBX10O75333 385 aa20.55■□□□□ 0.88
HOXA9-202ENST00000396345 ABLIM3O94929 683 aa20.55■□□□□ 0.88
HOXA9-202ENST00000396345 OR4Q2P0C623 313 aa20.55■□□□□ 0.88
HOXA9-202ENST00000396345 PRKCSHP14314 528 aaPredicted RBP20.55■□□□□ 0.88
HOXA9-202ENST00000396345 CDH8P55286 799 aa20.55■□□□□ 0.88
HOXA9-202ENST00000396345 DLX2Q07687 328 aaPredicted RBP20.55■□□□□ 0.88
HOXA9-202ENST00000396345 NCAPHQ15003 741 aa20.55■□□□□ 0.88
HOXA9-202ENST00000396345 TPGS2Q68CL5 300 aa20.55■□□□□ 0.88
HOXA9-202ENST00000396345 ELMSAN1Q6PJG2 1045 aa20.55■□□□□ 0.88
HOXA9-202ENST00000396345 KREMEN2Q8NCW0 462 aa20.55■□□□□ 0.88
HOXA9-202ENST00000396345 ZNF461Q8TAF7 563 aa20.55■□□□□ 0.88
HOXA9-202ENST00000396345 HDAC7Q8WUI4 952 aa20.55■□□□□ 0.88
HOXA9-202ENST00000396345 TMEM209Q96SK2 561 aa20.55■□□□□ 0.88
HOXA9-202ENST00000396345 ACBD6Q9BR61 282 aa20.55■□□□□ 0.88
HOXA9-202ENST00000396345 MAN1C1Q9NR34 630 aa20.55■□□□□ 0.88
HOXA9-202ENST00000396345 DZANK1Q9NVP4 752 aa20.55■□□□□ 0.88
HOXA9-202ENST00000396345 CLEC1BQ9P126 229 aa20.55■□□□□ 0.88
HOXA9-202ENST00000396345 UNC80Q8N2C7 3258 aa20.54■□□□□ 0.88
HOXA9-202ENST00000396345 SPDYE4A6NLX3 237 aa20.54■□□□□ 0.88
HOXA9-202ENST00000396345 KCNA5P22460 613 aa20.54■□□□□ 0.88
HOXA9-202ENST00000396345 PCSK1P29120 753 aa20.54■□□□□ 0.88
HOXA9-202ENST00000396345 GNL1P36915 607 aaPredicted RBP20.54■□□□□ 0.88
HOXA9-202ENST00000396345 ASPAP45381 313 aa20.54■□□□□ 0.88
HOXA9-202ENST00000396345 RAP1GAPP47736 663 aa20.54■□□□□ 0.88
HOXA9-202ENST00000396345 TSPY1Q01534 308 aa20.54■□□□□ 0.88
HOXA9-202ENST00000396345 GPR17Q13304 367 aa20.54■□□□□ 0.88
HOXA9-202ENST00000396345 VWA3BQ502W6 1294 aa20.54■□□□□ 0.88
HOXA9-202ENST00000396345 ANKRD54Q6NXT1 300 aa20.54■□□□□ 0.88
HOXA9-202ENST00000396345 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.54■□□□□ 0.88
HOXA9-202ENST00000396345 DHX40Q8IX18 779 aaKnown RBP20.54■□□□□ 0.88
HOXA9-202ENST00000396345 OR6B3Q8NGW1 331 aa20.54■□□□□ 0.88
HOXA9-202ENST00000396345 NIF3L1Q9GZT8 377 aa20.54■□□□□ 0.88
HOXA9-202ENST00000396345 ZCWPW1Q9H0M4 648 aa20.54■□□□□ 0.88
HOXA9-202ENST00000396345 PLEKHA4Q9H4M7 779 aa20.54■□□□□ 0.88
HOXA9-202ENST00000396345 FBXW11Q9UKB1 542 aa20.54■□□□□ 0.88
HOXA9-202ENST00000396345 MTCL1Q9Y4B5 1905 aaKnown RBP20.54■□□□□ 0.88
HOXA9-202ENST00000396345 BECN2A8MW95 431 aa20.53■□□□□ 0.88
HOXA9-202ENST00000396345 CAVIN2O95810 425 aa20.53■□□□□ 0.88
HOXA9-202ENST00000396345 PDGFRBP09619 1106 aa20.53■□□□□ 0.88
HOXA9-202ENST00000396345 WEE2P0C1S8 567 aa20.53■□□□□ 0.88
HOXA9-202ENST00000396345 CDK11BP21127 795 aaKnown RBP20.53■□□□□ 0.88
HOXA9-202ENST00000396345 ACAT1P24752 427 aaKnown RBP20.53■□□□□ 0.88
HOXA9-202ENST00000396345 LMO2P25791 158 aa20.53■□□□□ 0.88
HOXA9-202ENST00000396345 SLC39A12Q504Y0 691 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms