RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 A0A087X0T9 212 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 DENND3A2RUS2 1198 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 ZSCAN5CA6NGD5 496 aaPredicted RBP5.7□□□□□ -1.5
VPS41-203ENST00000395969 PDHXO00330 501 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 OGTO15294 1046 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 DDX3YO15523 660 aaKnown RBP5.7□□□□□ -1.5
VPS41-203ENST00000395969 ZNF189O75820 626 aaPredicted RBP5.7□□□□□ -1.5
VPS41-203ENST00000395969 MOCS3O95396 460 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 VNN1O95497 513 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 FAM228BP0C875 321 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 MYZAPP0CAP1 466 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 HPDP32754 393 aaPredicted RBP5.7□□□□□ -1.5
VPS41-203ENST00000395969 HSD17B3P37058 310 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 MATR3P43243 847 aaKnown RBP eCLIP5.7□□□□□ -1.5
VPS41-203ENST00000395969 CNTN2Q02246 1040 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 CYP27A1Q02318 531 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 ZNF844Q08AG5 666 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 PPP1R7Q15435 360 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 UAP1Q16222 522 aaPredicted RBP5.7□□□□□ -1.5
VPS41-203ENST00000395969 MPZL3Q6UWV2 235 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 RRAGAQ7L523 313 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 GPR142Q7Z601 462 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 PLEKHH3Q7Z736 793 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 PIGWQ7Z7B1 504 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 C11orf96Q7Z7L8 435 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 NT5DC3Q86UY8 548 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 ZFAND2BQ8WV99 257 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 SLC7A3Q8WY07 619 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 ZNF516Q92618 1163 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 ZNF317Q96PQ6 595 aaPredicted RBP5.7□□□□□ -1.5
VPS41-203ENST00000395969 SLITRK6Q9H5Y7 841 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 MLXIPQ9HAP2 919 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 RAB20Q9NX57 234 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 L3MBTL1Q9Y468 752 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 NRCAMQ92823 1304 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 GOLGA6L10A6NI86 522 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 EVI5O60447 810 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 KCNE1P15382 129 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 CCND1P24385 295 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 TMOD1P28289 359 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 TCF7P36402 384 aaPredicted RBP5.69□□□□□ -1.5
VPS41-203ENST00000395969 GRM5P41594 1212 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 POLR2FP61218 127 aaKnown RBP5.69□□□□□ -1.5
VPS41-203ENST00000395969 ROR2Q01974 943 aaKnown RBP5.69□□□□□ -1.5
VPS41-203ENST00000395969 GUCY2DQ02846 1103 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 KIAA0753Q2KHM9 967 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 CFAP221Q4G0U5 840 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 ERMARDQ5T6L9 678 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 CST9Q5W186 159 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 SLC30A9Q6PML9 568 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 RUFY4Q6ZNE9 571 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 APLFQ8IW19 511 aaPredicted RBP5.69□□□□□ -1.5
VPS41-203ENST00000395969 TEX9Q8N6V9 391 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 CCDC63Q8NA47 563 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 FAM161BQ96MY7 647 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 PTPN18Q99952 460 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 CBWD1Q9BRT8 395 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 FAM167BQ9BTA0 163 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 TXLNGYQ9BZA5 131 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 XYLT2Q9H1B5 865 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 DNAJC12Q9UKB3 198 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 PCDHB2Q9Y5E7 798 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 ESYT3A0FGR9 886 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 LUC7L3O95232 432 aaKnown RBP5.69□□□□□ -1.5
VPS41-203ENST00000395969 ALDH1A1P00352 501 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 MMP3P08254 477 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 NEFHP12036 1026 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 EIF4BP23588 611 aaKnown RBP5.69□□□□□ -1.5
VPS41-203ENST00000395969 CXCR5P32302 372 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 CTNNA1P35221 906 aaKnown RBP5.69□□□□□ -1.5
VPS41-203ENST00000395969 PAPOLAP51003 745 aaKnown RBP5.69□□□□□ -1.5
VPS41-203ENST00000395969 GUCY2FP51841 1108 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 GJA9P57773 515 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 KLHL30Q0D2K2 578 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 LAMTOR4Q0VGL1 99 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 FSTL1Q12841 308 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 DRAP1Q14919 205 aaPredicted RBP5.69□□□□□ -1.5
VPS41-203ENST00000395969 CLEC16AQ2KHT3 1053 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 MAP3K21Q5TCX8 1036 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 PLEKHA7Q6IQ23 1121 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 ACAD10Q6JQN1 1059 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 MTHFD1LQ6UB35 978 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 SYDE1Q6ZW31 735 aaPredicted RBP5.69□□□□□ -1.5
VPS41-203ENST00000395969 BNIPLQ7Z465 357 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 MAATS1Q7Z4T9 603 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 C2orf69Q8N8R5 385 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 SLC43A3Q8NBI5 491 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 SLC10A4Q96EP9 437 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 CHMP6Q96FZ7 201 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 APBA2Q99767 749 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 PPP1R12CQ9BZL4 782 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 WNT8AQ9H1J5 351 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.69□□□□□ -1.5
VPS41-203ENST00000395969 CNTN3Q9P232 1028 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 ZFATQ9P243 1243 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 SALL4Q9UJQ4 1053 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 GPR32O75388 356 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 FAM155BO75949 473 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 LGALS2P05162 132 aa5.69□□□□□ -1.5
VPS41-203ENST00000395969 H2AFZP0C0S5 128 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms