RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 GUCY2DQ02846 1103 aa21.09■□□□□ 0.97
PDLIM5-205ENST00000380180 CASP8Q14790 479 aa21.09■□□□□ 0.97
PDLIM5-205ENST00000380180 GLRA4Q5JXX5 417 aa21.09■□□□□ 0.97
PDLIM5-205ENST00000380180 UBXN11Q5T124 520 aa21.09■□□□□ 0.97
PDLIM5-205ENST00000380180 ADAT2Q7Z6V5 191 aaKnown RBP21.09■□□□□ 0.97
PDLIM5-205ENST00000380180 IFT20Q8IY31 132 aa21.09■□□□□ 0.97
PDLIM5-205ENST00000380180 TMEM176AQ96HP8 235 aa21.09■□□□□ 0.97
PDLIM5-205ENST00000380180 ELOVL4Q9GZR5 314 aa21.09■□□□□ 0.97
PDLIM5-205ENST00000380180 GDF3Q9NR23 364 aa21.09■□□□□ 0.97
PDLIM5-205ENST00000380180 RNF19AQ9NV58 838 aa21.09■□□□□ 0.97
PDLIM5-205ENST00000380180 PARVAQ9NVD7 372 aa21.09■□□□□ 0.97
PDLIM5-205ENST00000380180 SCINQ9Y6U3 715 aa21.09■□□□□ 0.97
PDLIM5-205ENST00000380180 MED7O43513 233 aa21.08■□□□□ 0.97
PDLIM5-205ENST00000380180 CALB1P05937 261 aa21.08■□□□□ 0.97
PDLIM5-205ENST00000380180 SLC1A1P43005 524 aa21.08■□□□□ 0.97
PDLIM5-205ENST00000380180 SP3Q02447 781 aa21.08■□□□□ 0.97
PDLIM5-205ENST00000380180 CLUL1Q15846 466 aa21.08■□□□□ 0.97
PDLIM5-205ENST00000380180 GDF6Q6KF10 455 aaPredicted RBP21.08■□□□□ 0.97
PDLIM5-205ENST00000380180 DENND1BQ6P3S1 775 aa21.08■□□□□ 0.97
PDLIM5-205ENST00000380180 C18orf25Q96B23 403 aaPredicted RBP21.08■□□□□ 0.97
PDLIM5-205ENST00000380180 RNF186Q9NXI6 227 aa21.08■□□□□ 0.97
PDLIM5-205ENST00000380180 CNTN3Q9P232 1028 aa21.08■□□□□ 0.97
PDLIM5-205ENST00000380180 TUBGCP4Q9UGJ1 667 aa21.08■□□□□ 0.97
PDLIM5-205ENST00000380180 CEP83Q9Y592 693 aa21.08■□□□□ 0.97
PDLIM5-205ENST00000380180 TLR3O15455 904 aaKnown RBP21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 GJB6O95452 261 aa21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 TNFRSF8P28908 595 aa21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 CCND3P30281 292 aaPredicted RBP21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 RWDD2BP57060 319 aa21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 NKX3-2P78367 333 aa21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 PTPN11Q06124 597 aaPredicted RBP21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 MYO1EQ12965 1108 aa21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 ERICH1Q86X53 443 aa21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 AENQ8WTP8 325 aaKnown RBP21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 GDAP1L1Q96MZ0 367 aa21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 LHX5Q9H2C1 402 aa21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 RNF39Q9H2S5 420 aa21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 PPEF2O14830 753 aa21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 ADAMTS4O75173 837 aa21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 PROSCO94903 275 aa21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 ELNP15502 786 aa21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 DEFB115Q30KQ5 88 aa21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 SEL1L2Q5TEA6 688 aa21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 BEST2Q8NFU1 509 aa21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 FEZF2Q8TBJ5 459 aa21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 XPNPEP3Q9NQH7 507 aa21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 KLK14Q9P0G3 267 aa21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 BARX2Q9UMQ3 279 aaPredicted RBP21.07■□□□□ 0.96
PDLIM5-205ENST00000380180 ESYT3A0FGR9 886 aa21.06■□□□□ 0.96
PDLIM5-205ENST00000380180 RPL7AP62424 266 aaKnown RBP21.06■□□□□ 0.96
PDLIM5-205ENST00000380180 MRPS6P82932 125 aaKnown RBP21.06■□□□□ 0.96
PDLIM5-205ENST00000380180 INCA1Q0VD86 236 aa21.06■□□□□ 0.96
PDLIM5-205ENST00000380180 FAM228AQ86W67 206 aa21.06■□□□□ 0.96
PDLIM5-205ENST00000380180 CAPNS2Q96L46 248 aa21.06■□□□□ 0.96
PDLIM5-205ENST00000380180 SLITRK6Q9H5Y7 841 aa21.06■□□□□ 0.96
PDLIM5-205ENST00000380180 ERVK-5Q9HDB9 667 aa21.06■□□□□ 0.96
PDLIM5-205ENST00000380180 AMACRQ9UHK6 382 aa21.06■□□□□ 0.96
PDLIM5-205ENST00000380180 TCRBV5S1A1TA0A578 114 aa21.05■□□□□ 0.96
PDLIM5-205ENST00000380180 TOMM70O94826 608 aa21.05■□□□□ 0.96
PDLIM5-205ENST00000380180 TNNT3P45378 269 aaPredicted RBP21.05■□□□□ 0.96
PDLIM5-205ENST00000380180 CARSP49589 748 aaKnown RBP21.05■□□□□ 0.96
PDLIM5-205ENST00000380180 NDST1P52848 882 aa21.05■□□□□ 0.96
PDLIM5-205ENST00000380180 FAM47CQ5HY64 1035 aa21.05■□□□□ 0.96
PDLIM5-205ENST00000380180 DAB2IPQ5VWQ8 1189 aa21.05■□□□□ 0.96
PDLIM5-205ENST00000380180 HEXIM2Q96MH2 286 aaKnown RBP21.05■□□□□ 0.96
PDLIM5-205ENST00000380180 PARP2Q9UGN5 583 aa21.05■□□□□ 0.96
PDLIM5-205ENST00000380180 CYTH4Q9UIA0 394 aa21.05■□□□□ 0.96
PDLIM5-205ENST00000380180 CDY2AQ9Y6F7 541 aa21.05■□□□□ 0.96
PDLIM5-205ENST00000380180 SMIM28A0A1B0GU29 152 aa21.05■□□□□ 0.96
PDLIM5-205ENST00000380180 MYCNP04198 464 aaPredicted RBP21.05■□□□□ 0.96
PDLIM5-205ENST00000380180 ASGR1P07306 291 aa21.05■□□□□ 0.96
PDLIM5-205ENST00000380180 PRKAR2AP13861 404 aaKnown RBP21.05■□□□□ 0.96
PDLIM5-205ENST00000380180 TRADDQ15628 312 aa21.05■□□□□ 0.96
PDLIM5-205ENST00000380180 CCDC26Q8TAB7 109 aa21.05■□□□□ 0.96
PDLIM5-205ENST00000380180 CASKIN2Q8WXE0 1202 aa21.05■□□□□ 0.96
PDLIM5-205ENST00000380180 IFT81Q8WYA0 676 aa21.05■□□□□ 0.96
PDLIM5-205ENST00000380180 WNT8BQ93098 351 aa21.05■□□□□ 0.96
PDLIM5-205ENST00000380180 FAM124BQ9H5Z6 455 aaPredicted RBP21.05■□□□□ 0.96
PDLIM5-205ENST00000380180 IPPQ9Y573 584 aa21.05■□□□□ 0.96
PDLIM5-205ENST00000380180 GOLGA6L10A0A0M3HER8 536 aa21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 A0A0U1RQG5 324 aaPredicted RBP21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 M0QZ92 97 aa21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 VDRP11473 427 aa21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 KCNA10Q16322 511 aa21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 CYP4A22Q5TCH4 519 aa21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 C9orf57Q5W0N0 161 aa21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 MAATS1Q7Z4T9 603 aa21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 SMG8Q8ND04 991 aaKnown RBP21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 UBQLN1Q9UMX0 589 aaKnown RBP21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 SNX9Q9Y5X1 595 aa21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 TMEM191CA6NGB0 347 aa21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 EPHB4P54760 987 aa21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 PTPN20Q4JDL3 420 aa21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 XKR4Q5GH76 650 aa21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 TWF2Q6IBS0 349 aaKnown RBP21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 DNAJC24Q6P3W2 148 aa21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 RSPH3Q86UC2 560 aa21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 ZDHHC14Q8IZN3 488 aa21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 TTC39CQ8N584 583 aa21.04■□□□□ 0.96
PDLIM5-205ENST00000380180 LRRC52Q8N7C0 313 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms