RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 CLSTN1O94985 981 aa20.39■□□□□ 0.85
PDLIM7-204ENST00000393546 FGFR1OPO95684 399 aaKnown RBP20.39■□□□□ 0.85
PDLIM7-204ENST00000393546 C8AP07357 584 aa20.39■□□□□ 0.85
PDLIM7-204ENST00000393546 ATF2P15336 505 aa20.39■□□□□ 0.85
PDLIM7-204ENST00000393546 GCLMP48507 274 aa20.39■□□□□ 0.85
PDLIM7-204ENST00000393546 NLRP12P59046 1061 aa20.39■□□□□ 0.85
PDLIM7-204ENST00000393546 TNNC1P63316 161 aa20.39■□□□□ 0.85
PDLIM7-204ENST00000393546 GPR17Q13304 367 aa20.39■□□□□ 0.85
PDLIM7-204ENST00000393546 SGSM1Q2NKQ1 1148 aa20.39■□□□□ 0.85
PDLIM7-204ENST00000393546 WDR72Q3MJ13 1102 aa20.39■□□□□ 0.85
PDLIM7-204ENST00000393546 PPM1LQ5SGD2 360 aa20.39■□□□□ 0.85
PDLIM7-204ENST00000393546 C15orf39Q6ZRI6 1047 aa20.39■□□□□ 0.85
PDLIM7-204ENST00000393546 FRMD5Q7Z6J6 570 aa20.39■□□□□ 0.85
PDLIM7-204ENST00000393546 NECTIN4Q96NY8 510 aa20.39■□□□□ 0.85
PDLIM7-204ENST00000393546 MMS19Q96T76 1030 aa20.39■□□□□ 0.85
PDLIM7-204ENST00000393546 MMRN2Q9H8L6 949 aa20.39■□□□□ 0.85
PDLIM7-204ENST00000393546 DACH1Q9UI36 760 aa20.39■□□□□ 0.85
PDLIM7-204ENST00000393546 UNC80Q8N2C7 3258 aa20.39■□□□□ 0.85
PDLIM7-204ENST00000393546 DLL1O00548 723 aa20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 PRRG1O14668 218 aa20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 VNN1O95497 513 aa20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 HNRNPA1P09651 372 aaKnown RBP eCLIP20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 FAM163BP0C2L3 166 aa20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 LHX1P48742 406 aa20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 MYL7Q01449 175 aa20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 PPP3CAQ08209 521 aa20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 CBX2Q14781 532 aaPredicted RBP20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 SOWAHAQ2M3V2 549 aa20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 ZNF699Q32M78 642 aa20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 CCDC40Q4G0X9 1142 aa20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 TCERG1LQ5VWI1 586 aa20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 RNF19BQ6ZMZ0 732 aa20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 ADGRF2Q8IZF7 708 aa20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 SLC7A14Q8TBB6 771 aa20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 ADAMTS19Q8TE59 1207 aa20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 SRRTQ9BXP5 876 aaKnown RBP20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 PRKD2Q9BZL6 878 aa20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 XYLT2Q9H1B5 865 aa20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 VRTNQ9H8Y1 702 aa20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 PIDD1Q9HB75 910 aa20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 CYP4F11Q9HBI6 524 aa20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 TMEM8AQ9HCN3 771 aa20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 NXF1Q9UBU9 619 aaKnown RBP20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 PRKAG3Q9UGI9 489 aa20.38■□□□□ 0.85
PDLIM7-204ENST00000393546 GNA14O95837 355 aa20.37■□□□□ 0.85
PDLIM7-204ENST00000393546 WEE2P0C1S8 567 aa20.37■□□□□ 0.85
PDLIM7-204ENST00000393546 OR4Q2P0C623 313 aa20.37■□□□□ 0.85
PDLIM7-204ENST00000393546 HOXA9P31269 272 aa20.37■□□□□ 0.85
PDLIM7-204ENST00000393546 PIK3CAP42336 1068 aa20.37■□□□□ 0.85
PDLIM7-204ENST00000393546 ADCY1Q08828 1119 aa20.37■□□□□ 0.85
PDLIM7-204ENST00000393546 ZNF667Q5HYK9 610 aa20.37■□□□□ 0.85
PDLIM7-204ENST00000393546 KRT39Q6A163 491 aa20.37■□□□□ 0.85
PDLIM7-204ENST00000393546 LIMS2Q7Z4I7 341 aa20.37■□□□□ 0.85
PDLIM7-204ENST00000393546 TCEAL8Q8IYN2 117 aa20.37■□□□□ 0.85
PDLIM7-204ENST00000393546 DCP1BQ8IZD4 617 aaKnown RBP20.37■□□□□ 0.85
PDLIM7-204ENST00000393546 OR10T2Q8NGX3 314 aa20.37■□□□□ 0.85
PDLIM7-204ENST00000393546 SMG7Q92540 1137 aaKnown RBP20.37■□□□□ 0.85
PDLIM7-204ENST00000393546 TAF4BQ92750 862 aa20.37■□□□□ 0.85
PDLIM7-204ENST00000393546 TMEM209Q96SK2 561 aa20.37■□□□□ 0.85
PDLIM7-204ENST00000393546 RTP3Q9BQQ7 232 aa20.37■□□□□ 0.85
PDLIM7-204ENST00000393546 ACBD6Q9BR61 282 aa20.37■□□□□ 0.85
PDLIM7-204ENST00000393546 RHOBTB2Q9BYZ6 727 aa20.37■□□□□ 0.85
PDLIM7-204ENST00000393546 ZCWPW1Q9H0M4 648 aa20.37■□□□□ 0.85
PDLIM7-204ENST00000393546 DDX43Q9NXZ2 648 aaKnown RBP20.37■□□□□ 0.85
PDLIM7-204ENST00000393546 GABRDO14764 452 aa20.36■□□□□ 0.85
PDLIM7-204ENST00000393546 XYLBO75191 536 aa20.36■□□□□ 0.85
PDLIM7-204ENST00000393546 PAPLNO95428 1278 aa20.36■□□□□ 0.85
PDLIM7-204ENST00000393546 HLA-DRAP01903 254 aa20.36■□□□□ 0.85
PDLIM7-204ENST00000393546 P4HA1P13674 534 aa20.36■□□□□ 0.85
PDLIM7-204ENST00000393546 TSPY1Q01534 308 aa20.36■□□□□ 0.85
PDLIM7-204ENST00000393546 SMARCB1Q12824 385 aa20.36■□□□□ 0.85
PDLIM7-204ENST00000393546 DCAF17Q5H9S7 520 aaPredicted RBP20.36■□□□□ 0.85
PDLIM7-204ENST00000393546 CCDC183Q5T5S1 534 aa20.36■□□□□ 0.85
PDLIM7-204ENST00000393546 RBM43Q6ZSC3 357 aaKnown RBP20.36■□□□□ 0.85
PDLIM7-204ENST00000393546 UHRF1Q96T88 793 aaPredicted RBP20.36■□□□□ 0.85
PDLIM7-204ENST00000393546 PHF7Q9BWX1 381 aaPredicted RBP20.36■□□□□ 0.85
PDLIM7-204ENST00000393546 IMPG2Q9BZV3 1241 aa20.36■□□□□ 0.85
PDLIM7-204ENST00000393546 TACC1O75410 805 aa20.35■□□□□ 0.85
PDLIM7-204ENST00000393546 SEC24AO95486 1093 aa20.35■□□□□ 0.85
PDLIM7-204ENST00000393546 WARSP23381 471 aaKnown RBP20.35■□□□□ 0.85
PDLIM7-204ENST00000393546 PCSK1P29120 753 aa20.35■□□□□ 0.85
PDLIM7-204ENST00000393546 MXI1P50539 228 aa20.35■□□□□ 0.85
PDLIM7-204ENST00000393546 TPD52L1Q16890 204 aaPredicted RBP20.35■□□□□ 0.85
PDLIM7-204ENST00000393546 SLC39A12Q504Y0 691 aa20.35■□□□□ 0.85
PDLIM7-204ENST00000393546 CT47A1Q5JQC4 288 aaPredicted RBP20.35■□□□□ 0.85
PDLIM7-204ENST00000393546 SASS6Q6UVJ0 657 aa20.35■□□□□ 0.85
PDLIM7-204ENST00000393546 OSTM1Q86WC4 334 aa20.35■□□□□ 0.85
PDLIM7-204ENST00000393546 ADHFE1Q8IWW8 467 aa20.35■□□□□ 0.85
PDLIM7-204ENST00000393546 CCDC150Q8NCX0 1101 aa20.35■□□□□ 0.85
PDLIM7-204ENST00000393546 ZNF707Q96C28 371 aaPredicted RBP20.35■□□□□ 0.85
PDLIM7-204ENST00000393546 PGLYRP2Q96PD5 576 aa20.35■□□□□ 0.85
PDLIM7-204ENST00000393546 SNX25Q9H3E2 840 aa20.35■□□□□ 0.85
PDLIM7-204ENST00000393546 CDH22Q9UJ99 828 aa20.35■□□□□ 0.85
PDLIM7-204ENST00000393546 TSC2P49815 1807 aa20.34■□□□□ 0.85
PDLIM7-204ENST00000393546 CCL16O15467 120 aa20.34■□□□□ 0.85
PDLIM7-204ENST00000393546 ASS1P00966 412 aaKnown RBP20.34■□□□□ 0.85
PDLIM7-204ENST00000393546 LRG1P02750 347 aa20.34■□□□□ 0.85
PDLIM7-204ENST00000393546 PTMSP20962 102 aa20.34■□□□□ 0.85
PDLIM7-204ENST00000393546 ERCC5P28715 1186 aaPredicted RBP20.34■□□□□ 0.85
PDLIM7-204ENST00000393546 GNL1P36915 607 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms