RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 FAF2Q96CS3 445 aa13.21□□□□□ -0.3
CDX2-201ENST00000381020 CFAP36Q96G28 342 aa13.21□□□□□ -0.3
CDX2-201ENST00000381020 NT5C1AQ9BXI3 368 aa13.21□□□□□ -0.3
CDX2-201ENST00000381020 HES2Q9Y543 173 aa13.21□□□□□ -0.3
CDX2-201ENST00000381020 PROSCO94903 275 aa13.2□□□□□ -0.3
CDX2-201ENST00000381020 CST3P01034 146 aaPredicted RBP13.2□□□□□ -0.3
CDX2-201ENST00000381020 ZPBP2Q6X784 338 aa13.2□□□□□ -0.3
CDX2-201ENST00000381020 PLEKHO2Q8TD55 490 aa13.2□□□□□ -0.3
CDX2-201ENST00000381020 PPM1EQ8WY54 764 aa13.2□□□□□ -0.3
CDX2-201ENST00000381020 SYT17Q9BSW7 474 aa13.2□□□□□ -0.3
CDX2-201ENST00000381020 DPP3Q9NY33 737 aa13.2□□□□□ -0.3
CDX2-201ENST00000381020 SLX4Q8IY92 1834 aa13.2□□□□□ -0.3
CDX2-201ENST00000381020 UMODL1Q5DID0 1318 aa13.2□□□□□ -0.3
CDX2-201ENST00000381020 ALDH3A1P30838 453 aa13.2□□□□□ -0.3
CDX2-201ENST00000381020 GTF2A2P52657 109 aa13.2□□□□□ -0.3
CDX2-201ENST00000381020 RCOR2Q8IZ40 523 aa13.2□□□□□ -0.3
CDX2-201ENST00000381020 CHST7Q9NS84 486 aa13.2□□□□□ -0.3
CDX2-201ENST00000381020 RGS17Q9UGC6 210 aaPredicted RBP13.2□□□□□ -0.3
CDX2-201ENST00000381020 CREB3O43889 395 aa13.2□□□□□ -0.3
CDX2-201ENST00000381020 IL18RAPO95256 599 aa13.2□□□□□ -0.3
CDX2-201ENST00000381020 LGALS2P05162 132 aa13.2□□□□□ -0.3
CDX2-201ENST00000381020 MDH1P40925 334 aaKnown RBP13.2□□□□□ -0.3
CDX2-201ENST00000381020 MSH2P43246 934 aa13.2□□□□□ -0.3
CDX2-201ENST00000381020 ARPP19P56211 112 aa13.2□□□□□ -0.3
CDX2-201ENST00000381020 NME3Q13232 169 aa13.2□□□□□ -0.3
CDX2-201ENST00000381020 C11orf63Q6NUN7 778 aa13.2□□□□□ -0.3
CDX2-201ENST00000381020 MFSD14AQ96MC6 490 aa13.2□□□□□ -0.3
CDX2-201ENST00000381020 ARHGAP28Q9P2N2 729 aa13.2□□□□□ -0.3
CDX2-201ENST00000381020 GMNCA6NCL1 334 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 LACTBL1A8MY62 500 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 F8VP50 259 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 MAFO75444 373 aaPredicted RBP13.19□□□□□ -0.3
CDX2-201ENST00000381020 SAT1P21673 171 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 LSP1P33241 339 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 EIF3EP60228 445 aaKnown RBP13.19□□□□□ -0.3
CDX2-201ENST00000381020 MXRA7P84157 204 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 PIGHQ14442 188 aaPredicted RBP13.19□□□□□ -0.3
CDX2-201ENST00000381020 PLEKHH3Q7Z736 793 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 C12orf56Q8IXR9 622 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 CCDC197Q8NCU1 140 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 HELQQ8TDG4 1101 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 HES6Q96HZ4 224 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 SPAG7O75391 227 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 SYF2O95926 243 aaKnown RBP13.19□□□□□ -0.3
CDX2-201ENST00000381020 AKAP5P24588 427 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 RPL7AP62424 266 aaKnown RBP13.19□□□□□ -0.3
CDX2-201ENST00000381020 TFDP2Q14188 446 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 ZNF484Q5JVG2 852 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 NLRP14Q86W24 1093 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 KIAA0319LQ8IZA0 1049 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 RNPEPQ9H4A4 650 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 CNOT10Q9H9A5 744 aaKnown RBP13.19□□□□□ -0.3
CDX2-201ENST00000381020 GDF3Q9NR23 364 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 NRAPQ86VF7 1730 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 RPL21P46778 160 aaKnown RBP13.19□□□□□ -0.3
CDX2-201ENST00000381020 PPIL2Q13356 520 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 TAF12Q16514 161 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 EPS8L3Q8TE67 593 aaKnown RBP13.19□□□□□ -0.3
CDX2-201ENST00000381020 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.19□□□□□ -0.3
CDX2-201ENST00000381020 TRAIPQ9BWF2 469 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 ERVK-5Q9HDB9 667 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 SNTG2Q9NY99 539 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 KLHL14Q9P2G3 628 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 STK38LQ9Y2H1 464 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 RPTORQ8N122 1335 aa13.19□□□□□ -0.3
CDX2-201ENST00000381020 EIF3HO15372 352 aaKnown RBP eCLIP13.18□□□□□ -0.3
CDX2-201ENST00000381020 CAND2O75155 1236 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 RBP3P10745 1247 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 SLC26A2P50443 739 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 FAM133BQ5BKY9 247 aaKnown RBP13.18□□□□□ -0.3
CDX2-201ENST00000381020 JADE1Q6IE81 842 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 ARHGEF18Q6ZSZ5 1173 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 PRUNE1Q86TP1 453 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 LRRC57Q8N9N7 239 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 CCHCR1Q8TD31 782 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 TSNARE1Q96NA8 513 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 PABPC3Q9H361 631 aaKnown RBP13.18□□□□□ -0.3
CDX2-201ENST00000381020 DHX33Q9H6R0 707 aaKnown RBP13.18□□□□□ -0.3
CDX2-201ENST00000381020 C10orf88Q9H8K7 445 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 PCDHA3Q9Y5H8 950 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 SCN7AQ01118 1682 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 MYPNQ86TC9 1320 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 A0A0B4J269 797 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 TRIM66O15016 1216 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 NFICP08651 508 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 ITIH2P19823 946 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 IRX4P78413 519 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 RNASELQ05823 741 aaKnown RBP13.18□□□□□ -0.3
CDX2-201ENST00000381020 PTPN11Q06124 597 aaPredicted RBP13.18□□□□□ -0.3
CDX2-201ENST00000381020 GRIK4Q16099 956 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 PRELID2Q8N945 189 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 LRRC8CQ8TDW0 803 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 CAVIN3Q969G5 261 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 CCT8L2Q96SF2 557 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 TMEM121Q9BTD3 319 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 TXNRD2Q9NNW7 524 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 GPATCH2LQ9NWQ4 482 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 GGT7Q9UJ14 662 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 NEU2Q9Y3R4 380 aa13.18□□□□□ -0.3
CDX2-201ENST00000381020 GOLGA8RI6L899 631 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms