RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 ARMCX5Q6P1M9 558 aa15.3■□□□□ 0.04
SHOX-202ENST00000381575 GAREM2Q75VX8 874 aa15.3■□□□□ 0.04
SHOX-202ENST00000381575 STKLD1Q8NE28 680 aa15.3■□□□□ 0.04
SHOX-202ENST00000381575 HPS3Q969F9 1004 aa15.3■□□□□ 0.04
SHOX-202ENST00000381575 HVCN1Q96D96 273 aa15.3■□□□□ 0.04
SHOX-202ENST00000381575 ACCSQ96QU6 501 aa15.3■□□□□ 0.04
SHOX-202ENST00000381575 TSPAN18Q96SJ8 248 aa15.3■□□□□ 0.04
SHOX-202ENST00000381575 BACH2Q9BYV9 841 aa15.3■□□□□ 0.04
SHOX-202ENST00000381575 PCIF1Q9H4Z3 704 aa15.3■□□□□ 0.04
SHOX-202ENST00000381575 ASB7Q9H672 318 aa15.3■□□□□ 0.04
SHOX-202ENST00000381575 C2CD2Q9Y426 696 aa15.3■□□□□ 0.04
SHOX-202ENST00000381575 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.3■□□□□ 0.04
SHOX-202ENST00000381575 K7ELQ4 463 aaPredicted RBP15.29■□□□□ 0.04
SHOX-202ENST00000381575 LAMTOR5O43504 91 aa15.29■□□□□ 0.04
SHOX-202ENST00000381575 STX6O43752 255 aa15.29■□□□□ 0.04
SHOX-202ENST00000381575 PRPF6O94906 941 aaKnown RBP15.29■□□□□ 0.04
SHOX-202ENST00000381575 CYP11A1P05108 521 aa15.29■□□□□ 0.04
SHOX-202ENST00000381575 PSMC3P17980 439 aa15.29■□□□□ 0.04
SHOX-202ENST00000381575 ABCD1P33897 745 aa15.29■□□□□ 0.04
SHOX-202ENST00000381575 CYP4F8P98187 520 aa15.29■□□□□ 0.04
SHOX-202ENST00000381575 TFAMQ00059 246 aaKnown RBP15.29■□□□□ 0.04
SHOX-202ENST00000381575 CSTF1Q05048 431 aaKnown RBP15.29■□□□□ 0.04
SHOX-202ENST00000381575 PLD1Q13393 1074 aa15.29■□□□□ 0.04
SHOX-202ENST00000381575 STK38Q15208 465 aa15.29■□□□□ 0.04
SHOX-202ENST00000381575 TSSK4Q6SA08 328 aa15.29■□□□□ 0.04
SHOX-202ENST00000381575 ZNF852Q6ZMS4 543 aa15.29■□□□□ 0.04
SHOX-202ENST00000381575 CCDC73Q6ZRK6 1079 aa15.29■□□□□ 0.04
SHOX-202ENST00000381575 LRRTM3Q86VH5 581 aa15.29■□□□□ 0.04
SHOX-202ENST00000381575 SYCP3Q8IZU3 236 aa15.29■□□□□ 0.04
SHOX-202ENST00000381575 GLIS3Q8NEA6 775 aa15.29■□□□□ 0.04
SHOX-202ENST00000381575 FAM200AQ8TCP9 573 aa15.29■□□□□ 0.04
SHOX-202ENST00000381575 GIPC2Q8TF65 315 aa15.29■□□□□ 0.04
SHOX-202ENST00000381575 DNASE1L2Q92874 299 aa15.29■□□□□ 0.04
SHOX-202ENST00000381575 INTS4Q96HW7 963 aaKnown RBP15.29■□□□□ 0.04
SHOX-202ENST00000381575 CBWD1Q9BRT8 395 aa15.29■□□□□ 0.04
SHOX-202ENST00000381575 OXCT2Q9BYC2 517 aaPredicted RBP15.29■□□□□ 0.04
SHOX-202ENST00000381575 ZCWPW1Q9H0M4 648 aa15.29■□□□□ 0.04
SHOX-202ENST00000381575 PANK4Q9NVE7 773 aa15.29■□□□□ 0.04
SHOX-202ENST00000381575 TFIP11Q9UBB9 837 aaKnown RBP15.29■□□□□ 0.04
SHOX-202ENST00000381575 SEL1LQ9UBV2 794 aa15.29■□□□□ 0.04
SHOX-202ENST00000381575 CACNA1AO00555 2505 aa15.29■□□□□ 0.04
SHOX-202ENST00000381575 SDK1Q7Z5N4 2213 aa15.29■□□□□ 0.04
SHOX-202ENST00000381575 LMNAP02545 664 aaKnown RBP15.28■□□□□ 0.04
SHOX-202ENST00000381575 ATF6P18850 670 aa15.28■□□□□ 0.04
SHOX-202ENST00000381575 GABRR2P28476 465 aa15.28■□□□□ 0.04
SHOX-202ENST00000381575 POLR2BP30876 1174 aaKnown RBP15.28■□□□□ 0.04
SHOX-202ENST00000381575 CCDC142Q17RM4 750 aa15.28■□□□□ 0.04
SHOX-202ENST00000381575 FOXD4L6Q3SYB3 417 aaPredicted RBP15.28■□□□□ 0.04
SHOX-202ENST00000381575 MGAT5BQ3V5L5 792 aa15.28■□□□□ 0.04
SHOX-202ENST00000381575 LMBRD2Q68DH5 695 aaPredicted RBP15.28■□□□□ 0.04
SHOX-202ENST00000381575 FOXD4L3Q6VB84 417 aaPredicted RBP15.28■□□□□ 0.04
SHOX-202ENST00000381575 DNAJB7Q7Z6W7 309 aaPredicted RBP15.28■□□□□ 0.04
SHOX-202ENST00000381575 METTL23Q86XA0 190 aa15.28■□□□□ 0.04
SHOX-202ENST00000381575 LEMD2Q8NC56 503 aa15.28■□□□□ 0.04
SHOX-202ENST00000381575 TTC8Q8TAM2 541 aa15.28■□□□□ 0.04
SHOX-202ENST00000381575 BORCS6Q96GS4 357 aa15.28■□□□□ 0.04
SHOX-202ENST00000381575 MKNK1Q9BUB5 465 aa15.28■□□□□ 0.04
SHOX-202ENST00000381575 ATXN3LQ9H3M9 355 aa15.28■□□□□ 0.04
SHOX-202ENST00000381575 ABI2Q9NYB9 513 aaPredicted RBP15.28■□□□□ 0.04
SHOX-202ENST00000381575 PIAS3Q9Y6X2 628 aa15.28■□□□□ 0.04
SHOX-202ENST00000381575 DNAH14Q0VDD8 3507 aa15.28■□□□□ 0.04
SHOX-202ENST00000381575 ZNF263O14978 683 aa15.27■□□□□ 0.04
SHOX-202ENST00000381575 IL18RAPO95256 599 aa15.27■□□□□ 0.04
SHOX-202ENST00000381575 ITGB3P05106 788 aa15.27■□□□□ 0.04
SHOX-202ENST00000381575 SOX9P48436 509 aa15.27■□□□□ 0.04
SHOX-202ENST00000381575 FZD5Q13467 585 aa15.27■□□□□ 0.04
SHOX-202ENST00000381575 POSTNQ15063 836 aa15.27■□□□□ 0.04
SHOX-202ENST00000381575 GPR158Q5T848 1215 aa15.27■□□□□ 0.04
SHOX-202ENST00000381575 ARID3BQ8IVW6 561 aaPredicted RBP15.27■□□□□ 0.04
SHOX-202ENST00000381575 MFSD6LQ8IWD5 586 aa15.27■□□□□ 0.04
SHOX-202ENST00000381575 BRSK2Q8IWQ3 736 aa15.27■□□□□ 0.04
SHOX-202ENST00000381575 C1orf127Q8N9H9 656 aa15.27■□□□□ 0.04
SHOX-202ENST00000381575 IRF7Q92985 503 aa15.27■□□□□ 0.04
SHOX-202ENST00000381575 PSMG2Q969U7 264 aa15.27■□□□□ 0.04
SHOX-202ENST00000381575 CLDN23Q96B33 292 aa15.27■□□□□ 0.04
SHOX-202ENST00000381575 ZFYVE19Q96K21 471 aa15.27■□□□□ 0.04
SHOX-202ENST00000381575 LRRC3BQ96PB8 259 aa15.27■□□□□ 0.04
SHOX-202ENST00000381575 HINFPQ9BQA5 517 aa15.27■□□□□ 0.04
SHOX-202ENST00000381575 OSBPL6Q9BZF3 934 aa15.27■□□□□ 0.04
SHOX-202ENST00000381575 SMG9Q9H0W8 520 aaKnown RBP15.27■□□□□ 0.04
SHOX-202ENST00000381575 TRPV4Q9HBA0 871 aa15.27■□□□□ 0.04
SHOX-202ENST00000381575 OLFML3Q9NRN5 406 aa15.27■□□□□ 0.04
SHOX-202ENST00000381575 TMLHEQ9NVH6 421 aa15.27■□□□□ 0.04
SHOX-202ENST00000381575 RBAKQ9NYW8 714 aaPredicted RBP15.27■□□□□ 0.04
SHOX-202ENST00000381575 AGAP1Q9UPQ3 857 aa15.27■□□□□ 0.04
SHOX-202ENST00000381575 EXOC7Q9UPT5 735 aa15.27■□□□□ 0.04
SHOX-202ENST00000381575 ANAPC1Q9H1A4 1944 aa15.27■□□□□ 0.03
SHOX-202ENST00000381575 FRMD3A2A2Y4 597 aa15.26■□□□□ 0.03
SHOX-202ENST00000381575 SLC38A8A6NNN8 435 aa15.26■□□□□ 0.03
SHOX-202ENST00000381575 KPNA7A9QM74 516 aa15.26■□□□□ 0.03
SHOX-202ENST00000381575 HCRTO43612 131 aa15.26■□□□□ 0.03
SHOX-202ENST00000381575 PRAMEF12O95522 483 aa15.26■□□□□ 0.03
SHOX-202ENST00000381575 NASPP49321 788 aaPredicted RBP15.26■□□□□ 0.03
SHOX-202ENST00000381575 GPR15P49685 360 aa15.26■□□□□ 0.03
SHOX-202ENST00000381575 BFSP1Q12934 665 aa15.26■□□□□ 0.03
SHOX-202ENST00000381575 MTAPQ13126 283 aa15.26■□□□□ 0.03
SHOX-202ENST00000381575 SV2CQ496J9 727 aa15.26■□□□□ 0.03
SHOX-202ENST00000381575 SDHAF4Q5VUM1 108 aa15.26■□□□□ 0.03
SHOX-202ENST00000381575 ZC3H14Q6PJT7 736 aaKnown RBP15.26■□□□□ 0.03
SHOX-202ENST00000381575 YAF2Q8IY57 180 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms