RNA–Protein interactions for RNA: ENST00000395601.7

SNTB1-201, Transcript of syntrophin beta 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNTB1, Length 5,164 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-201ENST00000395601 PFDN4Q9NQP4 134 aa18.62■□□□□ 0.57
SNTB1-201ENST00000395601 KRT82Q9NSB4 513 aa18.62■□□□□ 0.57
SNTB1-201ENST00000395601 A6NNZ2 444 aa18.62■□□□□ 0.57
SNTB1-201ENST00000395601 TISP43B9A030 160 aa18.62■□□□□ 0.57
SNTB1-201ENST00000395601 CD52P31358 61 aa18.62■□□□□ 0.57
SNTB1-201ENST00000395601 PTPN11Q06124 597 aaPredicted RBP18.62■□□□□ 0.57
SNTB1-201ENST00000395601 TUBB8Q3ZCM7 444 aa18.62■□□□□ 0.57
SNTB1-201ENST00000395601 TMEM161BQ8NDZ6 487 aa18.62■□□□□ 0.57
SNTB1-201ENST00000395601 FEZF2Q8TBJ5 459 aa18.62■□□□□ 0.57
SNTB1-201ENST00000395601 DDX20Q9UHI6 824 aaKnown RBP18.62■□□□□ 0.57
SNTB1-201ENST00000395601 LYPLA2O95372 231 aa18.62■□□□□ 0.57
SNTB1-201ENST00000395601 CYP11B1P15538 503 aa18.62■□□□□ 0.57
SNTB1-201ENST00000395601 ICAM3P32942 547 aa18.62■□□□□ 0.57
SNTB1-201ENST00000395601 ARL4CP56559 192 aa18.62■□□□□ 0.57
SNTB1-201ENST00000395601 ST8SIA6P61647 398 aa18.62■□□□□ 0.57
SNTB1-201ENST00000395601 GTF2BQ00403 316 aa18.62■□□□□ 0.57
SNTB1-201ENST00000395601 PID1Q7Z2X4 250 aa18.62■□□□□ 0.57
SNTB1-201ENST00000395601 PCGF5Q86SE9 256 aa18.62■□□□□ 0.57
SNTB1-201ENST00000395601 CHSY1Q86X52 802 aa18.62■□□□□ 0.57
SNTB1-201ENST00000395601 PARD3BQ8TEW8 1205 aa18.62■□□□□ 0.57
SNTB1-201ENST00000395601 DPP7Q9UHL4 492 aa18.62■□□□□ 0.57
SNTB1-201ENST00000395601 ST3GAL5Q9UNP4 418 aa18.62■□□□□ 0.57
SNTB1-201ENST00000395601 STRCP1A6NGW2 1772 aa18.61■□□□□ 0.57
SNTB1-201ENST00000395601 GTPBP10A4D1E9 387 aaKnown RBP18.61■□□□□ 0.57
SNTB1-201ENST00000395601 EEF2KO00418 725 aaKnown RBP18.61■□□□□ 0.57
SNTB1-201ENST00000395601 WNT7AO00755 349 aa18.61■□□□□ 0.57
SNTB1-201ENST00000395601 GJB1P08034 283 aa18.61■□□□□ 0.57
SNTB1-201ENST00000395601 PAMP19021 973 aa18.61■□□□□ 0.57
SNTB1-201ENST00000395601 JAG1P78504 1218 aa18.61■□□□□ 0.57
SNTB1-201ENST00000395601 RNPC3Q96LT9 517 aaKnown RBP18.61■□□□□ 0.57
SNTB1-201ENST00000395601 GSTA1P08263 222 aa18.61■□□□□ 0.57
SNTB1-201ENST00000395601 GSTA2P09210 222 aa18.61■□□□□ 0.57
SNTB1-201ENST00000395601 SMPD1P17405 629 aa18.61■□□□□ 0.57
SNTB1-201ENST00000395601 SCNN1GP51170 649 aa18.61■□□□□ 0.57
SNTB1-201ENST00000395601 CDKAL1Q5VV42 579 aa18.61■□□□□ 0.57
SNTB1-201ENST00000395601 SH3RF1Q7Z6J0 888 aa18.61■□□□□ 0.57
SNTB1-201ENST00000395601 C1orf54Q8WWF1 131 aa18.61■□□□□ 0.57
SNTB1-201ENST00000395601 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.61■□□□□ 0.57
SNTB1-201ENST00000395601 TLK1Q9UKI8 766 aa18.61■□□□□ 0.57
SNTB1-201ENST00000395601 MLH1P40692 756 aa18.61■□□□□ 0.57
SNTB1-201ENST00000395601 PTENP60484 403 aa18.61■□□□□ 0.57
SNTB1-201ENST00000395601 TATDN2Q93075 761 aa18.61■□□□□ 0.57
SNTB1-201ENST00000395601 DYRK4Q9NR20 520 aa18.61■□□□□ 0.57
SNTB1-201ENST00000395601 PLAGL2Q9UPG8 496 aa18.61■□□□□ 0.57
SNTB1-201ENST00000395601 MMEP08473 750 aa18.61■□□□□ 0.57
SNTB1-201ENST00000395601 CHRNA3P32297 505 aa18.61■□□□□ 0.57
SNTB1-201ENST00000395601 EPHB3P54753 998 aa18.61■□□□□ 0.57
SNTB1-201ENST00000395601 TEPSINQ96N21 525 aa18.61■□□□□ 0.57
SNTB1-201ENST00000395601 CYP4F11Q9HBI6 524 aa18.61■□□□□ 0.57
SNTB1-201ENST00000395601 NOC2LQ9Y3T9 749 aaKnown RBP18.61■□□□□ 0.57
SNTB1-201ENST00000395601 MAP3K7CLP57077 242 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 APBA1Q02410 837 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 RASAL3Q86YV0 1011 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 ASIC4Q96FT7 647 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 BARX2Q9UMQ3 279 aaPredicted RBP18.6■□□□□ 0.57
SNTB1-201ENST00000395601 HES2Q9Y543 173 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 COL1A2P08123 1366 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 USP27XA6NNY8 438 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 GPR25O00155 361 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 EIF3EP60228 445 aaKnown RBP18.6■□□□□ 0.57
SNTB1-201ENST00000395601 FSTL1Q12841 308 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 CUL1Q13616 776 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 RAD9BQ6WBX8 426 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 DDX53Q86TM3 631 aaKnown RBP18.6■□□□□ 0.57
SNTB1-201ENST00000395601 NUDCD1Q96RS6 583 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 DDX47Q9H0S4 455 aaKnown RBP18.6■□□□□ 0.57
SNTB1-201ENST00000395601 DDIT4Q9NX09 232 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 TRPM5Q9NZQ8 1165 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 MOSPD1Q9UJG1 213 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 UMODL1Q5DID0 1318 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 CASP5P51878 434 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 CCDC6Q16204 474 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 UBE2Q2Q8WVN8 375 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 LENG1Q96BZ8 264 aaPredicted RBP18.6■□□□□ 0.57
SNTB1-201ENST00000395601 DNAJC19Q96DA6 116 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 HIPK3Q9H422 1215 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 SMIM35A0A1B0GVV1 85 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 KPNA7A9QM74 516 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 GNRH1P01148 92 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 CKMP06732 381 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 DEPDC1BQ8WUY9 529 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 SAYSD1Q9NPB0 183 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 RNF19AQ9NV58 838 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 CHORDC1Q9UHD1 332 aaPredicted RBP18.6■□□□□ 0.57
SNTB1-201ENST00000395601 GTF3C4Q9UKN8 822 aa18.6■□□□□ 0.57
SNTB1-201ENST00000395601 NDUFAB1O14561 156 aa18.59■□□□□ 0.57
SNTB1-201ENST00000395601 ACAT1P24752 427 aaKnown RBP18.59■□□□□ 0.57
SNTB1-201ENST00000395601 GLE1Q53GS7 698 aaKnown RBP18.59■□□□□ 0.57
SNTB1-201ENST00000395601 MIB1Q86YT6 1006 aa18.59■□□□□ 0.57
SNTB1-201ENST00000395601 MUC3BQ9H195 1237 aa18.59■□□□□ 0.57
SNTB1-201ENST00000395601 LRRIQ3A6PVS8 624 aaPredicted RBP18.59■□□□□ 0.57
SNTB1-201ENST00000395601 KLRC2P26717 231 aa18.59■□□□□ 0.57
SNTB1-201ENST00000395601 IL31Q6EBC2 164 aa18.59■□□□□ 0.57
SNTB1-201ENST00000395601 MMTAG2Q9BU76 263 aaKnown RBP18.59■□□□□ 0.57
SNTB1-201ENST00000395601 GRID2IPA4D2P6 1211 aa18.59■□□□□ 0.57
SNTB1-201ENST00000395601 GOLGA8MH3BSY2 632 aa18.59■□□□□ 0.57
SNTB1-201ENST00000395601 M0QYT0 321 aa18.59■□□□□ 0.57
SNTB1-201ENST00000395601 ATP1A1P05023 1023 aaKnown RBP18.59■□□□□ 0.57
SNTB1-201ENST00000395601 NDST1P52848 882 aa18.59■□□□□ 0.57
SNTB1-201ENST00000395601 GPS1Q13098 491 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms