RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 KIRREL3Q8IZU9 778 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 SLC7A5P1Q8MH63 180 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 ZNF444Q8N0Y2 327 aaPredicted RBP2.81□□□□□ -1.96
TRAV41-201ENST00000390468 FBXL16Q8N461 479 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 CERS5Q8N5B7 392 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 TMCO5AQ8N6Q1 288 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 NECAB1Q8N987 351 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 CCDC63Q8NA47 563 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 SLC43A3Q8NBI5 491 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 STKLD1Q8NE28 680 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 DEPTORQ8TB45 409 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 DQX1Q8TE96 717 aaKnown RBP2.81□□□□□ -1.96
TRAV41-201ENST00000390468 DIS3LQ8TF46 1054 aaKnown RBP2.81□□□□□ -1.96
TRAV41-201ENST00000390468 ZNF473Q8WTR7 871 aaKnown RBP2.81□□□□□ -1.96
TRAV41-201ENST00000390468 CCDC12Q8WUD4 166 aaPredicted RBP2.81□□□□□ -1.96
TRAV41-201ENST00000390468 ATRIPQ8WXE1 791 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 JDP2Q8WYK2 163 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 KCNN1Q92952 543 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 CCDC74AQ96AQ1 378 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 CENPTQ96BT3 561 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 RRP36Q96EU6 259 aaKnown RBP2.81□□□□□ -1.96
TRAV41-201ENST00000390468 STAMBPL1Q96FJ0 436 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 ZNF274Q96GC6 653 aaPredicted RBP2.81□□□□□ -1.96
TRAV41-201ENST00000390468 CRELD1Q96HD1 420 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 SNX27Q96L92 541 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 NAP1L4Q99733 375 aaKnown RBP2.81□□□□□ -1.96
TRAV41-201ENST00000390468 SENP7Q9BQF6 1050 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 SIKE1Q9BRV8 207 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 MXD3Q9BW11 206 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 AGXT2Q9BYV1 514 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 NUF2Q9BZD4 464 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 SLC7A5P2Q9GIP4 190 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 NDEL1Q9GZM8 345 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 SCAND2PQ9GZW5 306 aaPredicted RBP2.81□□□□□ -1.96
TRAV41-201ENST00000390468 NSRP1Q9H0G5 558 aaKnown RBP2.81□□□□□ -1.96
TRAV41-201ENST00000390468 EPN3Q9H201 632 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 VPS33BQ9H267 617 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 MKNK2Q9HBH9 465 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 PARVGQ9HBI0 331 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 ATP13A1Q9HD20 1204 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 ZNF277Q9NRM2 450 aaPredicted RBP2.81□□□□□ -1.96
TRAV41-201ENST00000390468 SEPT11Q9NVA2 429 aaKnown RBP2.81□□□□□ -1.96
TRAV41-201ENST00000390468 USP40Q9NVE5 1235 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 HAUS2Q9NVX0 235 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 FKBP14Q9NWM8 211 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 EURLQ9NYK6 297 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 IL20Q9NYY1 176 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 RTEL1Q9NZ71 1219 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 IL1RAPL1Q9NZN1 696 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 NDUFA13Q9P0J0 144 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 SAP30BPQ9UHR5 308 aaKnown RBP2.81□□□□□ -1.96
TRAV41-201ENST00000390468 NRBP1Q9UHY1 535 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 ATPIF1Q9UII2 106 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 GTF3C4Q9UKN8 822 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 MAFFQ9ULX9 164 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 DIS3Q9Y2L1 958 aaKnown RBP2.81□□□□□ -1.96
TRAV41-201ENST00000390468 ZDHHC9Q9Y397 364 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 SAMM50Q9Y512 469 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 ASB3Q9Y575 518 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 SLC12A7Q9Y666 1083 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 COMMD3-BMI1R4GMX3 469 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 TNKSO95271 1327 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 MYPNQ86TC9 1320 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 COL2A1P02458 1487 aaPredicted RBP2.81□□□□□ -1.96
TRAV41-201ENST00000390468 A0A0G2JMZ2 1700 aa2.81□□□□□ -1.96
TRAV41-201ENST00000390468 MYH10P35580 1976 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 TRIP12Q14669 1992 aaPredicted RBP2.8□□□□□ -1.96
TRAV41-201ENST00000390468 TRIP11Q15643 1979 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 LRRC37A2A6NM11 1700 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 NID2Q14112 1375 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 PLIN4Q96Q06 1357 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 LTBP3Q9NS15 1303 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.8□□□□□ -1.96
TRAV41-201ENST00000390468 IQANK1A0A1B0GTG1 560 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 LINC00854A0A1B0GVQ3 168 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 PTPDC1A2A3K4 754 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 CTAGE9A4FU28 777 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 CFAP69A5D8W1 941 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 TCAF2A6NFQ2 919 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 E9PMD0 336 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 H3BS24 57 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 MATN2O00339 956 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 GIPC1O14908 333 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 TEX28O15482 410 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 SGTAO43765 313 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 ORC4O43929 436 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 NUAK1O60285 661 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 TSPAN1O60635 241 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 SNX2O60749 519 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 CUTAO60888 179 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 CBFA2T3O75081 653 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 N4BP1O75113 896 aaKnown RBP2.8□□□□□ -1.96
TRAV41-201ENST00000390468 CLASP2O75122 1294 aaKnown RBP2.8□□□□□ -1.96
TRAV41-201ENST00000390468 RAD17O75943 681 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 DDAH1O94760 285 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 GFPT2O94808 682 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 PRPF6O94906 941 aaKnown RBP2.8□□□□□ -1.96
TRAV41-201ENST00000390468 LCA5LO95447 670 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 FAM107AO95990 144 aa2.8□□□□□ -1.96
TRAV41-201ENST00000390468 F13A1P00488 732 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms