RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 C9orf72Q96LT7 481 aa17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 DENND2DQ9H6A0 471 aaPredicted RBP17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 AVENQ9NQS1 362 aaPredicted RBP17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 ZNF277Q9NRM2 450 aaPredicted RBP17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 TELO2Q9Y4R8 837 aa17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 PCDHB2Q9Y5E7 798 aa17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 PCDHA10Q9Y5I2 948 aa17.55■□□□□ 0.4
PCDHA1-201ENST00000378133 GSTTP1A0A1W2PQM5 241 aa17.54■□□□□ 0.4
PCDHA1-201ENST00000378133 CBX6O95503 412 aa17.54■□□□□ 0.4
PCDHA1-201ENST00000378133 ASMTLO95671 621 aa17.54■□□□□ 0.4
PCDHA1-201ENST00000378133 SLC1A1P43005 524 aa17.54■□□□□ 0.4
PCDHA1-201ENST00000378133 NSFP46459 744 aaKnown RBP17.54■□□□□ 0.4
PCDHA1-201ENST00000378133 SP4Q02446 784 aa17.54■□□□□ 0.4
PCDHA1-201ENST00000378133 R3HDM1Q15032 1099 aaKnown RBP17.54■□□□□ 0.4
PCDHA1-201ENST00000378133 SPOPLQ6IQ16 392 aa17.54■□□□□ 0.4
PCDHA1-201ENST00000378133 ENOSF1Q7L5Y1 443 aa17.54■□□□□ 0.4
PCDHA1-201ENST00000378133 PASD1Q8IV76 773 aa17.54■□□□□ 0.4
PCDHA1-201ENST00000378133 SPIRE2Q8WWL2 714 aa17.54■□□□□ 0.4
PCDHA1-201ENST00000378133 ROR2Q01974 943 aaKnown RBP17.54■□□□□ 0.4
PCDHA1-201ENST00000378133 LMNB2Q03252 620 aa17.54■□□□□ 0.4
PCDHA1-201ENST00000378133 SYDE1Q6ZW31 735 aaPredicted RBP17.54■□□□□ 0.4
PCDHA1-201ENST00000378133 NLRX1Q86UT6 975 aa17.54■□□□□ 0.4
PCDHA1-201ENST00000378133 FAM83AQ86UY5 434 aa17.54■□□□□ 0.4
PCDHA1-201ENST00000378133 FAM81BQ96LP2 452 aa17.54■□□□□ 0.4
PCDHA1-201ENST00000378133 DCLRE1BQ9H816 532 aa17.54■□□□□ 0.4
PCDHA1-201ENST00000378133 PGAP2Q9UHJ9 254 aa17.54■□□□□ 0.4
PCDHA1-201ENST00000378133 CTDP1Q9Y5B0 961 aaPredicted RBP17.54■□□□□ 0.4
PCDHA1-201ENST00000378133 TNNI1P19237 187 aa17.53■□□□□ 0.4
PCDHA1-201ENST00000378133 MAN1A1P33908 653 aa17.53■□□□□ 0.4
PCDHA1-201ENST00000378133 GJC1P36383 396 aa17.53■□□□□ 0.4
PCDHA1-201ENST00000378133 FKBP1CQ5VVH2 108 aa17.53■□□□□ 0.4
PCDHA1-201ENST00000378133 FAM210AQ96ND0 272 aa17.53■□□□□ 0.4
PCDHA1-201ENST00000378133 C11orf70Q9BRQ4 267 aa17.53■□□□□ 0.4
PCDHA1-201ENST00000378133 PIDD1Q9HB75 910 aa17.53■□□□□ 0.4
PCDHA1-201ENST00000378133 DLGAP2Q9P1A6 1054 aa17.53■□□□□ 0.4
PCDHA1-201ENST00000378133 MAP3K13O43283 966 aa17.53■□□□□ 0.4
PCDHA1-201ENST00000378133 SORBS3O60504 671 aa17.53■□□□□ 0.4
PCDHA1-201ENST00000378133 WNT7BP56706 349 aa17.53■□□□□ 0.4
PCDHA1-201ENST00000378133 TAS2R40P59535 323 aa17.53■□□□□ 0.4
PCDHA1-201ENST00000378133 SPARCL1Q14515 664 aa17.53■□□□□ 0.4
PCDHA1-201ENST00000378133 BRDTQ58F21 947 aaPredicted RBP17.53■□□□□ 0.4
PCDHA1-201ENST00000378133 SWSAP1Q6NVH7 229 aa17.53■□□□□ 0.4
PCDHA1-201ENST00000378133 TAS1R3Q7RTX0 852 aa17.53■□□□□ 0.4
PCDHA1-201ENST00000378133 SAMD3Q8N6K7 520 aa17.53■□□□□ 0.4
PCDHA1-201ENST00000378133 TTLL6Q8N841 843 aa17.53■□□□□ 0.4
PCDHA1-201ENST00000378133 MAML1Q92585 1016 aa17.53■□□□□ 0.4
PCDHA1-201ENST00000378133 USTQ9Y2C2 406 aa17.53■□□□□ 0.4
PCDHA1-201ENST00000378133 C2CD2Q9Y426 696 aa17.53■□□□□ 0.4
PCDHA1-201ENST00000378133 ASB3Q9Y575 518 aa17.53■□□□□ 0.4
PCDHA1-201ENST00000378133 PROSCO94903 275 aa17.52■□□□□ 0.4
PCDHA1-201ENST00000378133 LMNAP02545 664 aaKnown RBP17.52■□□□□ 0.4
PCDHA1-201ENST00000378133 DSG3P32926 999 aa17.52■□□□□ 0.4
PCDHA1-201ENST00000378133 SESN3P58005 492 aa17.52■□□□□ 0.4
PCDHA1-201ENST00000378133 KLF1Q13351 362 aaPredicted RBP17.52■□□□□ 0.4
PCDHA1-201ENST00000378133 WDR44Q5JSH3 913 aa17.52■□□□□ 0.4
PCDHA1-201ENST00000378133 APBB1IPQ7Z5R6 666 aaPredicted RBP17.52■□□□□ 0.4
PCDHA1-201ENST00000378133 SH3TC2Q8TF17 1288 aa17.52■□□□□ 0.4
PCDHA1-201ENST00000378133 UPF1Q92900 1129 aaKnown RBP eCLIP17.52■□□□□ 0.4
PCDHA1-201ENST00000378133 VCXQ9H320 206 aa17.52■□□□□ 0.4
PCDHA1-201ENST00000378133 MAP3K20Q9NYL2 800 aaKnown RBP17.52■□□□□ 0.4
PCDHA1-201ENST00000378133 NVLO15381 856 aaKnown RBP17.52■□□□□ 0.39
PCDHA1-201ENST00000378133 CYP1A1P04798 512 aaPredicted RBP17.52■□□□□ 0.39
PCDHA1-201ENST00000378133 GARTP22102 1010 aa17.52■□□□□ 0.39
PCDHA1-201ENST00000378133 SP100P23497 879 aaPredicted RBP17.52■□□□□ 0.39
PCDHA1-201ENST00000378133 RFC5P40937 340 aa17.52■□□□□ 0.39
PCDHA1-201ENST00000378133 ACOT2P49753 483 aa17.52■□□□□ 0.39
PCDHA1-201ENST00000378133 RPS6KA3P51812 740 aa17.52■□□□□ 0.39
PCDHA1-201ENST00000378133 BAATQ14032 418 aaPredicted RBP17.52■□□□□ 0.39
PCDHA1-201ENST00000378133 TAF1BQ53T94 588 aaPredicted RBP17.52■□□□□ 0.39
PCDHA1-201ENST00000378133 CYP4F22Q6NT55 531 aa17.52■□□□□ 0.39
PCDHA1-201ENST00000378133 C15orf39Q6ZRI6 1047 aa17.52■□□□□ 0.39
PCDHA1-201ENST00000378133 ZNF365Q70YC5 407 aa17.52■□□□□ 0.39
PCDHA1-201ENST00000378133 ANKS1BQ7Z6G8 1248 aa17.52■□□□□ 0.39
PCDHA1-201ENST00000378133 GALNT15Q8N3T1 639 aa17.52■□□□□ 0.39
PCDHA1-201ENST00000378133 LRRC8CQ8TDW0 803 aa17.52■□□□□ 0.39
PCDHA1-201ENST00000378133 LPAR1Q92633 364 aa17.52■□□□□ 0.39
PCDHA1-201ENST00000378133 FNBP1Q96RU3 617 aa17.52■□□□□ 0.39
PCDHA1-201ENST00000378133 C17orf75Q9HAS0 396 aa17.52■□□□□ 0.39
PCDHA1-201ENST00000378133 XPNPEP1Q9NQW7 623 aa17.52■□□□□ 0.39
PCDHA1-201ENST00000378133 NEU2Q9Y3R4 380 aa17.52■□□□□ 0.39
PCDHA1-201ENST00000378133 RIPK3Q9Y572 518 aa17.52■□□□□ 0.39
PCDHA1-201ENST00000378133 UMODL1Q5DID0 1318 aa17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 EDF1O60869 148 aaKnown RBP17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 ZC3H11AO75152 810 aaKnown RBP eCLIP17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 HLA-DRAP01903 254 aa17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 CD58P19256 250 aa17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 MARK3P27448 753 aa17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 MAP3K10Q02779 954 aa17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 CENPCQ03188 943 aa17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 CCDC6Q16204 474 aa17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 MON1BQ7L1V2 547 aa17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 WNK4Q96J92 1243 aa17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 OSBPL8Q9BZF1 889 aa17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 EURLQ9NYK6 297 aa17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 STOML1Q9UBI4 398 aa17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 WNT10BO00744 389 aa17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 TRAFD1O14545 582 aaPredicted RBP17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 STBD1O95210 358 aa17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 PTPN4P29074 926 aa17.51■□□□□ 0.39
PCDHA1-201ENST00000378133 KHDC1Q4VXA5 237 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms