RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 TAF3Q5VWG9 929 aa20.58■□□□□ 0.88
LMNB1-202ENST00000395354 AGMOQ6ZNB7 445 aa20.58■□□□□ 0.88
LMNB1-202ENST00000395354 SLC35G2Q8TBE7 412 aa20.58■□□□□ 0.88
LMNB1-202ENST00000395354 HERVK_113Q902F9 699 aa20.58■□□□□ 0.88
LMNB1-202ENST00000395354 LRFN2Q9ULH4 789 aa20.58■□□□□ 0.88
LMNB1-202ENST00000395354 PCDHB4Q9Y5E5 795 aa20.58■□□□□ 0.88
LMNB1-202ENST00000395354 SRGAP2O75044 1071 aa20.57■□□□□ 0.88
LMNB1-202ENST00000395354 RECQL4O94761 1208 aa20.57■□□□□ 0.88
LMNB1-202ENST00000395354 YWHAEP62258 255 aaKnown RBP20.57■□□□□ 0.88
LMNB1-202ENST00000395354 MLLT1Q03111 559 aaPredicted RBP20.57■□□□□ 0.88
LMNB1-202ENST00000395354 SLC10A6Q3KNW5 377 aa20.57■□□□□ 0.88
LMNB1-202ENST00000395354 TEX35Q5T0J7 233 aa20.57■□□□□ 0.88
LMNB1-202ENST00000395354 PPP1R2P3Q6NXS1 205 aa20.57■□□□□ 0.88
LMNB1-202ENST00000395354 TRIM72Q6ZMU5 477 aa20.57■□□□□ 0.88
LMNB1-202ENST00000395354 CREG2Q8IUH2 290 aa20.57■□□□□ 0.88
LMNB1-202ENST00000395354 CRIPAKQ8N1N5 446 aa20.57■□□□□ 0.88
LMNB1-202ENST00000395354 THAP2Q9H0W7 228 aa20.57■□□□□ 0.88
LMNB1-202ENST00000395354 PLEKHA5Q9HAU0 1116 aa20.57■□□□□ 0.88
LMNB1-202ENST00000395354 UBN1Q9NPG3 1134 aa20.57■□□□□ 0.88
LMNB1-202ENST00000395354 KLK14Q9P0G3 267 aa20.57■□□□□ 0.88
LMNB1-202ENST00000395354 C2CD2Q9Y426 696 aa20.57■□□□□ 0.88
LMNB1-202ENST00000395354 UPP2O95045 317 aa20.56■□□□□ 0.88
LMNB1-202ENST00000395354 ABCB4P21439 1286 aa20.56■□□□□ 0.88
LMNB1-202ENST00000395354 ATICP31939 592 aa20.56■□□□□ 0.88
LMNB1-202ENST00000395354 DEFB103AP81534 67 aa20.56■□□□□ 0.88
LMNB1-202ENST00000395354 CLEC16AQ2KHT3 1053 aa20.56■□□□□ 0.88
LMNB1-202ENST00000395354 ACAD10Q6JQN1 1059 aa20.56■□□□□ 0.88
LMNB1-202ENST00000395354 DNAAF5Q86Y56 855 aa20.56■□□□□ 0.88
LMNB1-202ENST00000395354 NPAS4Q8IUM7 802 aa20.56■□□□□ 0.88
LMNB1-202ENST00000395354 TOP1MTQ969P6 601 aa20.56■□□□□ 0.88
LMNB1-202ENST00000395354 ELMO3Q96BJ8 720 aa20.56■□□□□ 0.88
LMNB1-202ENST00000395354 XYLT2Q9H1B5 865 aa20.56■□□□□ 0.88
LMNB1-202ENST00000395354 CXXC1Q9P0U4 656 aaPredicted RBP20.56■□□□□ 0.88
LMNB1-202ENST00000395354 GIT1Q9Y2X7 761 aa20.56■□□□□ 0.88
LMNB1-202ENST00000395354 DERAQ9Y315 318 aa20.56■□□□□ 0.88
LMNB1-202ENST00000395354 ANK1P16157 1881 aa20.56■□□□□ 0.88
LMNB1-202ENST00000395354 MEFVO15553 781 aaPredicted RBP20.55■□□□□ 0.88
LMNB1-202ENST00000395354 MTA2O94776 668 aa20.55■□□□□ 0.88
LMNB1-202ENST00000395354 FTCDO95954 541 aa20.55■□□□□ 0.88
LMNB1-202ENST00000395354 ZNF132P52740 706 aa20.55■□□□□ 0.88
LMNB1-202ENST00000395354 ZNF699Q32M78 642 aa20.55■□□□□ 0.88
LMNB1-202ENST00000395354 RBBP8NLQ8NC74 664 aaPredicted RBP20.55■□□□□ 0.88
LMNB1-202ENST00000395354 MMS19Q96T76 1030 aa20.55■□□□□ 0.88
LMNB1-202ENST00000395354 GDF15Q99988 308 aa20.55■□□□□ 0.88
LMNB1-202ENST00000395354 MTIF3Q9H2K0 278 aaKnown RBP20.55■□□□□ 0.88
LMNB1-202ENST00000395354 VRTNQ9H8Y1 702 aa20.55■□□□□ 0.88
LMNB1-202ENST00000395354 RSAD1Q9HA92 442 aa20.55■□□□□ 0.88
LMNB1-202ENST00000395354 ACP6Q9NPH0 428 aa20.55■□□□□ 0.88
LMNB1-202ENST00000395354 NCK2O43639 380 aa20.55■□□□□ 0.88
LMNB1-202ENST00000395354 NFICP08651 508 aa20.55■□□□□ 0.88
LMNB1-202ENST00000395354 FGFR1P11362 822 aa20.55■□□□□ 0.88
LMNB1-202ENST00000395354 RPS6KA1Q15418 735 aa20.55■□□□□ 0.88
LMNB1-202ENST00000395354 JADE1Q6IE81 842 aa20.55■□□□□ 0.88
LMNB1-202ENST00000395354 TMEM270Q6UE05 265 aa20.55■□□□□ 0.88
LMNB1-202ENST00000395354 ALKAL1Q6UXT8 129 aa20.55■□□□□ 0.88
LMNB1-202ENST00000395354 ARHGEF26Q96DR7 871 aa20.55■□□□□ 0.88
LMNB1-202ENST00000395354 TRIM11Q96F44 468 aa20.55■□□□□ 0.88
LMNB1-202ENST00000395354 GAD1Q99259 594 aa20.55■□□□□ 0.88
LMNB1-202ENST00000395354 UBE2OQ9C0C9 1292 aaKnown RBP20.55■□□□□ 0.88
LMNB1-202ENST00000395354 FAM124BQ9H5Z6 455 aaPredicted RBP20.55■□□□□ 0.88
LMNB1-202ENST00000395354 ABCB6Q9NP58 842 aa20.55■□□□□ 0.88
LMNB1-202ENST00000395354 GTF3C4Q9UKN8 822 aa20.55■□□□□ 0.88
LMNB1-202ENST00000395354 STXBP5LQ9Y2K9 1186 aa20.55■□□□□ 0.88
LMNB1-202ENST00000395354 MYH10P35580 1976 aa20.54■□□□□ 0.88
LMNB1-202ENST00000395354 CITO14578 2027 aa20.54■□□□□ 0.88
LMNB1-202ENST00000395354 ARL5CA6NH57 179 aa20.54■□□□□ 0.88
LMNB1-202ENST00000395354 ZNF185O15231 689 aa20.54■□□□□ 0.88
LMNB1-202ENST00000395354 KIF4AO95239 1232 aa20.54■□□□□ 0.88
LMNB1-202ENST00000395354 CYP1A2P05177 515 aa20.54■□□□□ 0.88
LMNB1-202ENST00000395354 TUBBP07437 444 aa20.54■□□□□ 0.88
LMNB1-202ENST00000395354 PAFAH1B1P43034 410 aa20.54■□□□□ 0.88
LMNB1-202ENST00000395354 TMEM132DQ14C87 1099 aa20.54■□□□□ 0.88
LMNB1-202ENST00000395354 C9orf50Q5SZB4 431 aa20.54■□□□□ 0.88
LMNB1-202ENST00000395354 FAM117BQ6P1L5 589 aa20.54■□□□□ 0.88
LMNB1-202ENST00000395354 GLB1LQ6UWU2 654 aa20.54■□□□□ 0.88
LMNB1-202ENST00000395354 TMCO2Q7Z6W1 182 aaPredicted RBP20.54■□□□□ 0.88
LMNB1-202ENST00000395354 DAAM2Q86T65 1068 aa20.54■□□□□ 0.88
LMNB1-202ENST00000395354 C1orf127Q8N9H9 656 aa20.54■□□□□ 0.88
LMNB1-202ENST00000395354 COG1Q8WTW3 980 aa20.54■□□□□ 0.88
LMNB1-202ENST00000395354 PBKQ96KB5 322 aa20.54■□□□□ 0.88
LMNB1-202ENST00000395354 CAPZA3Q96KX2 299 aa20.54■□□□□ 0.88
LMNB1-202ENST00000395354 SNX27Q96L92 541 aa20.54■□□□□ 0.88
LMNB1-202ENST00000395354 ZFP42Q96MM3 310 aa20.54■□□□□ 0.88
LMNB1-202ENST00000395354 CXCL16Q9H2A7 254 aa20.54■□□□□ 0.88
LMNB1-202ENST00000395354 SIX4Q9UIU6 781 aa20.54■□□□□ 0.88
LMNB1-202ENST00000395354 ITGA11Q9UKX5 1188 aa20.54■□□□□ 0.88
LMNB1-202ENST00000395354 SLC4A7Q9Y6M7 1214 aa20.54■□□□□ 0.88
LMNB1-202ENST00000395354 HOXA2O43364 376 aa20.53■□□□□ 0.88
LMNB1-202ENST00000395354 CLSTN1O94985 981 aa20.53■□□□□ 0.88
LMNB1-202ENST00000395354 STAU1O95793 577 aaKnown RBP20.53■□□□□ 0.88
LMNB1-202ENST00000395354 CYP1A1P04798 512 aaPredicted RBP20.53■□□□□ 0.88
LMNB1-202ENST00000395354 MYBL1P10243 752 aa20.53■□□□□ 0.88
LMNB1-202ENST00000395354 UNGP13051 313 aaPredicted RBP20.53■□□□□ 0.88
LMNB1-202ENST00000395354 H2AFXP16104 143 aaPredicted RBP20.53■□□□□ 0.88
LMNB1-202ENST00000395354 GNA15P30679 374 aa20.53■□□□□ 0.88
LMNB1-202ENST00000395354 MLH1P40692 756 aa20.53■□□□□ 0.88
LMNB1-202ENST00000395354 RBM10P98175 930 aaKnown RBP20.53■□□□□ 0.88
LMNB1-202ENST00000395354 SHHQ15465 462 aa20.53■□□□□ 0.88
LMNB1-202ENST00000395354 XKR4Q5GH76 650 aa20.53■□□□□ 0.88
LMNB1-202ENST00000395354 CLLU1OSQ5K130 101 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms