RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 PABPC1LQ4VXU2 614 aaKnown RBP13.63□□□□□ -0.23
GGPS1-203ENST00000391855 COBLL1Q53SF7 1204 aa13.63□□□□□ -0.23
GGPS1-203ENST00000391855 WSCD1Q658N2 575 aa13.63□□□□□ -0.23
GGPS1-203ENST00000391855 LMBRD2Q68DH5 695 aaPredicted RBP13.63□□□□□ -0.23
GGPS1-203ENST00000391855 IQCEQ6IPM2 695 aa13.63□□□□□ -0.23
GGPS1-203ENST00000391855 RNF19BQ6ZMZ0 732 aa13.63□□□□□ -0.23
GGPS1-203ENST00000391855 TRAPPC11Q7Z392 1133 aa13.63□□□□□ -0.23
GGPS1-203ENST00000391855 DCP1BQ8IZD4 617 aaKnown RBP13.63□□□□□ -0.23
GGPS1-203ENST00000391855 OR5B17Q8NGF7 314 aa13.63□□□□□ -0.23
GGPS1-203ENST00000391855 FEZF2Q8TBJ5 459 aa13.63□□□□□ -0.23
GGPS1-203ENST00000391855 SMARCE1Q969G3 411 aa13.63□□□□□ -0.23
GGPS1-203ENST00000391855 ZCWPW1Q9H0M4 648 aa13.63□□□□□ -0.23
GGPS1-203ENST00000391855 FRMD4BQ9Y2L6 1034 aa13.63□□□□□ -0.23
GGPS1-203ENST00000391855 YIPF1Q9Y548 306 aa13.63□□□□□ -0.23
GGPS1-203ENST00000391855 MTMR11A4FU01 709 aa13.62□□□□□ -0.23
GGPS1-203ENST00000391855 ZNF197O14709 1029 aa13.62□□□□□ -0.23
GGPS1-203ENST00000391855 SEC24AO95486 1093 aa13.62□□□□□ -0.23
GGPS1-203ENST00000391855 PTPN2P17706 415 aa13.62□□□□□ -0.23
GGPS1-203ENST00000391855 NR2F2P24468 414 aa13.62□□□□□ -0.23
GGPS1-203ENST00000391855 PPP1R2P41236 205 aa13.62□□□□□ -0.23
GGPS1-203ENST00000391855 LHX1P48742 406 aa13.62□□□□□ -0.23
GGPS1-203ENST00000391855 NFE2Q16621 373 aaPredicted RBP13.62□□□□□ -0.23
GGPS1-203ENST00000391855 EDRF1Q3B7T1 1238 aa13.62□□□□□ -0.23
GGPS1-203ENST00000391855 ZNF658Q5TYW1 1059 aaPredicted RBP13.62□□□□□ -0.23
GGPS1-203ENST00000391855 CENPPQ6IPU0 288 aa13.62□□□□□ -0.23
GGPS1-203ENST00000391855 PDCL2Q8N4E4 241 aa13.62□□□□□ -0.23
GGPS1-203ENST00000391855 OR10T2Q8NGX3 314 aa13.62□□□□□ -0.23
GGPS1-203ENST00000391855 SPATA20Q8TB22 786 aa13.62□□□□□ -0.23
GGPS1-203ENST00000391855 SPPL2BQ8TCT7 592 aa13.62□□□□□ -0.23
GGPS1-203ENST00000391855 TMC2Q8TDI7 906 aa13.62□□□□□ -0.23
GGPS1-203ENST00000391855 PARD3BQ8TEW8 1205 aa13.62□□□□□ -0.23
GGPS1-203ENST00000391855 HPDLQ96IR7 371 aa13.62□□□□□ -0.23
GGPS1-203ENST00000391855 CDH7Q9ULB5 785 aa13.62□□□□□ -0.23
GGPS1-203ENST00000391855 L1RE1Q9UN81 338 aa13.62□□□□□ -0.23
GGPS1-203ENST00000391855 SNX9Q9Y5X1 595 aa13.62□□□□□ -0.23
GGPS1-203ENST00000391855 BDP1A6H8Y1 2624 aa13.61□□□□□ -0.23
GGPS1-203ENST00000391855 MICAL2O94851 1124 aa13.61□□□□□ -0.23
GGPS1-203ENST00000391855 FAM163BP0C2L3 166 aa13.61□□□□□ -0.23
GGPS1-203ENST00000391855 OR4Q2P0C623 313 aa13.61□□□□□ -0.23
GGPS1-203ENST00000391855 LAMP2P13473 410 aa13.61□□□□□ -0.23
GGPS1-203ENST00000391855 PCSK1P29120 753 aa13.61□□□□□ -0.23
GGPS1-203ENST00000391855 ATICP31939 592 aa13.61□□□□□ -0.23
GGPS1-203ENST00000391855 ALDH1A3P47895 512 aa13.61□□□□□ -0.23
GGPS1-203ENST00000391855 TUFMP49411 452 aaKnown RBP13.61□□□□□ -0.23
GGPS1-203ENST00000391855 CLDN10P78369 228 aa13.61□□□□□ -0.23
GGPS1-203ENST00000391855 SIGLEC14Q08ET2 396 aa13.61□□□□□ -0.23
GGPS1-203ENST00000391855 TWF1Q12792 350 aa13.61□□□□□ -0.23
GGPS1-203ENST00000391855 TRPC3Q13507 836 aa13.61□□□□□ -0.23
GGPS1-203ENST00000391855 TRIM67Q6ZTA4 783 aa13.61□□□□□ -0.23
GGPS1-203ENST00000391855 INTS8Q75QN2 995 aaKnown RBP13.61□□□□□ -0.23
GGPS1-203ENST00000391855 ADGRF2Q8IZF7 708 aa13.61□□□□□ -0.23
GGPS1-203ENST00000391855 SYAP1Q96A49 352 aaPredicted RBP13.61□□□□□ -0.23
GGPS1-203ENST00000391855 ZNF512Q96ME7 567 aaPredicted RBP13.61□□□□□ -0.23
GGPS1-203ENST00000391855 MYADMQ96S97 322 aa13.61□□□□□ -0.23
GGPS1-203ENST00000391855 ACBD6Q9BR61 282 aa13.61□□□□□ -0.23
GGPS1-203ENST00000391855 DNMT3BQ9UBC3 853 aaKnown RBP13.61□□□□□ -0.23
GGPS1-203ENST00000391855 LIMD1Q9UGP4 676 aa13.61□□□□□ -0.23
GGPS1-203ENST00000391855 MRPS23Q9Y3D9 190 aaKnown RBP13.61□□□□□ -0.23
GGPS1-203ENST00000391855 ASB3Q9Y575 518 aa13.61□□□□□ -0.23
GGPS1-203ENST00000391855 N4BP1O75113 896 aaKnown RBP13.6□□□□□ -0.23
GGPS1-203ENST00000391855 PHACTR2O75167 634 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 RHOP08100 348 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 EPHB3P54753 998 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 UBE2HP62256 183 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 DUSP4Q13115 394 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 TDGQ13569 410 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 SLC39A12Q504Y0 691 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 ZCWPW2Q504Y3 356 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 CYP4A22Q5TCH4 519 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 CEP135Q66GS9 1140 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 MTSS1LQ765P7 747 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 PDZD4Q76G19 769 aaPredicted RBP13.6□□□□□ -0.23
GGPS1-203ENST00000391855 BMP8AQ7Z5Y6 402 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 ITIH5Q86UX2 942 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 PGLYRP2Q96PD5 576 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 TSG101Q99816 390 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 RTP3Q9BQQ7 232 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 LRFN3Q9BTN0 628 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 MKNK1Q9BUB5 465 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 GZF1Q9H116 711 aaPredicted RBP13.6□□□□□ -0.23
GGPS1-203ENST00000391855 VRTNQ9H8Y1 702 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 C11orf16Q9NQ32 467 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 ASAH2Q9NR71 780 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 DDX43Q9NXZ2 648 aaKnown RBP13.6□□□□□ -0.23
GGPS1-203ENST00000391855 GDE1Q9NZC3 331 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 MAPK8IP1Q9UQF2 711 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 PCDHA5Q9Y5H7 936 aa13.6□□□□□ -0.23
GGPS1-203ENST00000391855 LRRIQ3A6PVS8 624 aaPredicted RBP13.59□□□□□ -0.23
GGPS1-203ENST00000391855 GABRDO14764 452 aa13.59□□□□□ -0.23
GGPS1-203ENST00000391855 IKBKBO14920 756 aa13.59□□□□□ -0.23
GGPS1-203ENST00000391855 VNN2O95498 520 aa13.59□□□□□ -0.23
GGPS1-203ENST00000391855 FGF19O95750 216 aa13.59□□□□□ -0.23
GGPS1-203ENST00000391855 KRT13P13646 458 aa13.59□□□□□ -0.23
GGPS1-203ENST00000391855 PSMC2P35998 433 aaKnown RBP13.59□□□□□ -0.23
GGPS1-203ENST00000391855 EPHA5P54756 1037 aa13.59□□□□□ -0.23
GGPS1-203ENST00000391855 TNNC1P63316 161 aa13.59□□□□□ -0.23
GGPS1-203ENST00000391855 NTHL1P78549 312 aa13.59□□□□□ -0.23
GGPS1-203ENST00000391855 BIRC3Q13489 604 aa13.59□□□□□ -0.23
GGPS1-203ENST00000391855 STIM1Q13586 685 aa13.59□□□□□ -0.23
GGPS1-203ENST00000391855 VEPH1Q14D04 833 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms