RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 ALS2Q96Q42 1657 aa12.88□□□□□ -0.35
GABPB1-203ENST00000380877 KPNA6O60684 536 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 AKR1A1P14550 325 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 RAP1GAPP47736 663 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 BOLA3Q53S33 107 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 ABRAQ8N0Z2 381 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 ACSF2Q96CM8 615 aaPredicted RBP12.87□□□□□ -0.35
GABPB1-203ENST00000380877 TTC1Q99614 292 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 ASB7Q9H672 318 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 MID2Q9UJV3 735 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 ARHGAP42A6NI28 874 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 SPDYE5A6NIY4 337 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 ATICP31939 592 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 UGCGQ16739 394 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 COBLL1Q53SF7 1204 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 LBX2Q6XYB7 198 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 SOCS4Q8WXH5 440 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 ISCUQ9H1K1 167 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 SNTG2Q9NY99 539 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.87□□□□□ -0.352e-6■■■■■ 28.7
GABPB1-203ENST00000380877 HPCAL4Q9UM19 191 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 ATRNL1Q5VV63 1379 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 EPHB6O15197 1021 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 PAMP19021 973 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 COILP38432 576 aaPredicted RBP12.87□□□□□ -0.35
GABPB1-203ENST00000380877 CLEC16AQ2KHT3 1053 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 ANO5Q75V66 913 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 DCP1BQ8IZD4 617 aaKnown RBP12.87□□□□□ -0.35
GABPB1-203ENST00000380877 DCLK2Q8N568 766 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 SLC7A14Q8TBB6 771 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 ARHGEF26Q96DR7 871 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 KCTD10Q9H3F6 313 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 SKIP12755 728 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 SLC9A9Q8IVB4 645 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 ZNF606Q8WXB4 792 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 HDAC11Q96DB2 347 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 RAB3IPQ96QF0 476 aaPredicted RBP12.87□□□□□ -0.35
GABPB1-203ENST00000380877 PNKPQ96T60 521 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 ELAC2Q9BQ52 826 aaKnown RBP12.87□□□□□ -0.35
GABPB1-203ENST00000380877 PITPNM3Q9BZ71 974 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 SP110Q9HB58 689 aa12.87□□□□□ -0.35
GABPB1-203ENST00000380877 CFAP69A5D8W1 941 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 LYPLA2O95372 231 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 LSM8O95777 96 aaKnown RBP12.86□□□□□ -0.35
GABPB1-203ENST00000380877 KRT10P13645 584 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 DLG4P78352 724 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 CENPCQ03188 943 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 MFSD10Q14728 455 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 STAT4Q14765 748 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 TAF1BQ53T94 588 aaPredicted RBP12.86□□□□□ -0.35
GABPB1-203ENST00000380877 MEI1Q5TIA1 1274 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 ELMSAN1Q6PJG2 1045 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 FAM47EQ6ZV65 393 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 ANKMY2Q8IV38 441 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.86□□□□□ -0.35
GABPB1-203ENST00000380877 DFFAO00273 331 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 PSTPIP1O43586 416 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 YY1P25490 414 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 CLK2P49760 499 aaKnown RBP12.86□□□□□ -0.35
GABPB1-203ENST00000380877 SYCP2LQ5T4T6 812 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 FAM117BQ6P1L5 589 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 TAF2Q6P1X5 1199 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 RAB44Q7Z6P3 723 aaPredicted RBP12.86□□□□□ -0.35
GABPB1-203ENST00000380877 IRF2BP1Q8IU81 584 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 RIN2Q8WYP3 895 aaPredicted RBP12.86□□□□□ -0.35
GABPB1-203ENST00000380877 TMEM176AQ96HP8 235 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 TMEM134Q9H6X4 195 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 RPLP2P05387 115 aaKnown RBP12.86□□□□□ -0.35
GABPB1-203ENST00000380877 MX2P20592 715 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 FNTAP49354 379 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 SESN2P58004 480 aaPredicted RBP12.86□□□□□ -0.35
GABPB1-203ENST00000380877 MAPK7Q13164 816 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 RCN2Q14257 317 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 BMT2Q1RMZ1 405 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 CCDC38Q502W7 563 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 FBXO47Q5MNV8 452 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 SLC27A1Q6PCB7 646 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 TRMT10CQ7L0Y3 403 aaKnown RBP12.86□□□□□ -0.35
GABPB1-203ENST00000380877 ELMOD1Q8N336 334 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 PDCD6IPQ8WUM4 868 aaKnown RBP12.86□□□□□ -0.35
GABPB1-203ENST00000380877 KAT5Q92993 513 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 TJP2Q9UDY2 1190 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 NEU2Q9Y3R4 380 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 CYB561D2O14569 222 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 USP2O75604 605 aaPredicted RBP12.86□□□□□ -0.35
GABPB1-203ENST00000380877 PROSCO94903 275 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 THP07101 528 aa12.86□□□□□ -0.35
GABPB1-203ENST00000380877 MTG1Q9BT17 334 aaPredicted RBP12.86□□□□□ -0.35
GABPB1-203ENST00000380877 DMGDHQ9UI17 866 aaKnown RBP12.86□□□□□ -0.35
GABPB1-203ENST00000380877 TPX2Q9ULW0 747 aaKnown RBP12.86□□□□□ -0.35
GABPB1-203ENST00000380877 TGFB1I1O43294 461 aa12.85□□□□□ -0.35
GABPB1-203ENST00000380877 CCNE2O96020 404 aa12.85□□□□□ -0.35
GABPB1-203ENST00000380877 ADRB2P07550 413 aa12.85□□□□□ -0.35
GABPB1-203ENST00000380877 ODC1P11926 461 aa12.85□□□□□ -0.35
GABPB1-203ENST00000380877 ACO1P21399 889 aaKnown RBP12.85□□□□□ -0.35
GABPB1-203ENST00000380877 KCNMA1Q12791 1236 aa12.85□□□□□ -0.35
GABPB1-203ENST00000380877 GJC2Q5T442 439 aaPredicted RBP12.85□□□□□ -0.35
GABPB1-203ENST00000380877 FOXR2Q6PJQ5 311 aa12.85□□□□□ -0.35
GABPB1-203ENST00000380877 ZNF410Q86VK4 478 aa12.85□□□□□ -0.35
GABPB1-203ENST00000380877 SH2D3CQ8N5H7 860 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms