RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 ELOVL4Q9GZR5 314 aa16■□□□□ 0.15
GPC3-202ENST00000394299 FAM114A2Q9NRY5 505 aa16■□□□□ 0.15
GPC3-202ENST00000394299 PARVAQ9NVD7 372 aa16■□□□□ 0.15
GPC3-202ENST00000394299 PCYOX1Q9UHG3 505 aa16■□□□□ 0.15
GPC3-202ENST00000394299 ATP8A1Q9Y2Q0 1164 aa16■□□□□ 0.15
GPC3-202ENST00000394299 A0A1B0GUA9 196 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 OPA1O60313 960 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 RALAP11233 206 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 CYP2B6P20813 491 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 ADCY2Q08462 1091 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 DHX34Q14147 1143 aaKnown RBP15.99■□□□□ 0.15
GPC3-202ENST00000394299 CEP85LQ5SZL2 805 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 RUFY4Q6ZNE9 571 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 TMC3Q7Z5M5 1100 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 OSMRQ99650 979 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 RAB17Q9H0T7 212 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 MRPL47Q9HD33 250 aaKnown RBP15.99■□□□□ 0.15
GPC3-202ENST00000394299 GRHL1Q9NZI5 618 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 TCRBV5S1A1TA0A578 114 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 FAM187AA6NFU0 413 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 TMEM191CA6NGB0 347 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 H0YGN5 161 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 GOLGA8SH3BPF8 625 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 HOXA11P31270 313 aaPredicted RBP15.99■□□□□ 0.15
GPC3-202ENST00000394299 SLC1A1P43005 524 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 BEX3Q00994 111 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 TRIP13Q15645 432 aaPredicted RBP15.99■□□□□ 0.15
GPC3-202ENST00000394299 CYP1B1Q16678 543 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 SGO2Q562F6 1265 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 ERICH1Q86X53 443 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 EIF1ADQ8N9N8 165 aaKnown RBP15.99■□□□□ 0.15
GPC3-202ENST00000394299 SLC4A11Q8NBS3 891 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 TMEM35BQ8NCS4 154 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 EIF2AQ9BY44 585 aaKnown RBP15.99■□□□□ 0.15
GPC3-202ENST00000394299 CENPHQ9H3R5 247 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 MTUS1Q9ULD2 1270 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 NFS1Q9Y697 457 aa15.99■□□□□ 0.15
GPC3-202ENST00000394299 SLC15A5A6NIM6 579 aa15.98■□□□□ 0.15
GPC3-202ENST00000394299 NPTXRO95502 500 aa15.98■□□□□ 0.15
GPC3-202ENST00000394299 SMIM10L2AP0DMW4 78 aa15.98■□□□□ 0.15
GPC3-202ENST00000394299 SMIM10L2BP0DMW5 78 aa15.98■□□□□ 0.15
GPC3-202ENST00000394299 HOXD8P13378 290 aaPredicted RBP15.98■□□□□ 0.15
GPC3-202ENST00000394299 ZNF157P51786 506 aaPredicted RBP15.98■□□□□ 0.15
GPC3-202ENST00000394299 PTPN20Q4JDL3 420 aa15.98■□□□□ 0.15
GPC3-202ENST00000394299 MORN1Q5T089 497 aa15.98■□□□□ 0.15
GPC3-202ENST00000394299 PRUNE1Q86TP1 453 aa15.98■□□□□ 0.15
GPC3-202ENST00000394299 FAM76AQ8TAV0 307 aa15.98■□□□□ 0.15
GPC3-202ENST00000394299 ACAP3Q96P50 834 aa15.98■□□□□ 0.15
GPC3-202ENST00000394299 FMO2Q99518 471 aa15.98■□□□□ 0.15
GPC3-202ENST00000394299 BCO2Q9BYV7 579 aa15.98■□□□□ 0.15
GPC3-202ENST00000394299 ADAMTS10Q9H324 1103 aa15.98■□□□□ 0.15
GPC3-202ENST00000394299 SNTG2Q9NY99 539 aa15.98■□□□□ 0.15
GPC3-202ENST00000394299 GNEQ9Y223 722 aaKnown RBP15.98■□□□□ 0.15
GPC3-202ENST00000394299 COL1A2P08123 1366 aa15.98■□□□□ 0.15
GPC3-202ENST00000394299 PIK3R2O00459 728 aa15.98■□□□□ 0.15
GPC3-202ENST00000394299 PPEF2O14830 753 aa15.98■□□□□ 0.15
GPC3-202ENST00000394299 KRT10P13645 584 aa15.98■□□□□ 0.15
GPC3-202ENST00000394299 HSPA6P17066 643 aa15.98■□□□□ 0.15
GPC3-202ENST00000394299 TMEM132DQ14C87 1099 aa15.98■□□□□ 0.15
GPC3-202ENST00000394299 PPP2R5EQ16537 467 aa15.98■□□□□ 0.15
GPC3-202ENST00000394299 HPDLQ96IR7 371 aa15.98■□□□□ 0.15
GPC3-202ENST00000394299 ZMAT2Q96NC0 199 aaKnown RBP15.98■□□□□ 0.15
GPC3-202ENST00000394299 PSD3Q9NYI0 1048 aa15.98■□□□□ 0.15
GPC3-202ENST00000394299 GOLGA8KD6RF30 607 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 ZNF865P0CJ78 1059 aaPredicted RBP15.97■□□□□ 0.15
GPC3-202ENST00000394299 MAP2K5Q13163 448 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 TAF1CQ15572 869 aaPredicted RBP15.97■□□□□ 0.15
GPC3-202ENST00000394299 CLUL1Q15846 466 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 GLRA4Q5JXX5 417 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 ZFYVE27Q5T4F4 411 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 DNAJC24Q6P3W2 148 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 DCUN1D2Q6PH85 259 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 RHOT1Q8IXI2 618 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 JOSD2Q8TAC2 188 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.97■□□□□ 0.15
GPC3-202ENST00000394299 UBA3Q8TBC4 463 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.97■□□□□ 0.15
GPC3-202ENST00000394299 KAT6AQ92794 2004 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 KIF12Q96FN5 646 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 RABEP2Q9H5N1 569 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 LRRC19Q9H756 370 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 DPP3Q9NY33 737 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 SCINQ9Y6U3 715 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 A6NJR5 290 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 GPR32O75388 356 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 RFC1P35251 1148 aaPredicted RBP15.97■□□□□ 0.15
GPC3-202ENST00000394299 ATP1A2P50993 1020 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 KAZNQ674X7 775 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 TLK2Q86UE8 772 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 TMEM40Q8WWA1 233 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 DNAJB3Q8WWF6 145 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 LRRC45Q96CN5 670 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 CPXM1Q96SM3 734 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 APOL6Q9BWW8 343 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 ASB7Q9H672 318 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.97■□□□□ 0.153e-8■■■■■ 41.7
GPC3-202ENST00000394299 PCDHGC3Q9UN70 934 aa15.97■□□□□ 0.15
GPC3-202ENST00000394299 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.97■□□□□ 0.15
GPC3-202ENST00000394299 EIF4BP23588 611 aaKnown RBP15.96■□□□□ 0.15
GPC3-202ENST00000394299 CATSPER4Q7RTX7 472 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms