RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 LIMS2Q7Z4I7 341 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 ADGRD2Q7Z7M1 963 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 RBM23Q86U06 439 aaKnown RBP7.26□□□□□ -1.25
UBBP1-201ENST00000392399 TTC39CQ8N584 583 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 FBXL13Q8NEE6 735 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 ZNF461Q8TAF7 563 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 SLC22A17Q8WUG5 538 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 AUTS2Q8WXX7 1259 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 HLA-CQ95604 372 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 SLC35C1Q96A29 364 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 MED15Q96RN5 788 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 BPIFA3Q9BQP9 254 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 CLSTN3Q9BQT9 956 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 ACBD6Q9BR61 282 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 DNAI2Q9GZS0 605 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 XYLT2Q9H1B5 865 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 IGFLR1Q9H665 355 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 RAB20Q9NX57 234 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 MAGEC2Q9UBF1 373 aaPredicted RBP7.26□□□□□ -1.25
UBBP1-201ENST00000392399 FBXL5Q9UKA1 691 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 SNX9Q9Y5X1 595 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 HCFC2Q9Y5Z7 792 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 A0A0C4DFX4 3053 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 ANK1P16157 1881 aa7.26□□□□□ -1.25
UBBP1-201ENST00000392399 SMTNL1A8MU46 457 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 GABRDO14764 452 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 ABLIM3O94929 683 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 VNN1O95497 513 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 HLA-DRAP01903 254 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 AFPP02771 609 aaKnown RBP7.25□□□□□ -1.25
UBBP1-201ENST00000392399 TRIM49P0CI25 452 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 TRIM49CP0CI26 452 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 ATF2P15336 505 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 EEF1GP26641 437 aaKnown RBP7.25□□□□□ -1.25
UBBP1-201ENST00000392399 PCSK1P29120 753 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 ELF1P32519 619 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 OR1D2P34982 312 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 PIK3CAP42336 1068 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 FMO5P49326 533 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 MYL6P60660 151 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 MYL5Q02045 173 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 KCNH2Q12809 1159 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 GPR17Q13304 367 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 SOWAHAQ2M3V2 549 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 ZNF699Q32M78 642 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 PUS10Q3MIT2 529 aaKnown RBP7.25□□□□□ -1.25
UBBP1-201ENST00000392399 ZNF667Q5HYK9 610 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 WDR44Q5JSH3 913 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 WSCD1Q658N2 575 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 PRSS55Q6UWB4 352 aaPredicted RBP7.25□□□□□ -1.25
UBBP1-201ENST00000392399 IRF2BP1Q8IU81 584 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 DCP1BQ8IZD4 617 aaKnown RBP7.25□□□□□ -1.25
UBBP1-201ENST00000392399 PDCL2Q8N4E4 241 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 ANKRD20A12PQ8NF67 263 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 TAS1R2Q8TE23 839 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 C2orf15Q8WU43 125 aaKnown RBP7.25□□□□□ -1.25
UBBP1-201ENST00000392399 PPM1EQ8WY54 764 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 B3GALT6Q96L58 329 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 CNOT6LQ96LI5 555 aaKnown RBP7.25□□□□□ -1.25
UBBP1-201ENST00000392399 MMS19Q96T76 1030 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 RHOBTB2Q9BYZ6 727 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 UBE2ZQ9H832 354 aaPredicted RBP7.25□□□□□ -1.25
UBBP1-201ENST00000392399 CYP3A43Q9HB55 503 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 DZANK1Q9NVP4 752 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 CLDND1Q9NY35 253 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 HSFX1Q9UBD0 423 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 AFF4Q9UHB7 1163 aaKnown RBP7.25□□□□□ -1.25
UBBP1-201ENST00000392399 L1RE1Q9UN81 338 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 NFE2L3Q9Y4A8 694 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 PCDHGC5Q9Y5F6 944 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 TIMM13Q9Y5L4 95 aaPredicted RBP7.25□□□□□ -1.25
UBBP1-201ENST00000392399 CDY1Q9Y6F8 540 aa7.25□□□□□ -1.25
UBBP1-201ENST00000392399 SCN1AP35498 2009 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 SPTBN5Q9NRC6 3674 aaKnown RBP7.24□□□□□ -1.25
UBBP1-201ENST00000392399 SYCE3A1L190 88 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 GTPBP10A4D1E9 387 aaKnown RBP7.24□□□□□ -1.25
UBBP1-201ENST00000392399 LRRC10BA6NIK2 292 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 TGM5O43548 720 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 CSPG5O95196 566 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 PAPLNO95428 1278 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 TPM2P07951 284 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 CPB1P15086 417 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 RPL17P18621 184 aaKnown RBP7.24□□□□□ -1.25
UBBP1-201ENST00000392399 TRIM21P19474 475 aaKnown RBP7.24□□□□□ -1.25
UBBP1-201ENST00000392399 WARSP23381 471 aaKnown RBP7.24□□□□□ -1.25
UBBP1-201ENST00000392399 HOXA9P31269 272 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 GTF2F1P35269 517 aaKnown RBP eCLIP7.24□□□□□ -1.25
UBBP1-201ENST00000392399 GNL1P36915 607 aaPredicted RBP7.24□□□□□ -1.25
UBBP1-201ENST00000392399 LTBRP36941 435 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 MTIF2P46199 727 aaKnown RBP7.24□□□□□ -1.25
UBBP1-201ENST00000392399 ZNF165P49910 485 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 TSPY1Q01534 308 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 ROR1Q01973 937 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 ITIH3Q06033 890 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 MAPRE1Q15691 268 aaKnown RBP7.24□□□□□ -1.25
UBBP1-201ENST00000392399 NFE2Q16621 373 aaPredicted RBP7.24□□□□□ -1.25
UBBP1-201ENST00000392399 MAN2A1Q16706 1144 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 ZSCAN23Q3MJ62 389 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 ANO6Q4KMQ2 910 aa7.24□□□□□ -1.25
UBBP1-201ENST00000392399 CBWD6Q4V339 395 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms