RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 OR6P1Q8NGX9 317 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 ZNF606Q8WXB4 792 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 VPS39Q96JC1 886 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 OSMRQ99650 979 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 PABPC3Q9H361 631 aaKnown RBP13.86□□□□□ -0.19
NPHP4-203ENST00000378169 ZFATQ9P243 1243 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 PIK3CDO00329 1044 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 IRF6O14896 467 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 GAS2O43903 313 aaKnown RBP13.86□□□□□ -0.19
NPHP4-203ENST00000378169 FAM153BP0C7A2 387 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 POU5F1BQ06416 359 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 FAM153CQ494X1 144 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 NOTUMQ6P988 496 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 MOB2Q70IA6 237 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 CCNYL1Q8N7R7 359 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 DNERQ8NFT8 737 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 USP33Q8TEY7 942 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 ZC3H7BQ9UGR2 993 aaKnown RBP13.86□□□□□ -0.19
NPHP4-203ENST00000378169 FAM153AQ9UHL3 310 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 CPA4Q9UI42 421 aa13.86□□□□□ -0.19
NPHP4-203ENST00000378169 DFFAO00273 331 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 GPD1P21695 349 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 GNL1P36915 607 aaPredicted RBP13.85□□□□□ -0.19
NPHP4-203ENST00000378169 TPI1P60174 286 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 LRIG3Q6UXM1 1119 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 SYDE1Q6ZW31 735 aaPredicted RBP13.85□□□□□ -0.19
NPHP4-203ENST00000378169 NUDCD3Q8IVD9 361 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 SAMD3Q8N6K7 520 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 XPO6Q96QU8 1125 aaKnown RBP13.85□□□□□ -0.19
NPHP4-203ENST00000378169 DNAJC18Q9H819 358 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 SETD4Q9NVD3 440 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 STILQ15468 1287 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 TMEM139Q8IV31 216 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 EPS8L3Q8TE67 593 aaKnown RBP13.85□□□□□ -0.19
NPHP4-203ENST00000378169 LBHD1Q9BQE6 289 aaPredicted RBP13.85□□□□□ -0.19
NPHP4-203ENST00000378169 MROH8Q9H579 483 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 KIF9Q9HAQ2 790 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 GPATCH2LQ9NWQ4 482 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 REXO2Q9Y3B8 237 aaKnown RBP13.85□□□□□ -0.19
NPHP4-203ENST00000378169 PYGMP11217 842 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 TAF1BQ53T94 588 aaPredicted RBP13.85□□□□□ -0.19
NPHP4-203ENST00000378169 NIPA1Q7RTP0 329 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 KRT35Q92764 455 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 KCTD10Q9H3F6 313 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 CFAP69A5D8W1 941 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 TGFB1I1O43294 461 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 ZC3H11AO75152 810 aaKnown RBP eCLIP13.85□□□□□ -0.19
NPHP4-203ENST00000378169 DCTN3O75935 186 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 FNTAP49354 379 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 ERVK-9P63128 1117 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 ACTN3Q08043 901 aaPredicted RBP13.85□□□□□ -0.19
NPHP4-203ENST00000378169 BTNL9Q6UXG8 535 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 SRLQ86TD4 932 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 RNF135Q8IUD6 432 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 MAP4K3Q8IVH8 894 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 COPS5Q92905 334 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 NUF2Q9BZD4 464 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 RSAD1Q9HA92 442 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 FGFR1OP2Q9NVK5 253 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 ZNF446Q9NWS9 450 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 CYP39A1Q9NYL5 469 aa13.85□□□□□ -0.19
NPHP4-203ENST00000378169 BCL9LQ86UU0 1499 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 GYG2O15488 501 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 TGFB3P10600 412 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 GRIK1P39086 918 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 DEUP1Q05D60 604 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 NT5DC3Q86UY8 548 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 TMEM121Q9BTD3 319 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 HSD3B7Q9H2F3 369 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 VCXQ9H320 206 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 SEMA4AQ9H3S1 761 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.84□□□□□ -0.194e-6■■■■■ 28.1
NPHP4-203ENST00000378169 RAB21Q9UL25 225 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 XRN1Q8IZH2 1706 aaKnown RBP13.84□□□□□ -0.19
NPHP4-203ENST00000378169 E2F8A0AVK6 867 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 MEFVO15553 781 aaPredicted RBP13.84□□□□□ -0.19
NPHP4-203ENST00000378169 ADRB2P07550 413 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 UBA1P22314 1058 aaKnown RBP13.84□□□□□ -0.19
NPHP4-203ENST00000378169 PBX1P40424 430 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 ITGB3BPQ13352 177 aaPredicted RBP13.84□□□□□ -0.19
NPHP4-203ENST00000378169 AADACL2Q6P093 401 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 SLC7A14Q8TBB6 771 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 MARCOQ9UEW3 520 aaPredicted RBP13.84□□□□□ -0.19
NPHP4-203ENST00000378169 ZFP69BQ9UJL9 534 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 A0A0A6YYK5 440 aaPredicted RBP13.84□□□□□ -0.19
NPHP4-203ENST00000378169 ADCY3O60266 1144 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 B3GAT3O94766 335 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 PROSCO94903 275 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 CD4P01730 458 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 ZFXP17010 805 aaPredicted RBP13.84□□□□□ -0.19
NPHP4-203ENST00000378169 NUMBP49757 651 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 ARFIP2P53365 341 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 PLCB4Q15147 1175 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 RBBP5Q15291 538 aaKnown RBP13.84□□□□□ -0.19
NPHP4-203ENST00000378169 UGCGQ16739 394 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 JADE1Q6IE81 842 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 SPATA24Q86W54 205 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 ABRAQ8N0Z2 381 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 RAPGEF5Q92565 580 aa13.84□□□□□ -0.19
NPHP4-203ENST00000378169 MED15Q96RN5 788 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms