RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 LSP1P33241 339 aa16.2■□□□□ 0.18
ALK-201ENST00000389048 GSSP48637 474 aa16.2■□□□□ 0.18
ALK-201ENST00000389048 RCN1Q15293 331 aa16.2■□□□□ 0.18
ALK-201ENST00000389048 DAB2IPQ5VWQ8 1189 aa16.2■□□□□ 0.18
ALK-201ENST00000389048 MAP3K20Q9NYL2 800 aaKnown RBP16.2■□□□□ 0.18
ALK-201ENST00000389048 CPDO75976 1380 aa16.2■□□□□ 0.18
ALK-201ENST00000389048 NCOA4Q13772 614 aa16.2■□□□□ 0.18
ALK-201ENST00000389048 CAPN1P07384 714 aa16.19■□□□□ 0.18
ALK-201ENST00000389048 TXNP10599 105 aaKnown RBP16.19■□□□□ 0.18
ALK-201ENST00000389048 MAPK10P53779 464 aa16.19■□□□□ 0.18
ALK-201ENST00000389048 ST8SIA6P61647 398 aa16.19■□□□□ 0.18
ALK-201ENST00000389048 BYSLQ13895 437 aaKnown RBP16.19■□□□□ 0.18
ALK-201ENST00000389048 ZNF512Q96ME7 567 aaPredicted RBP16.19■□□□□ 0.18
ALK-201ENST00000389048 ECSITQ9BQ95 431 aa16.19■□□□□ 0.18
ALK-201ENST00000389048 JPH1Q9HDC5 661 aaPredicted RBP16.19■□□□□ 0.18
ALK-201ENST00000389048 DDX5P17844 614 aaKnown RBP16.19■□□□□ 0.18
ALK-201ENST00000389048 CDH2P19022 906 aaPredicted RBP16.19■□□□□ 0.18
ALK-201ENST00000389048 SFNP31947 248 aa16.19■□□□□ 0.18
ALK-201ENST00000389048 CHI3L1P36222 383 aaPredicted RBP16.19■□□□□ 0.18
ALK-201ENST00000389048 FRMD5Q7Z6J6 570 aa16.19■□□□□ 0.18
ALK-201ENST00000389048 GPR63Q9BZJ6 419 aa16.19■□□□□ 0.18
ALK-201ENST00000389048 CD209Q9NNX6 404 aa16.19■□□□□ 0.18
ALK-201ENST00000389048 MAGI2Q86UL8 1455 aa16.19■□□□□ 0.18
ALK-201ENST00000389048 PRRG1O14668 218 aa16.19■□□□□ 0.18
ALK-201ENST00000389048 RXRBP28702 533 aa16.19■□□□□ 0.18
ALK-201ENST00000389048 TMEM132DQ14C87 1099 aa16.19■□□□□ 0.18
ALK-201ENST00000389048 AKIRIN2Q53H80 203 aa16.19■□□□□ 0.18
ALK-201ENST00000389048 EPS8L3Q8TE67 593 aaKnown RBP16.19■□□□□ 0.18
ALK-201ENST00000389048 FAM111AQ96PZ2 611 aa16.19■□□□□ 0.18
ALK-201ENST00000389048 ROGDIQ9GZN7 287 aa16.19■□□□□ 0.18
ALK-201ENST00000389048 FEN1P39748 380 aaKnown RBP16.19■□□□□ 0.18
ALK-201ENST00000389048 SLC44A4Q53GD3 710 aa16.19■□□□□ 0.18
ALK-201ENST00000389048 SH3TC2Q8TF17 1288 aa16.19■□□□□ 0.18
ALK-201ENST00000389048 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.19■□□□□ 0.18
ALK-201ENST00000389048 NPC1L1Q9UHC9 1359 aa16.19■□□□□ 0.18
ALK-201ENST00000389048 TOMM70O94826 608 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 ALBP02768 609 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 GTF2H1P32780 548 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 FXR1P51114 621 aaKnown RBP eCLIP16.18■□□□□ 0.18
ALK-201ENST00000389048 KHDRBS2Q5VWX1 349 aaKnown RBP16.18■□□□□ 0.18
ALK-201ENST00000389048 BARGINQ6ZT62 677 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 CCDC149Q6ZUS6 474 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 UTS2BQ765I0 119 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 LDHDQ86WU2 507 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 KLHL25Q9H0H3 589 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 TMA7Q9Y2S6 64 aaKnown RBP16.18■□□□□ 0.18
ALK-201ENST00000389048 ADGRL2O95490 1459 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 CYP2C19P33261 490 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 TRIM16LQ309B1 348 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 TRIM72Q6ZMU5 477 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 RTKN2Q8IZC4 609 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 AGGF1Q8N302 714 aaeCLIP16.18■□□□□ 0.18
ALK-201ENST00000389048 MROH7-TTC4A0A0A0MT08 1334 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 CPSF4O95639 269 aaKnown RBP16.18■□□□□ 0.18
ALK-201ENST00000389048 ZNF23P17027 643 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 DEFA1P59665 94 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 DEFA3P59666 94 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 E4F1Q66K89 784 aaPredicted RBP16.18■□□□□ 0.18
ALK-201ENST00000389048 NMD3Q96D46 503 aaKnown RBP16.18■□□□□ 0.18
ALK-201ENST00000389048 PMPCBO75439 489 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 POU4F1Q01851 419 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 JAMLQ86YT9 394 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 OPTNQ96CV9 577 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 ARHGEF3Q9NR81 526 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 LCMT1Q9UIC8 334 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 ABCC2Q92887 1545 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 STK36Q9NRP7 1315 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 CLASP2O75122 1294 aaKnown RBP16.18■□□□□ 0.18
ALK-201ENST00000389048 DSG1Q02413 1049 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 TAP1Q03518 808 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 NFIL3Q16649 462 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 PCYOX1LQ8NBM8 494 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 TNIP3Q96KP6 325 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 ACAD9Q9H845 621 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 GID8Q9NWU2 228 aa16.18■□□□□ 0.18
ALK-201ENST00000389048 SMG5Q9UPR3 1016 aaKnown RBP16.18■□□□□ 0.18
ALK-201ENST00000389048 RUVBL2Q9Y230 463 aaKnown RBP16.18■□□□□ 0.18
ALK-201ENST00000389048 AP3B1O00203 1094 aa16.17■□□□□ 0.18
ALK-201ENST00000389048 CSNK2BP67870 215 aa16.17■□□□□ 0.18
ALK-201ENST00000389048 OTUD4Q01804 1114 aaKnown RBP16.17■□□□□ 0.18
ALK-201ENST00000389048 E2F7Q96AV8 911 aa16.17■□□□□ 0.18
ALK-201ENST00000389048 NSL1Q96IY1 281 aa16.17■□□□□ 0.18
ALK-201ENST00000389048 KCNK16Q96T55 309 aa16.17■□□□□ 0.18
ALK-201ENST00000389048 KLK14Q9P0G3 267 aa16.17■□□□□ 0.18
ALK-201ENST00000389048 PALLDQ8WX93 1383 aa16.17■□□□□ 0.18
ALK-201ENST00000389048 STAT5BP51692 787 aa16.17■□□□□ 0.18
ALK-201ENST00000389048 SNRNP35Q16560 246 aaKnown RBP16.17■□□□□ 0.18
ALK-201ENST00000389048 DDI2Q5TDH0 399 aa16.17■□□□□ 0.18
ALK-201ENST00000389048 TBC1D19Q8N5T2 526 aa16.17■□□□□ 0.18
ALK-201ENST00000389048 ZNF560Q96MR9 790 aa16.17■□□□□ 0.18
ALK-201ENST00000389048 COQ7Q99807 217 aa16.17■□□□□ 0.18
ALK-201ENST00000389048 CTTNBP2Q8WZ74 1663 aa16.17■□□□□ 0.18
ALK-201ENST00000389048 SLC1A1P43005 524 aa16.17■□□□□ 0.18
ALK-201ENST00000389048 ATP12AP54707 1039 aa16.17■□□□□ 0.18
ALK-201ENST00000389048 SCARF1Q14162 830 aa16.17■□□□□ 0.18
ALK-201ENST00000389048 ZNF669Q96BR6 464 aaPredicted RBP16.17■□□□□ 0.18
ALK-201ENST00000389048 DTNBP1Q96EV8 351 aa16.17■□□□□ 0.18
ALK-201ENST00000389048 TSPAN17Q96FV3 270 aa16.17■□□□□ 0.18
ALK-201ENST00000389048 FAM107AO95990 144 aa16.17■□□□□ 0.18
ALK-201ENST00000389048 ALDH1A1P00352 501 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms