RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 RELL1Q8IUW5 271 aa20.65■□□□□ 0.9
SHROOM1-202ENST00000378676 TMEM134Q9H6X4 195 aa20.65■□□□□ 0.9
SHROOM1-202ENST00000378676 ADCY3O60266 1144 aa20.64■□□□□ 0.89
SHROOM1-202ENST00000378676 GSTA1P08263 222 aa20.64■□□□□ 0.89
SHROOM1-202ENST00000378676 MAGEA4P43358 317 aa20.64■□□□□ 0.89
SHROOM1-202ENST00000378676 MYL6P60660 151 aa20.64■□□□□ 0.89
SHROOM1-202ENST00000378676 ZKSCAN8Q15776 578 aaPredicted RBP20.64■□□□□ 0.89
SHROOM1-202ENST00000378676 ZFYVE27Q5T4F4 411 aa20.64■□□□□ 0.89
SHROOM1-202ENST00000378676 NUGGCQ68CJ6 796 aa20.64■□□□□ 0.89
SHROOM1-202ENST00000378676 TPX2Q9ULW0 747 aaKnown RBP20.64■□□□□ 0.89
SHROOM1-202ENST00000378676 AGAP1Q9UPQ3 857 aa20.64■□□□□ 0.89
SHROOM1-202ENST00000378676 USP15Q9Y4E8 981 aaPredicted RBP20.64■□□□□ 0.89
SHROOM1-202ENST00000378676 DNALI1O14645 258 aaPredicted RBP20.64■□□□□ 0.89
SHROOM1-202ENST00000378676 CDH16O75309 829 aa20.64■□□□□ 0.89
SHROOM1-202ENST00000378676 HAUS1Q96CS2 278 aa20.64■□□□□ 0.89
SHROOM1-202ENST00000378676 RBM41Q96IZ5 413 aaKnown RBP20.64■□□□□ 0.89
SHROOM1-202ENST00000378676 SAYSD1Q9NPB0 183 aa20.64■□□□□ 0.89
SHROOM1-202ENST00000378676 FARP2O94887 1054 aaPredicted RBP20.63■□□□□ 0.89
SHROOM1-202ENST00000378676 UBOX5O94941 541 aa20.63■□□□□ 0.89
SHROOM1-202ENST00000378676 GCAP28676 217 aa20.63■□□□□ 0.89
SHROOM1-202ENST00000378676 ALDH5A1P51649 535 aaPredicted RBP20.63■□□□□ 0.89
SHROOM1-202ENST00000378676 FASTKD3Q14CZ7 662 aaKnown RBP20.63■□□□□ 0.89
SHROOM1-202ENST00000378676 TMED2Q15363 201 aa20.63■□□□□ 0.89
SHROOM1-202ENST00000378676 CGB2Q6NT52 195 aa20.63■□□□□ 0.89
SHROOM1-202ENST00000378676 DNAJC24Q6P3W2 148 aa20.63■□□□□ 0.89
SHROOM1-202ENST00000378676 SPOCD1Q6ZMY3 1216 aa20.63■□□□□ 0.89
SHROOM1-202ENST00000378676 RCOR2Q8IZ40 523 aa20.63■□□□□ 0.89
SHROOM1-202ENST00000378676 IMPG2Q9BZV3 1241 aa20.63■□□□□ 0.89
SHROOM1-202ENST00000378676 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.63■□□□□ 0.89
SHROOM1-202ENST00000378676 RFC5P40937 340 aa20.63■□□□□ 0.89
SHROOM1-202ENST00000378676 STAT4Q14765 748 aa20.63■□□□□ 0.89
SHROOM1-202ENST00000378676 EAPPQ56P03 285 aaPredicted RBP20.63■□□□□ 0.89
SHROOM1-202ENST00000378676 SCARA5Q6ZMJ2 495 aa20.63■□□□□ 0.89
SHROOM1-202ENST00000378676 ZNF148Q9UQR1 794 aa20.63■□□□□ 0.89
SHROOM1-202ENST00000378676 CHUKO15111 745 aa20.62■□□□□ 0.89
SHROOM1-202ENST00000378676 ELF3P78545 371 aaPredicted RBP20.62■□□□□ 0.89
SHROOM1-202ENST00000378676 SNCBQ16143 134 aa20.62■□□□□ 0.89
SHROOM1-202ENST00000378676 HP1BP3Q5SSJ5 553 aaPredicted RBP20.62■□□□□ 0.89
SHROOM1-202ENST00000378676 CYP4A22Q5TCH4 519 aa20.62■□□□□ 0.89
SHROOM1-202ENST00000378676 PPP1R2P3Q6NXS1 205 aa20.62■□□□□ 0.89
SHROOM1-202ENST00000378676 WDR49Q8IV35 697 aa20.62■□□□□ 0.89
SHROOM1-202ENST00000378676 ANKRD35Q8N283 1001 aa20.62■□□□□ 0.89
SHROOM1-202ENST00000378676 WDTC1Q8N5D0 677 aa20.62■□□□□ 0.89
SHROOM1-202ENST00000378676 ALLCQ8N6M5 410 aa20.62■□□□□ 0.89
SHROOM1-202ENST00000378676 DNERQ8NFT8 737 aa20.62■□□□□ 0.89
SHROOM1-202ENST00000378676 TFAP2BQ92481 460 aa20.62■□□□□ 0.89
SHROOM1-202ENST00000378676 KLRG1Q96E93 195 aa20.62■□□□□ 0.89
SHROOM1-202ENST00000378676 CISHQ9NSE2 258 aa20.62■□□□□ 0.89
SHROOM1-202ENST00000378676 AFG3L2Q9Y4W6 797 aa20.62■□□□□ 0.89
SHROOM1-202ENST00000378676 hCG_1818297A0A087WSY0 165 aa20.61■□□□□ 0.89
SHROOM1-202ENST00000378676 MSCO60682 206 aa20.61■□□□□ 0.89
SHROOM1-202ENST00000378676 CALB1P05937 261 aa20.61■□□□□ 0.89
SHROOM1-202ENST00000378676 PECAM1P16284 738 aaPredicted RBP20.61■□□□□ 0.89
SHROOM1-202ENST00000378676 PSMC4P43686 418 aa20.61■□□□□ 0.89
SHROOM1-202ENST00000378676 PSEN1P49768 467 aa20.61■□□□□ 0.89
SHROOM1-202ENST00000378676 ARSEP51690 589 aa20.61■□□□□ 0.89
SHROOM1-202ENST00000378676 PPP1R15BQ5SWA1 713 aa20.61■□□□□ 0.89
SHROOM1-202ENST00000378676 GPAT2Q6NUI2 795 aa20.61■□□□□ 0.89
SHROOM1-202ENST00000378676 PRPF31Q8WWY3 499 aaKnown RBP20.61■□□□□ 0.89
SHROOM1-202ENST00000378676 TGS1Q96RS0 853 aaKnown RBP20.61■□□□□ 0.89
SHROOM1-202ENST00000378676 ABHD2P08910 425 aa20.61■□□□□ 0.89
SHROOM1-202ENST00000378676 STX2P32856 288 aa20.61■□□□□ 0.89
SHROOM1-202ENST00000378676 MAML1Q92585 1016 aa20.61■□□□□ 0.89
SHROOM1-202ENST00000378676 MGRN1O60291 552 aa20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 TJP3O95049 919 aa20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 ITGBL1O95965 494 aaPredicted RBP20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 CETN2P41208 172 aa20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 MCL1Q07820 350 aa20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 GPS1Q13098 491 aa20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 PRKG1Q13976 671 aa20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 DRICH1Q6PGQ1 229 aaPredicted RBP20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 DCUN1D2Q6PH85 259 aa20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 ZPBP2Q6X784 338 aa20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 CCDC63Q8NA47 563 aa20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 NIF3L1Q9GZT8 377 aa20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 HOXC10Q9NYD6 342 aa20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 LSM8O95777 96 aaKnown RBP20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 WEE2P0C1S8 567 aa20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 FOXN2P32314 431 aa20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 STAT5BP51692 787 aa20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 LMNB2Q03252 620 aa20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 OASLQ15646 514 aaKnown RBP20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 SPATA21Q7Z572 469 aa20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 TRPM4Q8TD43 1214 aa20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 CCDC77Q9BR77 488 aa20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 TCHPQ9BT92 498 aa20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 MCM3APO60318 1980 aa20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 OTOFQ9HC10 1997 aa20.6■□□□□ 0.89
SHROOM1-202ENST00000378676 EXOC1LA0A1B0GW35 172 aa20.59■□□□□ 0.89
SHROOM1-202ENST00000378676 LRRD1A4D1F6 860 aa20.59■□□□□ 0.89
SHROOM1-202ENST00000378676 RASA4BC9J798 803 aa20.59■□□□□ 0.89
SHROOM1-202ENST00000378676 ABLIM1O14639 778 aa20.59■□□□□ 0.89
SHROOM1-202ENST00000378676 RASA4O43374 803 aa20.59■□□□□ 0.89
SHROOM1-202ENST00000378676 MAFO75444 373 aaPredicted RBP20.59■□□□□ 0.89
SHROOM1-202ENST00000378676 NCALDP61601 193 aa20.59■□□□□ 0.89
SHROOM1-202ENST00000378676 WDR72Q3MJ13 1102 aa20.59■□□□□ 0.89
SHROOM1-202ENST00000378676 TREML2Q5T2D2 321 aa20.59■□□□□ 0.89
SHROOM1-202ENST00000378676 LRRC38Q5VT99 294 aa20.59■□□□□ 0.89
SHROOM1-202ENST00000378676 CAPN12Q6ZSI9 719 aa20.59■□□□□ 0.89
SHROOM1-202ENST00000378676 RPAINQ86UA6 219 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms