RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 IFIH1Q9BYX4 1025 aaKnown RBP3.82□□□□□ -1.8
XRN1-202ENST00000392981 MROH8Q9H579 483 aa3.82□□□□□ -1.8
XRN1-202ENST00000392981 CTNNA3Q9UI47 895 aa3.82□□□□□ -1.8
XRN1-202ENST00000392981 GMEB2Q9UKD1 530 aa3.82□□□□□ -1.8
XRN1-202ENST00000392981 GPRASP1Q5JY77 1395 aa3.82□□□□□ -1.8
XRN1-202ENST00000392981 ARVCFO00192 962 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 VPS4BO75351 444 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 ENDOD1O94919 500 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 CKMP06732 381 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 SERPINF1P36955 418 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 IFI44LQ53G44 452 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 PITRM1Q5JRX3 1037 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 PRAMEF14Q5SWL7 426 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 TEX35Q5T0J7 233 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 MCTP2Q6DN12 878 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 SLFN12LQ6IEE8 588 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 KRT27Q7Z3Y8 459 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 UHMK1Q8TAS1 419 aaKnown RBP3.81□□□□□ -1.8
XRN1-202ENST00000392981 GRK7Q8WTQ7 553 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 FAM120BQ96EK7 910 aaKnown RBP3.81□□□□□ -1.8
XRN1-202ENST00000392981 GAD1Q99259 594 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 SYT5O00445 386 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 CTDSP2O14595 271 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 WDR46O15213 610 aaKnown RBP3.81□□□□□ -1.8
XRN1-202ENST00000392981 MAFO75444 373 aaPredicted RBP3.81□□□□□ -1.8
XRN1-202ENST00000392981 HRGP04196 525 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 TIMP2P16035 220 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 AOAHP28039 575 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 BAG6P46379 1132 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 CRYMQ14894 314 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 MUM1Q2TAK8 710 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 KCTD21Q4G0X4 260 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 RUNDC3AQ59EK9 446 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 FAM111BQ6SJ93 734 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 PRR23CQ6ZRP0 262 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 RRM2BQ7LG56 351 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 ADCK2Q7Z695 626 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 PDZD3Q86UT5 571 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 NME9Q86XW9 330 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 RASGRP3Q8IV61 690 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 P3H2Q8IVL5 708 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 ZNF687Q8N1G0 1237 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 KCNN1Q92952 543 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 SUCLG2Q96I99 432 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 PHACTR3Q96KR7 559 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 CARD6Q9BX69 1037 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 KRT82Q9NSB4 513 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 BAIAP2L1Q9UHR4 511 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 SOX13Q9UN79 622 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 ACTL7AQ9Y615 435 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 C22orf46C9J442 243 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 H0Y626 953 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 BTN3A1O00481 513 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 SIN3BO75182 1162 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 CCNDBP1O95273 360 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 LY86O95711 162 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 CAP2P40123 477 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 SKIV2L2P42285 1042 aaKnown RBP3.81□□□□□ -1.8
XRN1-202ENST00000392981 LIG4P49917 911 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 SMAD3P84022 425 aaKnown RBP3.81□□□□□ -1.8
XRN1-202ENST00000392981 SCARB2Q14108 478 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 DCAF17Q5H9S7 520 aaPredicted RBP3.81□□□□□ -1.8
XRN1-202ENST00000392981 TJAP1Q5JTD0 557 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 KAZNQ674X7 775 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 OLFML2BQ68BL8 750 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 CYFIP1Q7L576 1253 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 SESTD1Q86VW0 696 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 VWA5B2Q8N398 1253 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 MEIOBQ8N635 442 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 PLBD2Q8NHP8 589 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 SPATA18Q8TC71 538 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 KIAA1524Q8TCG1 905 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 GAB3Q8WWW8 586 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 TCTN2Q96GX1 697 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 SEMA4AQ9H3S1 761 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 AP5S1Q9NUS5 200 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 FAM184BQ9ULE4 1060 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 SLC6A14Q9UN76 642 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 ATP8B3O60423 1300 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 URADA6NGE7 173 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 WTIPA6NIX2 430 aaPredicted RBP3.81□□□□□ -1.8
XRN1-202ENST00000392981 SYN3O14994 580 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 SPINT1O43278 529 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 CCNT2O60583 730 aaKnown RBP3.81□□□□□ -1.8
XRN1-202ENST00000392981 MT-ND5P03915 603 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 BMP1P13497 986 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 HOXD13P35453 343 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 PIP4K2AP48426 406 aaPredicted RBP3.81□□□□□ -1.8
XRN1-202ENST00000392981 RPIAP49247 311 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 EPHB3P54753 998 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 IL1RL1Q01638 556 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 SCN1BQ07699 218 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 FRG1Q14331 258 aaKnown RBP3.81□□□□□ -1.8
XRN1-202ENST00000392981 KYNUQ16719 465 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 TCERG1LQ5VWI1 586 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 NEK10Q6ZWH5 1172 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 RHPN2Q8IUC4 686 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 TEX9Q8N6V9 391 aa3.81□□□□□ -1.8
XRN1-202ENST00000392981 SYTL5Q8TDW5 730 aaPredicted RBP3.81□□□□□ -1.8
XRN1-202ENST00000392981 DEPDC1BQ8WUY9 529 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms