RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 ABTB1Q969K4 478 aaPredicted RBP14.62□□□□□ -0.07
SDC1-202ENST00000381150 MARCOQ9UEW3 520 aaPredicted RBP14.62□□□□□ -0.07
SDC1-202ENST00000381150 H3BRJ5 948 aa14.62□□□□□ -0.07
SDC1-202ENST00000381150 IZUMO2Q6UXV1 221 aa14.62□□□□□ -0.07
SDC1-202ENST00000381150 TTC7BQ86TV6 843 aa14.62□□□□□ -0.07
SDC1-202ENST00000381150 LRRC6Q86X45 466 aa14.62□□□□□ -0.07
SDC1-202ENST00000381150 ACSF2Q96CM8 615 aaPredicted RBP14.62□□□□□ -0.07
SDC1-202ENST00000381150 CLPTM1LQ96KA5 538 aa14.62□□□□□ -0.07
SDC1-202ENST00000381150 MIPEPQ99797 713 aa14.62□□□□□ -0.07
SDC1-202ENST00000381150 LXNQ9BS40 222 aa14.62□□□□□ -0.07
SDC1-202ENST00000381150 TRAIPQ9BWF2 469 aa14.62□□□□□ -0.07
SDC1-202ENST00000381150 EHMT1Q9H9B1 1298 aa14.62□□□□□ -0.07
SDC1-202ENST00000381150 KCNH7Q9NS40 1196 aa14.62□□□□□ -0.07
SDC1-202ENST00000381150 CREB3O43889 395 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 STK10O94804 968 aaKnown RBP14.61□□□□□ -0.07
SDC1-202ENST00000381150 ENO1P06733 434 aaKnown RBP14.61□□□□□ -0.07
SDC1-202ENST00000381150 PGM1P36871 562 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 CCNFP41002 786 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 FOXB2Q5VYV0 432 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 PASD1Q8IV76 773 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 DHX38Q92620 1227 aaKnown RBP14.61□□□□□ -0.07
SDC1-202ENST00000381150 NMD3Q96D46 503 aaKnown RBP14.61□□□□□ -0.07
SDC1-202ENST00000381150 TMEM109Q9BVC6 243 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 TEKT3Q9BXF9 490 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 GRID1Q9ULK0 1009 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 SKIV2L2P42285 1042 aaKnown RBP14.61□□□□□ -0.07
SDC1-202ENST00000381150 YARSP54577 528 aaKnown RBP14.61□□□□□ -0.07
SDC1-202ENST00000381150 MRPS9P82933 396 aaKnown RBP14.61□□□□□ -0.07
SDC1-202ENST00000381150 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.61□□□□□ -0.07
SDC1-202ENST00000381150 PCNX4Q63HM2 1172 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 NOP9Q86U38 636 aaKnown RBP14.61□□□□□ -0.07
SDC1-202ENST00000381150 CPA5Q8WXQ8 436 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 RBM41Q96IZ5 413 aaKnown RBP14.61□□□□□ -0.07
SDC1-202ENST00000381150 NDNQ99608 321 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 ZNF341Q9BYN7 854 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 TMEM117Q9H0C3 514 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.61□□□□□ -0.07
SDC1-202ENST00000381150 ARHGAP42A6NI28 874 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 CCDC22O60826 627 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 TJP3O95049 919 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 EGFRP00533 1210 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 PYGBP11216 843 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 KRT10P13645 584 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 OLFML2BQ68BL8 750 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 CLNKQ7Z7G1 428 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 HERPUD2Q9BSE4 406 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 SMYD3Q9H7B4 428 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 KIAA1586Q9HCI6 787 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 AGPAT3Q9NRZ7 376 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 CCPG1Q9ULG6 757 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 PCDHA3Q9Y5H8 950 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 UBE4BO95155 1302 aa14.61□□□□□ -0.07
SDC1-202ENST00000381150 ANKRD33BA6NCL7 494 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 K7ENM7 598 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 WFS1O76024 890 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 ARFIP2P53365 341 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 SLC34A1Q06495 639 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 DGKZQ13574 1117 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 TBC1D25Q3MII6 688 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 WASHC2DQ5SRD0 308 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 CEP128Q6ZU80 1094 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 ZNF75CPQ92670 426 aaPredicted RBP14.6□□□□□ -0.07
SDC1-202ENST00000381150 C10orf88Q9H8K7 445 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 MYOZ2Q9NPC6 264 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 UBIAD1Q9Y5Z9 338 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 AMPD1P23109 780 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 MTHFD1LQ6UB35 978 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 NIPA1Q7RTP0 329 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 NIM1KQ8IY84 436 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 ZSWIM2Q8NEG5 633 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 FAM81AQ8TBF8 368 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 THTPAQ9BU02 230 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 GPR88Q9GZN0 384 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 TMEM165Q9HC07 324 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 WHRNQ9P202 907 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 STARD13Q9Y3M8 1113 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 NEU2Q9Y3R4 380 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 MAGEA13PA6NCF6 341 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 B2RBV5 119 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 EDF1O60869 148 aaKnown RBP14.6□□□□□ -0.07
SDC1-202ENST00000381150 PSMG1O95456 288 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 DYNLT1P63172 113 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 BFSP1Q12934 665 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 GPS1Q13098 491 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 SPP2Q13103 211 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 RASA3Q14644 834 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 LBRQ14739 615 aaKnown RBP14.6□□□□□ -0.07
SDC1-202ENST00000381150 STAT4Q14765 748 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 OR52E8Q6IFG1 317 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 SLC9A9Q8IVB4 645 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 INPP5DQ92835 1189 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 CCDC124Q96CT7 223 aaKnown RBP14.6□□□□□ -0.07
SDC1-202ENST00000381150 SYT11Q9BT88 431 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 SHCBP1LQ9BZQ2 653 aa14.6□□□□□ -0.07
SDC1-202ENST00000381150 ATP8B3O60423 1300 aa14.59□□□□□ -0.07
SDC1-202ENST00000381150 CCDC195A0A1B0GUA6 201 aa14.59□□□□□ -0.07
SDC1-202ENST00000381150 ASMTLO95671 621 aa14.59□□□□□ -0.07
SDC1-202ENST00000381150 LMNAP02545 664 aaKnown RBP14.59□□□□□ -0.07
SDC1-202ENST00000381150 ANXA13P27216 316 aa14.59□□□□□ -0.07
SDC1-202ENST00000381150 PSMC4P43686 418 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms