RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 LIMCH1Q9UPQ0 1083 aa19.31■□□□□ 0.68
PDLIM4-202ENST00000379018 TTC26A0AVF1 554 aa19.3■□□□□ 0.68
PDLIM4-202ENST00000379018 TULP1O00294 542 aaPredicted RBP19.3■□□□□ 0.68
PDLIM4-202ENST00000379018 XPOTO43592 962 aaKnown RBP19.3■□□□□ 0.68
PDLIM4-202ENST00000379018 RPP40O75818 363 aaKnown RBP19.3■□□□□ 0.68
PDLIM4-202ENST00000379018 ODC1P11926 461 aa19.3■□□□□ 0.68
PDLIM4-202ENST00000379018 GUCY2CP25092 1073 aa19.3■□□□□ 0.68
PDLIM4-202ENST00000379018 LIG4P49917 911 aa19.3■□□□□ 0.68
PDLIM4-202ENST00000379018 CCINQ13939 588 aa19.3■□□□□ 0.68
PDLIM4-202ENST00000379018 VEPH1Q14D04 833 aa19.3■□□□□ 0.68
PDLIM4-202ENST00000379018 SLC39A12Q504Y0 691 aa19.3■□□□□ 0.68
PDLIM4-202ENST00000379018 ZPBP2Q6X784 338 aa19.3■□□□□ 0.68
PDLIM4-202ENST00000379018 DTHD1Q6ZMT9 781 aa19.3■□□□□ 0.68
PDLIM4-202ENST00000379018 GIPC2Q8TF65 315 aa19.3■□□□□ 0.68
PDLIM4-202ENST00000379018 SPIRE2Q8WWL2 714 aa19.3■□□□□ 0.68
PDLIM4-202ENST00000379018 SENP8Q96LD8 212 aa19.3■□□□□ 0.68
PDLIM4-202ENST00000379018 TIPINQ9BVW5 301 aa19.3■□□□□ 0.68
PDLIM4-202ENST00000379018 OXCT2Q9BYC2 517 aaPredicted RBP19.3■□□□□ 0.68
PDLIM4-202ENST00000379018 RPF1Q9H9Y2 349 aaKnown RBP19.3■□□□□ 0.68
PDLIM4-202ENST00000379018 PLEKHA5Q9HAU0 1116 aa19.3■□□□□ 0.68
PDLIM4-202ENST00000379018 RXFP3Q9NSD7 469 aa19.3■□□□□ 0.68
PDLIM4-202ENST00000379018 ASB3Q9Y575 518 aa19.3■□□□□ 0.68
PDLIM4-202ENST00000379018 ZNF638Q14966 1978 aaKnown RBP19.3■□□□□ 0.68
PDLIM4-202ENST00000379018 TYMPP19971 482 aa19.29■□□□□ 0.68
PDLIM4-202ENST00000379018 AARSP49588 968 aaKnown RBP eCLIP19.29■□□□□ 0.68
PDLIM4-202ENST00000379018 MYBPC2Q14324 1141 aa19.29■□□□□ 0.68
PDLIM4-202ENST00000379018 ENOX2Q16206 610 aaKnown RBP19.29■□□□□ 0.68
PDLIM4-202ENST00000379018 ITPRIPL2Q3MIP1 535 aa19.29■□□□□ 0.68
PDLIM4-202ENST00000379018 N4BP2L1Q5TBK1 243 aaPredicted RBP19.29■□□□□ 0.68
PDLIM4-202ENST00000379018 KBTBD6Q86V97 674 aa19.29■□□□□ 0.68
PDLIM4-202ENST00000379018 TTC16Q8NEE8 873 aa19.29■□□□□ 0.68
PDLIM4-202ENST00000379018 OR10T2Q8NGX3 314 aa19.29■□□□□ 0.68
PDLIM4-202ENST00000379018 DDX1Q92499 740 aaKnown RBP19.29■□□□□ 0.68
PDLIM4-202ENST00000379018 CDK5RAP3Q96JB5 506 aa19.29■□□□□ 0.68
PDLIM4-202ENST00000379018 LLPHQ9BRT6 129 aaKnown RBP19.29■□□□□ 0.68
PDLIM4-202ENST00000379018 POLR3BQ9NW08 1133 aaPredicted RBP19.29■□□□□ 0.68
PDLIM4-202ENST00000379018 THG1LQ9NWX6 298 aaKnown RBP19.29■□□□□ 0.68
PDLIM4-202ENST00000379018 ANGPTL2Q9UKU9 493 aa19.29■□□□□ 0.68
PDLIM4-202ENST00000379018 TSC2P49815 1807 aa19.29■□□□□ 0.68
PDLIM4-202ENST00000379018 USP24Q9UPU5 2620 aa19.29■□□□□ 0.68
PDLIM4-202ENST00000379018 CACNA1GO43497 2377 aa19.28■□□□□ 0.68
PDLIM4-202ENST00000379018 HNRNPDLO14979 420 aaKnown RBP19.28■□□□□ 0.68
PDLIM4-202ENST00000379018 FGF19O95750 216 aa19.28■□□□□ 0.68
PDLIM4-202ENST00000379018 CYP3A5P20815 502 aa19.28■□□□□ 0.68
PDLIM4-202ENST00000379018 MCM2P49736 904 aa19.28■□□□□ 0.68
PDLIM4-202ENST00000379018 HMGN5P82970 282 aaKnown RBP19.28■□□□□ 0.68
PDLIM4-202ENST00000379018 PLCB2Q00722 1185 aa19.28■□□□□ 0.68
PDLIM4-202ENST00000379018 ZBTB6Q15916 424 aa19.28■□□□□ 0.68
PDLIM4-202ENST00000379018 TRIM68Q6AZZ1 485 aa19.28■□□□□ 0.68
PDLIM4-202ENST00000379018 JADE1Q6IE81 842 aa19.28■□□□□ 0.68
PDLIM4-202ENST00000379018 GAB3Q8WWW8 586 aa19.28■□□□□ 0.68
PDLIM4-202ENST00000379018 PNMA5Q96PV4 448 aa19.28■□□□□ 0.68
PDLIM4-202ENST00000379018 NTPCRQ9BSD7 190 aaKnown RBP19.28■□□□□ 0.68
PDLIM4-202ENST00000379018 TASP1Q9H6P5 420 aa19.28■□□□□ 0.68
PDLIM4-202ENST00000379018 OBP2AQ9NY56 170 aa19.28■□□□□ 0.68
PDLIM4-202ENST00000379018 RALYQ9UKM9 306 aaKnown RBP19.28■□□□□ 0.68
PDLIM4-202ENST00000379018 SLC8A2Q9UPR5 921 aa19.28■□□□□ 0.68
PDLIM4-202ENST00000379018 K7ENM7 598 aa19.27■□□□□ 0.68
PDLIM4-202ENST00000379018 FOXD2O60548 495 aaPredicted RBP19.27■□□□□ 0.68
PDLIM4-202ENST00000379018 NFICP08651 508 aa19.27■□□□□ 0.68
PDLIM4-202ENST00000379018 PLA2G4BP0C869 781 aa19.27■□□□□ 0.68
PDLIM4-202ENST00000379018 ATF6P18850 670 aa19.27■□□□□ 0.68
PDLIM4-202ENST00000379018 CDC25CP30307 473 aa19.27■□□□□ 0.68
PDLIM4-202ENST00000379018 NMT1P30419 496 aaKnown RBP19.27■□□□□ 0.68
PDLIM4-202ENST00000379018 LILRA4P59901 499 aa19.27■□□□□ 0.68
PDLIM4-202ENST00000379018 DHX8Q14562 1220 aaKnown RBP19.27■□□□□ 0.68
PDLIM4-202ENST00000379018 MCTP1Q6DN14 999 aa19.27■□□□□ 0.68
PDLIM4-202ENST00000379018 CACNA2D4Q7Z3S7 1137 aa19.27■□□□□ 0.68
PDLIM4-202ENST00000379018 STKLD1Q8NE28 680 aa19.27■□□□□ 0.68
PDLIM4-202ENST00000379018 MSTO1Q9BUK6 570 aa19.27■□□□□ 0.68
PDLIM4-202ENST00000379018 EBF3Q9H4W6 596 aa19.27■□□□□ 0.68
PDLIM4-202ENST00000379018 GKN1Q9NS71 199 aa19.27■□□□□ 0.68
PDLIM4-202ENST00000379018 TCHHQ07283 1943 aa19.27■□□□□ 0.67
PDLIM4-202ENST00000379018 CFAP47Q6ZTR5 3102 aa19.26■□□□□ 0.67
PDLIM4-202ENST00000379018 SCN1AP35498 2009 aa19.26■□□□□ 0.67
PDLIM4-202ENST00000379018 EPN2O95208 641 aa19.26■□□□□ 0.67
PDLIM4-202ENST00000379018 U2AF2P26368 475 aaKnown RBP eCLIP19.26■□□□□ 0.67
PDLIM4-202ENST00000379018 GRSF1Q12849 480 aaKnown RBP eCLIP19.26■□□□□ 0.67
PDLIM4-202ENST00000379018 STPG1Q5TH74 334 aa19.26■□□□□ 0.67
PDLIM4-202ENST00000379018 C9orf57Q5W0N0 161 aa19.26■□□□□ 0.67
PDLIM4-202ENST00000379018 FSTL4Q6MZW2 842 aa19.26■□□□□ 0.67
PDLIM4-202ENST00000379018 SYNPOQ8N3V7 929 aa19.26■□□□□ 0.67
PDLIM4-202ENST00000379018 MAB21L3Q8N8X9 362 aa19.26■□□□□ 0.67
PDLIM4-202ENST00000379018 SYT2Q8N9I0 419 aaPredicted RBP19.26■□□□□ 0.67
PDLIM4-202ENST00000379018 HHIPQ96QV1 700 aa19.26■□□□□ 0.67
PDLIM4-202ENST00000379018 SLC46A2Q9BY10 475 aa19.26■□□□□ 0.67
PDLIM4-202ENST00000379018 ZHX3Q9H4I2 956 aa19.26■□□□□ 0.67
PDLIM4-202ENST00000379018 ABI2Q9NYB9 513 aaPredicted RBP19.26■□□□□ 0.67
PDLIM4-202ENST00000379018 LARSQ9P2J5 1176 aaKnown RBP19.26■□□□□ 0.67
PDLIM4-202ENST00000379018 KCNG1Q9UIX4 513 aa19.26■□□□□ 0.67
PDLIM4-202ENST00000379018 EML5Q05BV3 1969 aa19.25■□□□□ 0.67
PDLIM4-202ENST00000379018 VWA3AA6NCI4 1184 aa19.25■□□□□ 0.67
PDLIM4-202ENST00000379018 LAD1O00515 517 aa19.25■□□□□ 0.67
PDLIM4-202ENST00000379018 OGTO15294 1046 aa19.25■□□□□ 0.67
PDLIM4-202ENST00000379018 ZNF806P0C7X5 589 aa19.25■□□□□ 0.67
PDLIM4-202ENST00000379018 AVPR1AP37288 418 aa19.25■□□□□ 0.67
PDLIM4-202ENST00000379018 PRPHP41219 470 aa19.25■□□□□ 0.67
PDLIM4-202ENST00000379018 TUFMP49411 452 aaKnown RBP19.25■□□□□ 0.67
PDLIM4-202ENST00000379018 SLC12A3P55017 1021 aa19.25■□□□□ 0.67
PDLIM4-202ENST00000379018 NCKAP1LP55160 1127 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms