RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 ZNF410Q86VK4 478 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 OR7G1Q8NGA0 311 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 FBXO25Q8TCJ0 367 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 CYTH2Q99418 400 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 CTRCQ99895 268 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 SAR1AQ9NR31 198 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 NYAP2Q9P242 653 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 POLLQ9UGP5 575 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 V9GY48 417 aaPredicted RBP7.87□□□□□ -1.15
CDKL5-201ENST00000379989 ATAD5Q96QE3 1844 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 C6orf229H3BNL8 230 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 M0R2N6 131 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 SNAP23O00161 211 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 DNAJC6O75061 913 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 CDH2P19022 906 aaPredicted RBP7.87□□□□□ -1.15
CDKL5-201ENST00000379989 POLR2EP19388 210 aaKnown RBP7.87□□□□□ -1.15
CDKL5-201ENST00000379989 MTIF2P46199 727 aaKnown RBP7.87□□□□□ -1.15
CDKL5-201ENST00000379989 PLTPP55058 493 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 BTKQ06187 659 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 PTPROQ16827 1216 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 LONRF1Q17RB8 773 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 CNNM4Q6P4Q7 775 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 CLNKQ7Z7G1 428 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 SCYL3Q8IZE3 742 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 LZTR1Q8N653 840 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 METTL13Q8N6R0 699 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 ZNF280CQ8ND82 737 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 OXER1Q8TDS5 423 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 MCUR1Q96AQ8 359 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 TRIM47Q96LD4 638 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 TTC1Q99614 292 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 RPAP3Q9H6T3 665 aaPredicted RBP7.87□□□□□ -1.15
CDKL5-201ENST00000379989 MAN1C1Q9NR34 630 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 GID8Q9NWU2 228 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 GIN1Q9NXP7 522 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 KLHL3Q9UH77 587 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 ZBTB21Q9ULJ3 1066 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 PHTF1Q9UMS5 762 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 DAGLAQ9Y4D2 1042 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 MAD1L1Q9Y6D9 718 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 KLRF2D3W0D1 207 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 H3BSA7 217 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 ARHGAP33O14559 1287 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 GYG2O15488 501 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 RIPK2O43353 540 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 TTLL1O95922 423 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 EEF2P13639 858 aaKnown RBP7.87□□□□□ -1.15
CDKL5-201ENST00000379989 AP3M2P53677 418 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 KCNC4Q03721 635 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 SEPT6Q14141 434 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 EXOC3L4Q17RC7 722 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 HGSNATQ68CP4 663 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 BORAQ6PGQ7 559 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 POTEHQ6S545 545 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 ISLR2Q6UXK2 745 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 NLRP9Q7RTR0 991 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 ERI1Q8IV48 349 aaKnown RBP7.87□□□□□ -1.15
CDKL5-201ENST00000379989 CENPSQ8N2Z9 138 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 SRBD1Q8N5C6 995 aaKnown RBP7.87□□□□□ -1.15
CDKL5-201ENST00000379989 MORC4Q8TE76 937 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 SPOCK2Q92563 424 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 EME1Q96AY2 570 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 EFHD2Q96C19 240 aaPredicted RBP7.87□□□□□ -1.15
CDKL5-201ENST00000379989 PTCD3Q96EY7 689 aaKnown RBP7.87□□□□□ -1.15
CDKL5-201ENST00000379989 OSBPL6Q9BZF3 934 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 ZFYVE28Q9HCC9 887 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 FAM207AQ9NSI2 230 aaPredicted RBP7.87□□□□□ -1.15
CDKL5-201ENST00000379989 MAD2L2Q9UI95 211 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 VPS51Q9UID3 782 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 MOSPD1Q9UJG1 213 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 PPM1HQ9ULR3 514 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 AK5Q9Y6K8 562 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 SLC30A1Q9Y6M5 507 aa7.87□□□□□ -1.15
CDKL5-201ENST00000379989 CCDC194A0A1B0GVG4 234 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 G3V3G9 751 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 KMOO15229 486 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 AQP9O43315 295 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 S100BP04271 92 aaPredicted RBP7.86□□□□□ -1.15
CDKL5-201ENST00000379989 ESRRAP11474 423 aaPredicted RBP7.86□□□□□ -1.15
CDKL5-201ENST00000379989 KLRK1P26718 216 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 UBA7P41226 1012 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 AQP4P55087 323 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 AMPD3Q01432 767 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 NR5A1Q13285 461 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 PDE1CQ14123 709 aaPredicted RBP7.86□□□□□ -1.15
CDKL5-201ENST00000379989 DCAF8Q5TAQ9 597 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 NIPAL1Q6NVV3 410 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 DCLRE1AQ6PJP8 1040 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 PAOXQ6QHF9 649 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 RRAGAQ7L523 313 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 TXNRD3Q86VQ6 643 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 SLC38A6Q8IZM9 456 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 PROM2Q8N271 834 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.86□□□□□ -1.15
CDKL5-201ENST00000379989 MTMR14Q8NCE2 650 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 PIP4K2CQ8TBX8 421 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 TGFBRAP1Q8WUH2 860 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 LIN28AQ9H9Z2 209 aaKnown RBP7.86□□□□□ -1.15
CDKL5-201ENST00000379989 PARVGQ9HBI0 331 aa7.86□□□□□ -1.15
CDKL5-201ENST00000379989 SLCO1B3Q9NPD5 702 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms