RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 TOP3AQ13472 1001 aaPredicted RBP3.41□□□□□ -1.86
PHF3-202ENST00000393387 LPIN1Q14693 890 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 C2CD6Q53TS8 623 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 B3GNT6Q6ZMB0 384 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 LRRC70Q7Z2Q7 622 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 BBS7Q8IWZ6 715 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 RIBC1Q8N443 379 aaPredicted RBP3.41□□□□□ -1.86
PHF3-202ENST00000393387 LRRC17Q8N6Y2 441 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 BBS1Q8NFJ9 593 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 UTP15Q8TED0 518 aaKnown RBP3.41□□□□□ -1.86
PHF3-202ENST00000393387 RFT1Q96AA3 541 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 OTUB1Q96FW1 271 aaPredicted RBP3.41□□□□□ -1.86
PHF3-202ENST00000393387 ELMO2Q96JJ3 720 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 GFM1Q96RP9 751 aaKnown RBP3.41□□□□□ -1.86
PHF3-202ENST00000393387 NKIRAS2Q9NYR9 191 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 PHF11Q9UIL8 331 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 PRDM4Q9UKN5 801 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 L1RE1Q9UN81 338 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 ANGEL1Q9UNK9 670 aaKnown RBP3.41□□□□□ -1.86
PHF3-202ENST00000393387 HBS1LQ9Y450 684 aaKnown RBP3.41□□□□□ -1.86
PHF3-202ENST00000393387 ERBB3P21860 1342 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 RAB19A4D1S5 217 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 PI4KAP2A4QPH2 592 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 APOL1O14791 398 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 UPP2O95045 317 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 VNN2O95498 520 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 ZNF682O95780 498 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 CCDC166P0CW27 439 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 GARTP22102 1010 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 MXI1P50539 228 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 DHX34Q14147 1143 aaKnown RBP3.41□□□□□ -1.86
PHF3-202ENST00000393387 ZNF267Q14586 743 aaPredicted RBP3.41□□□□□ -1.86
PHF3-202ENST00000393387 CHI3L2Q15782 390 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 FAM189A2Q15884 450 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 NRF1Q16656 503 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 ZNF574Q6ZN55 896 aaPredicted RBP3.41□□□□□ -1.86
PHF3-202ENST00000393387 RBM43Q6ZSC3 357 aaKnown RBP3.41□□□□□ -1.86
PHF3-202ENST00000393387 KRT25Q7Z3Z0 450 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 PLEKHM2Q8IWE5 1019 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 RHOT2Q8IXI1 618 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 CENPLQ8N0S6 344 aaPredicted RBP3.41□□□□□ -1.86
PHF3-202ENST00000393387 PI4KAP1Q8N8J0 262 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 PI4K2BQ8TCG2 481 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 SH3TC2Q8TF17 1288 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 EZH1Q92800 747 aaPredicted RBP3.41□□□□□ -1.86
PHF3-202ENST00000393387 SEPHS2Q99611 448 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 DNAJC7Q99615 494 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 MND1Q9BWT6 205 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 METTL8Q9H825 291 aaKnown RBP3.41□□□□□ -1.86
PHF3-202ENST00000393387 CYP26B1Q9NR63 512 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 WDR35Q9P2L0 1181 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 MAN1B1Q9UKM7 699 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 FAM172BPA6NC97 362 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 PRKCBP05771 671 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 ATP5BP06576 529 aaKnown RBP3.41□□□□□ -1.86
PHF3-202ENST00000393387 GNAO1P09471 354 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 PLA2G4AP47712 749 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 SLC9A3P48764 834 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 NUMBP49757 651 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 S100A12P80511 92 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 ICA1Q05084 483 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 ALDH1L2Q3SY69 923 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 OTUD3Q5T2D3 398 aaPredicted RBP3.41□□□□□ -1.86
PHF3-202ENST00000393387 DNAJC24Q6P3W2 148 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 ADSSL1Q8N142 457 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 CCDC24Q8N4L8 307 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 GANCQ8TET4 914 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 CEP95Q96GE4 821 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 PRAM1Q96QH2 718 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 AIF1LQ9BQI0 150 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 FAM213AQ9BRX8 229 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 CDK19Q9BWU1 502 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 GOLPH3LQ9H4A5 285 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 SP140LQ9H930 580 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 ABCB9Q9NP78 766 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 VTI1BQ9UEU0 232 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 BCS1LQ9Y276 419 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 ZBTB1Q9Y2K1 713 aa3.41□□□□□ -1.86
PHF3-202ENST00000393387 EFCAB10A6NFE3 127 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 H0YJX3 145 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 INO80B-WBP1J3KQ70 363 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 LIN7AO14910 233 aaPredicted RBP3.4□□□□□ -1.86
PHF3-202ENST00000393387 EXTL3O43909 919 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 ZSCAN5DPP0CG00 497 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 MAGEA10P43363 369 aaPredicted RBP3.4□□□□□ -1.86
PHF3-202ENST00000393387 GALK2Q01415 458 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 CUL4AQ13619 759 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 TAB1Q15750 504 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 SWI5Q1ZZU3 235 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 FNBP1LQ5T0N5 605 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 ANKRD40Q6AI12 368 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 ARMC6Q6NXE6 501 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 EIF3MQ7L2H7 374 aaKnown RBP3.4□□□□□ -1.86
PHF3-202ENST00000393387 PODNQ7Z5L7 613 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 PLA2G4DQ86XP0 818 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 SCN4BQ8IWT1 228 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 EFCAB3Q8N7B9 438 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 C7orf31Q8N865 590 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 GCNAQ96QF7 691 aa3.4□□□□□ -1.86
PHF3-202ENST00000393387 TSEN34Q9BSV6 310 aaKnown RBP3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms