RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 SYCE3A1L190 88 aa17.36■□□□□ 0.37
SNRPB-201ENST00000381342 FGFR1OPO95684 399 aaKnown RBP17.36■□□□□ 0.37
SNRPB-201ENST00000381342 CYP11A1P05108 521 aa17.36■□□□□ 0.37
SNRPB-201ENST00000381342 TYMPP19971 482 aa17.36■□□□□ 0.37
SNRPB-201ENST00000381342 CLCN4P51793 760 aa17.36■□□□□ 0.37
SNRPB-201ENST00000381342 MCCD1P59942 119 aaPredicted RBP17.36■□□□□ 0.37
SNRPB-201ENST00000381342 MRPL58Q14197 206 aaKnown RBP17.36■□□□□ 0.37
SNRPB-201ENST00000381342 SKOR2Q2VWA4 1001 aaPredicted RBP17.36■□□□□ 0.37
SNRPB-201ENST00000381342 ZNF699Q32M78 642 aa17.36■□□□□ 0.37
SNRPB-201ENST00000381342 CTXN3Q4LDR2 81 aa17.36■□□□□ 0.37
SNRPB-201ENST00000381342 CBWD6Q4V339 395 aa17.36■□□□□ 0.37
SNRPB-201ENST00000381342 HSP90AA4PQ58FG1 418 aa17.36■□□□□ 0.37
SNRPB-201ENST00000381342 CBWD3Q5JTY5 395 aa17.36■□□□□ 0.37
SNRPB-201ENST00000381342 CBWD5Q5RIA9 395 aa17.36■□□□□ 0.37
SNRPB-201ENST00000381342 WSCD1Q658N2 575 aa17.36■□□□□ 0.37
SNRPB-201ENST00000381342 OVOS1Q6IE37 1185 aa17.36■□□□□ 0.37
SNRPB-201ENST00000381342 PALB2Q86YC2 1186 aa17.36■□□□□ 0.37
SNRPB-201ENST00000381342 RNF135Q8IUD6 432 aa17.36■□□□□ 0.37
SNRPB-201ENST00000381342 TRIM59Q8IWR1 403 aa17.36■□□□□ 0.37
SNRPB-201ENST00000381342 TAS1R2Q8TE23 839 aa17.36■□□□□ 0.37
SNRPB-201ENST00000381342 SFXN1Q9H9B4 322 aa17.36■□□□□ 0.37
SNRPB-201ENST00000381342 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.36■□□□□ 0.371e-7■■■■■ 85.9
SNRPB-201ENST00000381342 GDAP2Q9NXN4 497 aa17.36■□□□□ 0.37
SNRPB-201ENST00000381342 FBXL5Q9UKA1 691 aa17.36■□□□□ 0.37
SNRPB-201ENST00000381342 BACE2Q9Y5Z0 518 aa17.36■□□□□ 0.37
SNRPB-201ENST00000381342 ARHGEF37A1IGU5 675 aa17.35■□□□□ 0.37
SNRPB-201ENST00000381342 LOC730098B7Z3J9 87 aa17.35■□□□□ 0.37
SNRPB-201ENST00000381342 H7C4K7 107 aa17.35■□□□□ 0.37
SNRPB-201ENST00000381342 TBC1D4O60343 1298 aa17.35■□□□□ 0.37
SNRPB-201ENST00000381342 STX10O60499 249 aa17.35■□□□□ 0.37
SNRPB-201ENST00000381342 GPR37L1O60883 481 aa17.35■□□□□ 0.37
SNRPB-201ENST00000381342 GNA14O95837 355 aa17.35■□□□□ 0.37
SNRPB-201ENST00000381342 GLUD1P00367 558 aa17.35■□□□□ 0.37
SNRPB-201ENST00000381342 GTF2H1P32780 548 aa17.35■□□□□ 0.37
SNRPB-201ENST00000381342 OR1D2P34982 312 aa17.35■□□□□ 0.37
SNRPB-201ENST00000381342 MARSP56192 900 aaKnown RBP17.35■□□□□ 0.37
SNRPB-201ENST00000381342 TNNC1P63316 161 aa17.35■□□□□ 0.37
SNRPB-201ENST00000381342 CT47A1Q5JQC4 288 aaPredicted RBP17.35■□□□□ 0.37
SNRPB-201ENST00000381342 KRT39Q6A163 491 aa17.35■□□□□ 0.37
SNRPB-201ENST00000381342 SCARA5Q6ZMJ2 495 aa17.35■□□□□ 0.37
SNRPB-201ENST00000381342 IRF2BP1Q8IU81 584 aa17.35■□□□□ 0.37
SNRPB-201ENST00000381342 PDCL2Q8N4E4 241 aa17.35■□□□□ 0.37
SNRPB-201ENST00000381342 KHSRPQ92945 711 aaKnown RBP eCLIP17.35■□□□□ 0.375e-8■□□□□ 10.2
SNRPB-201ENST00000381342 PI4K2AQ9BTU6 479 aa17.35■□□□□ 0.37
SNRPB-201ENST00000381342 DSEQ9UL01 958 aa17.35■□□□□ 0.37
SNRPB-201ENST00000381342 POLIQ9UNA4 740 aa17.35■□□□□ 0.37
SNRPB-201ENST00000381342 TGM5O43548 720 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 HUS1O60921 280 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 LRRN2O75325 713 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 OAZ2O95190 189 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 STAU1O95793 577 aaKnown RBP17.34■□□□□ 0.37
SNRPB-201ENST00000381342 SPATA31D3P0C874 917 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 CCDC192P0DO97 292 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 ATICP31939 592 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 ARPP19P56211 112 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 MYL7Q01449 175 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 ROR1Q01973 937 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 SOWAHAQ2M3V2 549 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 WDR72Q3MJ13 1102 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 ANO6Q4KMQ2 910 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 C2orf16Q68DN1 1984 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 SPOPLQ6IQ16 392 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 SLC8B1Q6J4K2 584 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 SPATA31D4Q6ZUB0 917 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 METTL23Q86XA0 190 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 CREBRFQ8IUR6 639 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 ADGRF2Q8IZF7 708 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 TOP6BLQ8N6T0 577 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 C12orf76Q8N812 135 aaPredicted RBP17.34■□□□□ 0.37
SNRPB-201ENST00000381342 TMEM209Q96SK2 561 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 MMS19Q96T76 1030 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 RTP3Q9BQQ7 232 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 THAP9Q9H5L6 903 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 NXF1Q9UBU9 619 aaKnown RBP17.34■□□□□ 0.37
SNRPB-201ENST00000381342 NFE2L3Q9Y4A8 694 aa17.34■□□□□ 0.37
SNRPB-201ENST00000381342 WDR27A2RRH5 827 aa17.33■□□□□ 0.36
SNRPB-201ENST00000381342 HCRTO43612 131 aa17.33■□□□□ 0.36
SNRPB-201ENST00000381342 C1RP00736 705 aa17.33■□□□□ 0.36
SNRPB-201ENST00000381342 ASS1P00966 412 aaKnown RBP17.33■□□□□ 0.36
SNRPB-201ENST00000381342 OR4Q2P0C623 313 aa17.33■□□□□ 0.36
SNRPB-201ENST00000381342 CPB1P15086 417 aa17.33■□□□□ 0.36
SNRPB-201ENST00000381342 COL9A1P20849 921 aa17.33■□□□□ 0.36
SNRPB-201ENST00000381342 FMO5P49326 533 aa17.33■□□□□ 0.36
SNRPB-201ENST00000381342 ZSCAN23Q3MJ62 389 aa17.33■□□□□ 0.36
SNRPB-201ENST00000381342 TMC5Q6UXY8 1006 aa17.33■□□□□ 0.36
SNRPB-201ENST00000381342 OSTM1Q86WC4 334 aa17.33■□□□□ 0.36
SNRPB-201ENST00000381342 OR10T2Q8NGX3 314 aa17.33■□□□□ 0.36
SNRPB-201ENST00000381342 HDAC7Q8WUI4 952 aa17.33■□□□□ 0.36
SNRPB-201ENST00000381342 KBTBD7Q8WVZ9 684 aa17.33■□□□□ 0.36
SNRPB-201ENST00000381342 SEMA4DQ92854 862 aa17.33■□□□□ 0.36
SNRPB-201ENST00000381342 LRFN3Q9BTN0 628 aa17.33■□□□□ 0.36
SNRPB-201ENST00000381342 FUCA2Q9BTY2 467 aa17.33■□□□□ 0.36
SNRPB-201ENST00000381342 PLEKHA4Q9H4M7 779 aa17.33■□□□□ 0.36
SNRPB-201ENST00000381342 SMYD3Q9H7B4 428 aa17.33■□□□□ 0.36
SNRPB-201ENST00000381342 VRTNQ9H8Y1 702 aa17.33■□□□□ 0.36
SNRPB-201ENST00000381342 MAN1C1Q9NR34 630 aa17.33■□□□□ 0.36
SNRPB-201ENST00000381342 SAMSN1Q9NSI8 373 aaKnown RBP17.33■□□□□ 0.36
SNRPB-201ENST00000381342 MUTYHQ9UIF7 546 aa17.33■□□□□ 0.36
SNRPB-201ENST00000381342 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.33■□□□□ 0.36
SNRPB-201ENST00000381342 OR6C75A6NL08 312 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms