RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 PSTPIP1O43586 416 aa20.39■□□□□ 0.85
PCDHA4-201ENST00000378125 ITGB3P05106 788 aa20.39■□□□□ 0.85
PCDHA4-201ENST00000378125 SURF1Q15526 300 aa20.39■□□□□ 0.85
PCDHA4-201ENST00000378125 ERICH1Q86X53 443 aa20.39■□□□□ 0.85
PCDHA4-201ENST00000378125 C1orf127Q8N9H9 656 aa20.39■□□□□ 0.85
PCDHA4-201ENST00000378125 EPS8L3Q8TE67 593 aaKnown RBP20.39■□□□□ 0.85
PCDHA4-201ENST00000378125 DDX23Q9BUQ8 820 aaKnown RBP20.39■□□□□ 0.85
PCDHA4-201ENST00000378125 HMGXB4Q9UGU5 601 aa20.39■□□□□ 0.85
PCDHA4-201ENST00000378125 IP6K2Q9UHH9 426 aa20.39■□□□□ 0.85
PCDHA4-201ENST00000378125 IVNS1ABPQ9Y6Y0 642 aa20.39■□□□□ 0.85
PCDHA4-201ENST00000378125 ADCY8P40145 1251 aa20.38■□□□□ 0.85
PCDHA4-201ENST00000378125 PPP2R2AP63151 447 aa20.38■□□□□ 0.85
PCDHA4-201ENST00000378125 KLF1Q13351 362 aaPredicted RBP20.38■□□□□ 0.85
PCDHA4-201ENST00000378125 AGBL2Q5U5Z8 902 aa20.38■□□□□ 0.85
PCDHA4-201ENST00000378125 MAMDC4Q6UXC1 1216 aa20.38■□□□□ 0.85
PCDHA4-201ENST00000378125 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.38■□□□□ 0.85
PCDHA4-201ENST00000378125 MDM1Q8TC05 714 aa20.38■□□□□ 0.85
PCDHA4-201ENST00000378125 ZC3H15Q8WU90 426 aaKnown RBP20.38■□□□□ 0.85
PCDHA4-201ENST00000378125 SCLT1Q96NL6 688 aa20.38■□□□□ 0.85
PCDHA4-201ENST00000378125 SDCBP2Q9H190 292 aa20.38■□□□□ 0.85
PCDHA4-201ENST00000378125 SMYD3Q9H7B4 428 aa20.38■□□□□ 0.85
PCDHA4-201ENST00000378125 TNFSF13BQ9Y275 285 aa20.38■□□□□ 0.85
PCDHA4-201ENST00000378125 E7EVH7 732 aa20.38■□□□□ 0.85
PCDHA4-201ENST00000378125 B4GALT4O60513 344 aa20.38■□□□□ 0.85
PCDHA4-201ENST00000378125 ITGA8P53708 1063 aa20.38■□□□□ 0.85
PCDHA4-201ENST00000378125 PTGISQ16647 500 aa20.38■□□□□ 0.85
PCDHA4-201ENST00000378125 MAP1SQ66K74 1059 aaPredicted RBP20.38■□□□□ 0.85
PCDHA4-201ENST00000378125 KATNAL2Q8IYT4 538 aa20.38■□□□□ 0.85
PCDHA4-201ENST00000378125 HAUS1Q96CS2 278 aa20.38■□□□□ 0.85
PCDHA4-201ENST00000378125 CYTH4Q9UIA0 394 aa20.38■□□□□ 0.85
PCDHA4-201ENST00000378125 CENPFP49454 3210 aa20.38■□□□□ 0.85
PCDHA4-201ENST00000378125 RIPK2O43353 540 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 ACSL3O95573 720 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 KRT1P04264 644 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 CALB1P05937 261 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 PHKA2P46019 1235 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 EIF3BP55884 814 aaKnown RBP20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 LAMC2Q13753 1193 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 ZNF792Q3KQV3 632 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 ZNF667Q5HYK9 610 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 LDLRAD1Q5T700 205 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 EMC10Q5UCC4 262 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 NLRP7Q8WX94 980 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 TWNKQ96RR1 684 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 GINS2Q9Y248 185 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 ITGBL1O95965 494 aaPredicted RBP20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 GH1P01241 217 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 NUDT17P0C025 328 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 IFI35P80217 286 aaPredicted RBP20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 MFSD7Q6UXD7 560 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 C10orf67Q8IYJ2 551 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 ARFGAP2Q8N6H7 521 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 ATL2Q8NHH9 583 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 MAIP1Q8WWC4 291 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 EPN3Q9H201 632 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 PDZD7Q9H5P4 517 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 AAASQ9NRG9 546 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 PRMT7Q9NVM4 692 aaPredicted RBP20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 SLC12A6Q9UHW9 1150 aa20.37■□□□□ 0.85
PCDHA4-201ENST00000378125 BTBD19C9JJ37 291 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 MYO1CO00159 1063 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 IVDP26440 423 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 GBP1P32455 592 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 PSMC4P43686 418 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 NFX1Q12986 1120 aaKnown RBP20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 GSTA5Q7RTV2 222 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 EXD1Q8NHP7 514 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 L3MBTL3Q96JM7 780 aaPredicted RBP20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 PNMA3Q9UL41 463 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 ANK1P16157 1881 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 TCRBV5S1A1TA0A578 114 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 EBAG9O00559 213 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 ASAP2O43150 1006 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 GAS8O95995 478 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 RARGP13631 454 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 ATF2P15336 505 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 ARF4P18085 180 aaPredicted RBP20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 TMEM62Q0P6H9 643 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 SLMAPQ14BN4 828 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 AMHR2Q16671 573 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 PTPN20Q4JDL3 420 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 ZNF484Q5JVG2 852 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 CHADLQ6NUI6 762 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 HOOK3Q86VS8 718 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 SHCBP1Q8NEM2 672 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 SNF8Q96H20 258 aa20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 CDC42EP4Q9H3Q1 356 aaKnown RBP20.36■□□□□ 0.85
PCDHA4-201ENST00000378125 CCL15-CCL14A0A0B4J2E2 113 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 PIK3R2O00459 728 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 LSM8O95777 96 aaKnown RBP20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 PTK6Q13882 451 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 CCL15Q16663 113 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 SMTNL2Q2TAL5 461 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 SPDYCQ5MJ68 293 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 RAPGEF5Q92565 580 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 SLCO2A1Q92959 643 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 CEP83Q9Y592 693 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 A6NNZ2 444 aa20.35■□□□□ 0.85
PCDHA4-201ENST00000378125 RFC1P35251 1148 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms