RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 C2CD2Q9Y426 696 aa24.52■■□□□ 1.52
VPS16-201ENST00000380443 SHOX2O60902 331 aaPredicted RBP24.51■■□□□ 1.51
VPS16-201ENST00000380443 ECEL1O95672 775 aa24.51■■□□□ 1.51
VPS16-201ENST00000380443 ZNF286BP0CG31 522 aa24.51■■□□□ 1.51
VPS16-201ENST00000380443 OSTNP61366 133 aa24.51■■□□□ 1.51
VPS16-201ENST00000380443 SGO2Q562F6 1265 aa24.51■■□□□ 1.51
VPS16-201ENST00000380443 TTMPQ5BVD1 217 aa24.51■■□□□ 1.51
VPS16-201ENST00000380443 TTC27Q6P3X3 843 aa24.51■■□□□ 1.51
VPS16-201ENST00000380443 CPNE8Q86YQ8 564 aa24.51■■□□□ 1.51
VPS16-201ENST00000380443 ARL8AQ96BM9 186 aa24.51■■□□□ 1.51
VPS16-201ENST00000380443 A0A1B0GUA9 196 aa24.51■■□□□ 1.51
VPS16-201ENST00000380443 H0YGN5 161 aa24.51■■□□□ 1.51
VPS16-201ENST00000380443 ARF4P18085 180 aaPredicted RBP24.51■■□□□ 1.51
VPS16-201ENST00000380443 TM4SF4P48230 202 aa24.51■■□□□ 1.51
VPS16-201ENST00000380443 DHX9Q08211 1270 aaKnown RBP24.51■■□□□ 1.51
VPS16-201ENST00000380443 DCAF4L1Q3SXM0 396 aa24.51■■□□□ 1.51
VPS16-201ENST00000380443 DNAJC24Q6P3W2 148 aa24.51■■□□□ 1.51
VPS16-201ENST00000380443 ERICH1Q86X53 443 aa24.51■■□□□ 1.51
VPS16-201ENST00000380443 C1orf127Q8N9H9 656 aa24.51■■□□□ 1.51
VPS16-201ENST00000380443 NLRP7Q8WX94 980 aa24.51■■□□□ 1.51
VPS16-201ENST00000380443 ZNF668Q96K58 619 aaPredicted RBP24.51■■□□□ 1.51
VPS16-201ENST00000380443 TRIM7Q9C029 511 aa24.51■■□□□ 1.51
VPS16-201ENST00000380443 WBP1LQ9NX94 342 aa24.51■■□□□ 1.51
VPS16-201ENST00000380443 SIX4Q9UIU6 781 aa24.51■■□□□ 1.51
VPS16-201ENST00000380443 ITGA11Q9UKX5 1188 aa24.51■■□□□ 1.51
VPS16-201ENST00000380443 NFS1Q9Y697 457 aa24.51■■□□□ 1.51
VPS16-201ENST00000380443 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.5■■□□□ 1.51
VPS16-201ENST00000380443 TCRBV5S1A1TA0A578 114 aa24.5■■□□□ 1.51
VPS16-201ENST00000380443 WEE2P0C1S8 567 aa24.5■■□□□ 1.51
VPS16-201ENST00000380443 MYZAPP0CAP1 466 aa24.5■■□□□ 1.51
VPS16-201ENST00000380443 BRD2P25440 801 aaKnown RBP24.5■■□□□ 1.51
VPS16-201ENST00000380443 PIGHQ14442 188 aaPredicted RBP24.5■■□□□ 1.51
VPS16-201ENST00000380443 UAP1Q16222 522 aaPredicted RBP24.5■■□□□ 1.51
VPS16-201ENST00000380443 RCOR2Q8IZ40 523 aa24.5■■□□□ 1.51
VPS16-201ENST00000380443 RBM41Q96IZ5 413 aaKnown RBP24.5■■□□□ 1.51
VPS16-201ENST00000380443 ATP6V1G3Q96LB4 118 aa24.5■■□□□ 1.51
VPS16-201ENST00000380443 TMBIM4Q9HC24 238 aa24.5■■□□□ 1.51
VPS16-201ENST00000380443 WDR35Q9P2L0 1181 aa24.5■■□□□ 1.51
VPS16-201ENST00000380443 NFICP08651 508 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 KRT19P08727 400 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 GSCP56915 257 aaPredicted RBP24.49■■□□□ 1.51
VPS16-201ENST00000380443 JADE1Q6IE81 842 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 CROCCP2Q86T23 111 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 NIPA2Q8N8Q9 360 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 C3orf20Q8ND61 904 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 ZBTB10Q96DT7 871 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 ACAP3Q96P50 834 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 TRIM31Q9BZY9 425 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 TSPYL1Q9H0U9 437 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 GRHL1Q9NZI5 618 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 DERAQ9Y315 318 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 SNX24Q9Y343 169 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 TCRBV7S2A1N4TA0A589 114 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 CA12O43570 354 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 TSPAN1O60635 241 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 KRT14P02533 472 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 VTNP04004 478 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 IVLP07476 585 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 COPS2P61201 443 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 TMEM132DQ14C87 1099 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 SLC10A6Q3KNW5 377 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 CEP85LQ5SZL2 805 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 MARCH8Q5T0T0 291 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 SCARA3Q6AZY7 606 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 KIAA0319LQ8IZA0 1049 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 UBLCP1Q8WVY7 318 aaPredicted RBP24.49■■□□□ 1.51
VPS16-201ENST00000380443 PLEKHA5Q9HAU0 1116 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 WHRNQ9P202 907 aa24.49■■□□□ 1.51
VPS16-201ENST00000380443 NXF1Q9UBU9 619 aaKnown RBP24.49■■□□□ 1.51
VPS16-201ENST00000380443 ZHX1Q9UKY1 873 aaPredicted RBP24.49■■□□□ 1.51
VPS16-201ENST00000380443 GRM5P41594 1212 aa24.48■■□□□ 1.51
VPS16-201ENST00000380443 RBP5P82980 135 aa24.48■■□□□ 1.51
VPS16-201ENST00000380443 SLMAPQ14BN4 828 aa24.48■■□□□ 1.51
VPS16-201ENST00000380443 CCNG2Q16589 344 aa24.48■■□□□ 1.51
VPS16-201ENST00000380443 WDR72Q3MJ13 1102 aa24.48■■□□□ 1.51
VPS16-201ENST00000380443 PPP1R15BQ5SWA1 713 aa24.48■■□□□ 1.51
VPS16-201ENST00000380443 AGBL2Q5U5Z8 902 aa24.48■■□□□ 1.51
VPS16-201ENST00000380443 ZDHHC24Q6UX98 284 aa24.48■■□□□ 1.51
VPS16-201ENST00000380443 CDR2LQ86X02 465 aaPredicted RBP24.48■■□□□ 1.51
VPS16-201ENST00000380443 TMEM192Q8IY95 271 aa24.48■■□□□ 1.51
VPS16-201ENST00000380443 CXorf38Q8TB03 319 aa24.48■■□□□ 1.51
VPS16-201ENST00000380443 ZBTB9Q96C00 473 aa24.48■■□□□ 1.51
VPS16-201ENST00000380443 SCLT1Q96NL6 688 aa24.48■■□□□ 1.51
VPS16-201ENST00000380443 CALCOCO1Q9P1Z2 691 aa24.48■■□□□ 1.51
VPS16-201ENST00000380443 PRDM4Q9UKN5 801 aa24.48■■□□□ 1.51
VPS16-201ENST00000380443 KIAA1257Q9ULG3 409 aa24.48■■□□□ 1.51
VPS16-201ENST00000380443 A6NJR5 290 aa24.47■■□□□ 1.51
VPS16-201ENST00000380443 GAS8O95995 478 aa24.47■■□□□ 1.51
VPS16-201ENST00000380443 PLTPP55058 493 aa24.47■■□□□ 1.51
VPS16-201ENST00000380443 CAV1Q03135 178 aa24.47■■□□□ 1.51
VPS16-201ENST00000380443 DCUN1D2Q6PH85 259 aa24.47■■□□□ 1.51
VPS16-201ENST00000380443 KDM7AQ6ZMT4 941 aa24.47■■□□□ 1.51
VPS16-201ENST00000380443 PHLDB2Q86SQ0 1253 aa24.47■■□□□ 1.51
VPS16-201ENST00000380443 ARFGAP2Q8N6H7 521 aa24.47■■□□□ 1.51
VPS16-201ENST00000380443 ATL2Q8NHH9 583 aa24.47■■□□□ 1.51
VPS16-201ENST00000380443 TFAP2BQ92481 460 aa24.47■■□□□ 1.51
VPS16-201ENST00000380443 ART4Q93070 314 aa24.47■■□□□ 1.51
VPS16-201ENST00000380443 PTPN18Q99952 460 aa24.47■■□□□ 1.51
VPS16-201ENST00000380443 DDX56Q9NY93 547 aaKnown RBP24.47■■□□□ 1.51
VPS16-201ENST00000380443 CWC15Q9P013 229 aaKnown RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms