RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 IFNEQ86WN2 208 aa17.78■□□□□ 0.44
SREBF1-203ENST00000395751 EPAS1Q99814 870 aa17.78■□□□□ 0.44
SREBF1-203ENST00000395751 NOL6Q9H6R4 1146 aaKnown RBP17.78■□□□□ 0.44
SREBF1-203ENST00000395751 SAC3D1A6NKF1 404 aa17.78■□□□□ 0.44
SREBF1-203ENST00000395751 UPP2O95045 317 aa17.78■□□□□ 0.44
SREBF1-203ENST00000395751 VCAM1P19320 739 aa17.78■□□□□ 0.44
SREBF1-203ENST00000395751 MAP3K10Q02779 954 aa17.78■□□□□ 0.44
SREBF1-203ENST00000395751 ITGADQ13349 1161 aa17.78■□□□□ 0.44
SREBF1-203ENST00000395751 FASTKD1Q53R41 847 aaKnown RBP17.78■□□□□ 0.44
SREBF1-203ENST00000395751 CEP170P1Q96L14 293 aa17.78■□□□□ 0.44
SREBF1-203ENST00000395751 ZNF180Q9UJW8 692 aa17.78■□□□□ 0.44
SREBF1-203ENST00000395751 NRXN1Q9ULB1 1477 aa17.78■□□□□ 0.44
SREBF1-203ENST00000395751 NPHP3-ACAD11A0A0J9YXS1 232 aa17.78■□□□□ 0.44
SREBF1-203ENST00000395751 TPST1O60507 370 aa17.78■□□□□ 0.44
SREBF1-203ENST00000395751 EIF2S1P05198 315 aaKnown RBP17.78■□□□□ 0.44
SREBF1-203ENST00000395751 LYNP07948 512 aa17.78■□□□□ 0.44
SREBF1-203ENST00000395751 CCDC130P13994 396 aa17.78■□□□□ 0.44
SREBF1-203ENST00000395751 CDK8P49336 464 aa17.78■□□□□ 0.44
SREBF1-203ENST00000395751 TRADDQ15628 312 aa17.78■□□□□ 0.44
SREBF1-203ENST00000395751 TTC27Q6P3X3 843 aa17.78■□□□□ 0.44
SREBF1-203ENST00000395751 GJB7Q6PEY0 223 aa17.78■□□□□ 0.44
SREBF1-203ENST00000395751 NT5DC3Q86UY8 548 aa17.78■□□□□ 0.44
SREBF1-203ENST00000395751 CDKL3Q8IVW4 592 aaPredicted RBP17.78■□□□□ 0.44
SREBF1-203ENST00000395751 TUBGCP3Q96CW5 907 aa17.78■□□□□ 0.44
SREBF1-203ENST00000395751 KIAA1586Q9HCI6 787 aa17.78■□□□□ 0.44
SREBF1-203ENST00000395751 DNAAF2Q9NVR5 837 aaKnown RBP17.78■□□□□ 0.44
SREBF1-203ENST00000395751 KIF1BO60333 1816 aa17.78■□□□□ 0.44
SREBF1-203ENST00000395751 TAF4O00268 1085 aa17.77■□□□□ 0.44
SREBF1-203ENST00000395751 USP1O94782 785 aa17.77■□□□□ 0.44
SREBF1-203ENST00000395751 ACTR2P61160 394 aa17.77■□□□□ 0.44
SREBF1-203ENST00000395751 NTRK3Q16288 839 aa17.77■□□□□ 0.44
SREBF1-203ENST00000395751 TMTC4Q5T4D3 741 aa17.77■□□□□ 0.44
SREBF1-203ENST00000395751 DCP1AQ9NPI6 582 aaPredicted RBP17.77■□□□□ 0.44
SREBF1-203ENST00000395751 MADDQ8WXG6 1647 aa17.77■□□□□ 0.44
SREBF1-203ENST00000395751 TBKBP1A7MCY6 615 aa17.77■□□□□ 0.44
SREBF1-203ENST00000395751 TBXAS1P24557 533 aaPredicted RBP17.77■□□□□ 0.44
SREBF1-203ENST00000395751 DRG2P55039 364 aaKnown RBP17.77■□□□□ 0.44
SREBF1-203ENST00000395751 FOXO4P98177 505 aa17.77■□□□□ 0.44
SREBF1-203ENST00000395751 RRP1BQ14684 758 aaKnown RBP17.77■□□□□ 0.44
SREBF1-203ENST00000395751 DHDDSQ86SQ9 333 aa17.77■□□□□ 0.44
SREBF1-203ENST00000395751 TCP10LQ8TDR4 215 aa17.77■□□□□ 0.44
SREBF1-203ENST00000395751 MRPS26Q9BYN8 205 aaKnown RBP17.77■□□□□ 0.44
SREBF1-203ENST00000395751 DDX3XO00571 662 aaKnown RBP eCLIP17.77■□□□□ 0.43
SREBF1-203ENST00000395751 ATP5BP06576 529 aaKnown RBP17.77■□□□□ 0.43
SREBF1-203ENST00000395751 CAPN1P07384 714 aa17.77■□□□□ 0.43
SREBF1-203ENST00000395751 PBX1P40424 430 aa17.77■□□□□ 0.43
SREBF1-203ENST00000395751 EXOC3L1Q86VI1 746 aa17.77■□□□□ 0.43
SREBF1-203ENST00000395751 FRMD8Q9BZ67 464 aaPredicted RBP17.77■□□□□ 0.43
SREBF1-203ENST00000395751 SCN3BQ9NY72 215 aa17.77■□□□□ 0.43
SREBF1-203ENST00000395751 WDR35Q9P2L0 1181 aa17.77■□□□□ 0.43
SREBF1-203ENST00000395751 CHORDC1Q9UHD1 332 aaPredicted RBP17.77■□□□□ 0.43
SREBF1-203ENST00000395751 NMT1P30419 496 aaKnown RBP17.77■□□□□ 0.43
SREBF1-203ENST00000395751 HABP4Q5JVS0 413 aaKnown RBP17.77■□□□□ 0.43
SREBF1-203ENST00000395751 MROH9Q5TGP6 573 aa17.77■□□□□ 0.43
SREBF1-203ENST00000395751 PADI6Q6TGC4 694 aa17.77■□□□□ 0.43
SREBF1-203ENST00000395751 SH3RF1Q7Z6J0 888 aa17.77■□□□□ 0.43
SREBF1-203ENST00000395751 INPP4AQ96PE3 977 aaPredicted RBP17.77■□□□□ 0.43
SREBF1-203ENST00000395751 DUSP9Q99956 384 aaKnown RBP17.77■□□□□ 0.43
SREBF1-203ENST00000395751 HMG20AQ9NP66 347 aa17.77■□□□□ 0.43
SREBF1-203ENST00000395751 NINJ2Q9NZG7 142 aa17.77■□□□□ 0.43
SREBF1-203ENST00000395751 KLHL8Q9P2G9 620 aaPredicted RBP17.77■□□□□ 0.43
SREBF1-203ENST00000395751 PRR36Q9H6K5 1346 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 RARAP10276 462 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 CCDC85BQ15834 202 aaPredicted RBP17.76■□□□□ 0.43
SREBF1-203ENST00000395751 NDUFA5Q16718 116 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 AASDHQ4L235 1098 aaPredicted RBP17.76■□□□□ 0.43
SREBF1-203ENST00000395751 SIX5Q8N196 739 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 ZFAND2BQ8WV99 257 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 EXT2Q93063 718 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 VPS50Q96JG6 964 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 ZBTB39O15060 712 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 GSNP06396 782 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 IGBP1P78318 339 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 ZNF618Q5T7W0 954 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 SLC5A4Q9NY91 659 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 DMTF1Q9Y222 760 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 DNAJC16Q9Y2G8 782 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 USP17L15C9J2P7 530 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 USP17L13C9JLJ4 530 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 USP17L11C9JVI0 530 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 USP17L18D6R9N7 530 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 USP17L22D6RA61 530 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 USP17L17D6RBQ6 530 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 USP17L19D6RCP7 530 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 USP17L20D6RJB6 530 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 ZBTB5O15062 677 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 IMPDH2P12268 514 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 CDH2P19022 906 aaPredicted RBP17.76■□□□□ 0.43
SREBF1-203ENST00000395751 STAT3P40763 770 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 CDH6P55285 790 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 USP17L24Q0WX57 530 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 TCHHL1Q5QJ38 904 aaPredicted RBP17.76■□□□□ 0.43
SREBF1-203ENST00000395751 USP17L6PQ6QN14 398 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 ASAP3Q8TDY4 903 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 EML4Q9HC35 981 aaKnown RBP17.76■□□□□ 0.43
SREBF1-203ENST00000395751 KIF17Q9P2E2 1029 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 RSL24D1Q9UHA3 163 aaKnown RBP17.76■□□□□ 0.43
SREBF1-203ENST00000395751 ZNF804BA4D1E1 1349 aa17.76■□□□□ 0.43
SREBF1-203ENST00000395751 GTPBP10A4D1E9 387 aaKnown RBP17.75■□□□□ 0.43
SREBF1-203ENST00000395751 MATN2O00339 956 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms