RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 TMEM8AQ9HCN3 771 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 DACH1Q9UI36 760 aa21.38■■□□□ 1.01
SNCA-203ENST00000394986 OR6C75A6NL08 312 aa21.37■■□□□ 1.01
SNCA-203ENST00000394986 MBTPS2O43462 519 aa21.37■■□□□ 1.01
SNCA-203ENST00000394986 STAU1O95793 577 aaKnown RBP21.37■■□□□ 1.01
SNCA-203ENST00000394986 IL9P15248 144 aa21.37■■□□□ 1.01
SNCA-203ENST00000394986 HOXB8P17481 243 aaPredicted RBP21.37■■□□□ 1.01
SNCA-203ENST00000394986 ACAT1P24752 427 aaKnown RBP21.37■■□□□ 1.01
SNCA-203ENST00000394986 TNNC1P63316 161 aa21.37■■□□□ 1.01
SNCA-203ENST00000394986 SMAD4Q13485 552 aaKnown RBP21.37■■□□□ 1.01
SNCA-203ENST00000394986 AAK1Q2M2I8 961 aa21.37■■□□□ 1.01
SNCA-203ENST00000394986 KRT39Q6A163 491 aa21.37■■□□□ 1.01
SNCA-203ENST00000394986 SASS6Q6UVJ0 657 aa21.37■■□□□ 1.01
SNCA-203ENST00000394986 RNF19BQ6ZMZ0 732 aa21.37■■□□□ 1.01
SNCA-203ENST00000394986 C11orf57Q6ZUT1 292 aaPredicted RBP21.37■■□□□ 1.01
SNCA-203ENST00000394986 LIMS2Q7Z4I7 341 aa21.37■■□□□ 1.01
SNCA-203ENST00000394986 KBTBD7Q8WVZ9 684 aa21.37■■□□□ 1.01
SNCA-203ENST00000394986 PGLYRP2Q96PD5 576 aa21.37■■□□□ 1.01
SNCA-203ENST00000394986 SFXN1Q9H9B4 322 aa21.37■■□□□ 1.01
SNCA-203ENST00000394986 METTL14Q9HCE5 456 aaKnown RBP21.37■■□□□ 1.01
SNCA-203ENST00000394986 DDX43Q9NXZ2 648 aaKnown RBP21.37■■□□□ 1.01
SNCA-203ENST00000394986 USP15Q9Y4E8 981 aaPredicted RBP21.37■■□□□ 1.01
SNCA-203ENST00000394986 ABLIM3O94929 683 aa21.36■■□□□ 1.01
SNCA-203ENST00000394986 C8AP07357 584 aa21.36■■□□□ 1.01
SNCA-203ENST00000394986 GTF2H1P32780 548 aa21.36■■□□□ 1.01
SNCA-203ENST00000394986 KLHL40Q2TBA0 621 aa21.36■■□□□ 1.01
SNCA-203ENST00000394986 THEM5Q8N1Q8 247 aa21.36■■□□□ 1.01
SNCA-203ENST00000394986 TMEM86AQ8N2M4 240 aa21.36■■□□□ 1.01
SNCA-203ENST00000394986 ZNF461Q8TAF7 563 aa21.36■■□□□ 1.01
SNCA-203ENST00000394986 SLC7A14Q8TBB6 771 aa21.36■■□□□ 1.01
SNCA-203ENST00000394986 SEMA4DQ92854 862 aa21.36■■□□□ 1.01
SNCA-203ENST00000394986 MRPL45Q9BRJ2 306 aaKnown RBP21.36■■□□□ 1.01
SNCA-203ENST00000394986 PLEKHA4Q9H4M7 779 aa21.36■■□□□ 1.01
SNCA-203ENST00000394986 SMYD3Q9H7B4 428 aa21.36■■□□□ 1.01
SNCA-203ENST00000394986 SEC24AO95486 1093 aa21.35■■□□□ 1.01
SNCA-203ENST00000394986 VNN2O95498 520 aa21.35■■□□□ 1.01
SNCA-203ENST00000394986 ERCC5P28715 1186 aaPredicted RBP21.35■■□□□ 1.01
SNCA-203ENST00000394986 RAP1GAPP47736 663 aa21.35■■□□□ 1.01
SNCA-203ENST00000394986 TPD52L1Q16890 204 aaPredicted RBP21.35■■□□□ 1.01
SNCA-203ENST00000394986 CCDC142Q17RM4 750 aa21.35■■□□□ 1.01
SNCA-203ENST00000394986 SLC39A12Q504Y0 691 aa21.35■■□□□ 1.01
SNCA-203ENST00000394986 ZNF667Q5HYK9 610 aa21.35■■□□□ 1.01
SNCA-203ENST00000394986 LIN9Q5TKA1 542 aa21.35■■□□□ 1.01
SNCA-203ENST00000394986 TRIM59Q8IWR1 403 aa21.35■■□□□ 1.01
SNCA-203ENST00000394986 ZCWPW1Q9H0M4 648 aa21.35■■□□□ 1.01
SNCA-203ENST00000394986 VRTNQ9H8Y1 702 aa21.35■■□□□ 1.01
SNCA-203ENST00000394986 APOBEC3GQ9HC16 384 aaKnown RBP21.35■■□□□ 1.01
SNCA-203ENST00000394986 CCDC195A0A1B0GUA6 201 aa21.34■■□□□ 1.01
SNCA-203ENST00000394986 STX10O60499 249 aa21.34■■□□□ 1.01
SNCA-203ENST00000394986 ZMYND10O75800 440 aa21.34■■□□□ 1.01
SNCA-203ENST00000394986 C1RP00736 705 aa21.34■■□□□ 1.01
SNCA-203ENST00000394986 ASS1P00966 412 aaKnown RBP21.34■■□□□ 1.01
SNCA-203ENST00000394986 ADCY1Q08828 1119 aa21.34■■□□□ 1.01
SNCA-203ENST00000394986 STX1AQ16623 288 aa21.34■■□□□ 1.01
SNCA-203ENST00000394986 SGSM1Q2NKQ1 1148 aa21.34■■□□□ 1.01
SNCA-203ENST00000394986 HSP90AA4PQ58FG1 418 aa21.34■■□□□ 1.01
SNCA-203ENST00000394986 LRRTM3Q86VH5 581 aa21.34■■□□□ 1.01
SNCA-203ENST00000394986 IRF2BP1Q8IU81 584 aa21.34■■□□□ 1.01
SNCA-203ENST00000394986 CREBRFQ8IUR6 639 aa21.34■■□□□ 1.01
SNCA-203ENST00000394986 HDAC7Q8WUI4 952 aa21.34■■□□□ 1.01
SNCA-203ENST00000394986 CNOT6LQ96LI5 555 aaKnown RBP21.34■■□□□ 1.01
SNCA-203ENST00000394986 OXCT2Q9BYC2 517 aaPredicted RBP21.34■■□□□ 1.01
SNCA-203ENST00000394986 ADAM7Q9H2U9 754 aa21.34■■□□□ 1.01
SNCA-203ENST00000394986 CRISPLD1Q9H336 500 aa21.34■■□□□ 1.01
SNCA-203ENST00000394986 CYP4F11Q9HBI6 524 aa21.34■■□□□ 1.01
SNCA-203ENST00000394986 AFF4Q9UHB7 1163 aaKnown RBP21.34■■□□□ 1.01
SNCA-203ENST00000394986 DPP7Q9UHL4 492 aa21.34■■□□□ 1.01
SNCA-203ENST00000394986 NME7Q9Y5B8 376 aa21.34■■□□□ 1.01
SNCA-203ENST00000394986 GABRDO14764 452 aa21.33■■□□□ 1.01
SNCA-203ENST00000394986 FGFR1OPO95684 399 aaKnown RBP21.33■■□□□ 1.01
SNCA-203ENST00000394986 GNA14O95837 355 aa21.33■■□□□ 1.01
SNCA-203ENST00000394986 BMP1P13497 986 aa21.33■■□□□ 1.01
SNCA-203ENST00000394986 ATF2P15336 505 aa21.33■■□□□ 1.01
SNCA-203ENST00000394986 LMO2P25791 158 aa21.33■■□□□ 1.01
SNCA-203ENST00000394986 CDH8P55286 799 aa21.33■■□□□ 1.01
SNCA-203ENST00000394986 MARSP56192 900 aaKnown RBP21.33■■□□□ 1.01
SNCA-203ENST00000394986 NOP14P78316 857 aaKnown RBP21.33■■□□□ 1.01
SNCA-203ENST00000394986 TYRO3Q06418 890 aa21.33■■□□□ 1.01
SNCA-203ENST00000394986 GPR17Q13304 367 aa21.33■■□□□ 1.01
SNCA-203ENST00000394986 TJAP1Q5JTD0 557 aa21.33■■□□□ 1.01
SNCA-203ENST00000394986 TPGS2Q68CL5 300 aa21.33■■□□□ 1.01
SNCA-203ENST00000394986 ELMSAN1Q6PJG2 1045 aa21.33■■□□□ 1.01
SNCA-203ENST00000394986 DPH6Q7L8W6 267 aa21.33■■□□□ 1.01
SNCA-203ENST00000394986 TTC9BQ8N6N2 239 aa21.33■■□□□ 1.01
SNCA-203ENST00000394986 FBXL13Q8NEE6 735 aa21.33■■□□□ 1.01
SNCA-203ENST00000394986 SUSD6Q92537 303 aa21.33■■□□□ 1.01
SNCA-203ENST00000394986 ZNF707Q96C28 371 aaPredicted RBP21.33■■□□□ 1.01
SNCA-203ENST00000394986 SDCBP2Q9H190 292 aa21.33■■□□□ 1.01
SNCA-203ENST00000394986 TMLHEQ9NVH6 421 aa21.33■■□□□ 1.01
SNCA-203ENST00000394986 ANO10Q9NW15 660 aa21.33■■□□□ 1.01
SNCA-203ENST00000394986 MTMR11A4FU01 709 aa21.32■■□□□ 1
SNCA-203ENST00000394986 PDGFRBP09619 1106 aa21.32■■□□□ 1
SNCA-203ENST00000394986 PTMSP20962 102 aa21.32■■□□□ 1
SNCA-203ENST00000394986 WARSP23381 471 aaKnown RBP21.32■■□□□ 1
SNCA-203ENST00000394986 ELF1P32519 619 aa21.32■■□□□ 1
SNCA-203ENST00000394986 LHX1P48742 406 aa21.32■■□□□ 1
SNCA-203ENST00000394986 FMO5P49326 533 aa21.32■■□□□ 1
SNCA-203ENST00000394986 MYL7Q01449 175 aa21.32■■□□□ 1
SNCA-203ENST00000394986 ITIH3Q06033 890 aa21.32■■□□□ 1
SNCA-203ENST00000394986 SMAD2Q15796 467 aaKnown RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms