RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 KCNH7Q9NS40 1196 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 ARHGAP10A1A4S6 786 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 PIK3CDO00329 1044 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 NEMP1O14524 444 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 SLC34A1Q06495 639 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 TFDP1Q14186 410 aa13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 TSPYL2Q9H2G4 693 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC9-201ENST00000389328 TCRBV7S2A1N4TA0A589 114 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 M0QYV0 167 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 PROSCO94903 275 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 FGRP09769 529 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 NCOA4Q13772 614 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 RARS2Q5T160 578 aaKnown RBP13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 CCNYL1Q8N7R7 359 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 TMEM143Q96AN5 459 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 NMD3Q96D46 503 aaKnown RBP13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 BTBD10Q9BSF8 475 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 AIM2O14862 343 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 GJB6O95452 261 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 GTF2H1P32780 548 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 PPP3CAQ08209 521 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 ARSHQ5FYA8 562 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 MOXD1Q6UVY6 613 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 LRRC74BQ6ZQY2 392 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 ART4Q93070 314 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 RMDN2Q96LZ7 410 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 PFDN4Q9NQP4 134 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 ZHX2Q9Y6X8 837 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 SLITRK3O94933 977 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 SV2AQ7L0J3 742 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 PALB2Q86YC2 1186 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 MAGEC3Q8TD91 643 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 ANKRD27Q96NW4 1050 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 PCDHA10Q9Y5I2 948 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 IGSF9BQ9UPX0 1349 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 SLURP2P0DP57 97 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 AQP5P55064 265 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 PRR5LQ6MZQ0 368 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 ISLR2Q6UXK2 745 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 EPS8L1Q8TE68 723 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 SNRNP27Q8WVK2 155 aaKnown RBP13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 TLCD1Q96CP7 247 aa13.78□□□□□ -0.2
TRAPPC9-201ENST00000389328 FCHO1O14526 889 aa13.77□□□□□ -0.2
TRAPPC9-201ENST00000389328 PSTPIP1O43586 416 aa13.77□□□□□ -0.2
TRAPPC9-201ENST00000389328 PYGBP11216 843 aa13.77□□□□□ -0.2
TRAPPC9-201ENST00000389328 RIPK1Q13546 671 aa13.77□□□□□ -0.2
TRAPPC9-201ENST00000389328 SEZ6Q53EL9 994 aa13.77□□□□□ -0.2
TRAPPC9-201ENST00000389328 JADE1Q6IE81 842 aa13.77□□□□□ -0.2
TRAPPC9-201ENST00000389328 LRRC6Q86X45 466 aa13.77□□□□□ -0.2
TRAPPC9-201ENST00000389328 HDAC11Q96DB2 347 aa13.77□□□□□ -0.2
TRAPPC9-201ENST00000389328 CORO1CQ9ULV4 474 aaPredicted RBP13.77□□□□□ -0.2
TRAPPC9-201ENST00000389328 TBX20Q9UMR3 447 aa13.77□□□□□ -0.2
TRAPPC9-201ENST00000389328 DDX3YO15523 660 aaKnown RBP13.77□□□□□ -0.21
TRAPPC9-201ENST00000389328 BRD2P25440 801 aaKnown RBP13.77□□□□□ -0.21
TRAPPC9-201ENST00000389328 SFNP31947 248 aa13.77□□□□□ -0.21
TRAPPC9-201ENST00000389328 GPAT2Q6NUI2 795 aa13.77□□□□□ -0.21
TRAPPC9-201ENST00000389328 DTNBP1Q96EV8 351 aa13.77□□□□□ -0.21
TRAPPC9-201ENST00000389328 FBXO28Q9NVF7 368 aa13.77□□□□□ -0.21
TRAPPC9-201ENST00000389328 DNPEPQ9ULA0 475 aa13.77□□□□□ -0.21
TRAPPC9-201ENST00000389328 AGAP1Q9UPQ3 857 aa13.77□□□□□ -0.21
TRAPPC9-201ENST00000389328 GRAP2O75791 330 aa13.77□□□□□ -0.21
TRAPPC9-201ENST00000389328 KRT36O76013 467 aa13.77□□□□□ -0.21
TRAPPC9-201ENST00000389328 ENO3P13929 434 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC9-201ENST00000389328 VCAM1P19320 739 aa13.77□□□□□ -0.21
TRAPPC9-201ENST00000389328 TCN1P20061 433 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC9-201ENST00000389328 OTUD4Q01804 1114 aaKnown RBP13.77□□□□□ -0.21
TRAPPC9-201ENST00000389328 PIGHQ14442 188 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC9-201ENST00000389328 RNF43Q68DV7 783 aa13.77□□□□□ -0.21
TRAPPC9-201ENST00000389328 CDHR1Q96JP9 859 aa13.77□□□□□ -0.21
TRAPPC9-201ENST00000389328 DDX50Q9BQ39 737 aaKnown RBP13.77□□□□□ -0.21
TRAPPC9-201ENST00000389328 MXRA8Q9BRK3 442 aa13.77□□□□□ -0.21
TRAPPC9-201ENST00000389328 RPF1Q9H9Y2 349 aaKnown RBP13.77□□□□□ -0.21
TRAPPC9-201ENST00000389328 NID2Q14112 1375 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 CLEC16AQ2KHT3 1053 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 PODNQ7Z5L7 613 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 MCOLN2Q8IZK6 566 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 C10orf88Q9H8K7 445 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 ABCC6O95255 1503 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 STX1BP61266 288 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 BNIP1Q12981 228 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 MORF4L2Q15014 288 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 WDR72Q3MJ13 1102 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 Q4G0T1 1027 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 TMEM259Q4ZIN3 620 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 FAM160B1Q5W0V3 765 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 IRGCQ6NXR0 463 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 PDZD4Q76G19 769 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 SPOCK2Q92563 424 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 DHX35Q9H5Z1 703 aaKnown RBP13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 FEM1BQ9UK73 627 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 NCANO14594 1321 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 TMEM150BA6NC51 233 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 DGKIO75912 1065 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 ASNSP08243 561 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 ETS1P14921 441 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 CASP2P42575 452 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 PTK6Q13882 451 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 HEATR6Q6AI08 1181 aaKnown RBP13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 ACAD11Q709F0 780 aa13.76□□□□□ -0.21
TRAPPC9-201ENST00000389328 NLGN1Q8N2Q7 840 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms