RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 MYO3BQ8WXR4 1341 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 STAU1O95793 577 aaKnown RBP17.04■□□□□ 0.32
RGP1-201ENST00000378078 ITGB3P05106 788 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 IFNAR1P17181 557 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 GUCY1A3Q02108 690 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 EML3Q32P44 896 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 POM121L1PQ3SYA9 428 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 ELMO3Q96BJ8 720 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 LY9Q9HBG7 655 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.04■□□□□ 0.32
RGP1-201ENST00000378078 PKD2L2Q9NZM6 624 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 UBE2Q2LH0YL09 131 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 NFIBO00712 420 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 RGS5O15539 181 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 APOA1P02647 267 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 PNMA5Q96PV4 448 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 PARK7Q99497 189 aaKnown RBP17.04■□□□□ 0.32
RGP1-201ENST00000378078 CHST12Q9NRB3 414 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 CHGBP05060 677 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 FGFR2P21802 821 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 S100A5P33763 92 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 NLRP9Q7RTR0 991 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 ZNF438Q7Z4V0 828 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 EXD1Q8NHP7 514 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 SPATA18Q8TC71 538 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 ZKSCAN4Q969J2 545 aaPredicted RBP17.04■□□□□ 0.32
RGP1-201ENST00000378078 NACC2Q96BF6 587 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 ATP6V1HQ9UI12 483 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 RPS6KA4O75676 772 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 PRIM2P49643 509 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 GJB7Q6PEY0 223 aa17.04■□□□□ 0.32
RGP1-201ENST00000378078 CLEC16AQ2KHT3 1053 aa17.03■□□□□ 0.32
RGP1-201ENST00000378078 MROH9Q5TGP6 573 aa17.03■□□□□ 0.32
RGP1-201ENST00000378078 CCDC60Q8IWA6 550 aaPredicted RBP17.03■□□□□ 0.32
RGP1-201ENST00000378078 DIS3Q9Y2L1 958 aaKnown RBP17.03■□□□□ 0.32
RGP1-201ENST00000378078 ATP7AQ04656 1500 aa17.03■□□□□ 0.32
RGP1-201ENST00000378078 PQBP1O60828 265 aaKnown RBP17.03■□□□□ 0.32
RGP1-201ENST00000378078 ATF7IP2Q5U623 682 aa17.03■□□□□ 0.32
RGP1-201ENST00000378078 TMEM154Q6P9G4 183 aa17.03■□□□□ 0.32
RGP1-201ENST00000378078 KIF21AQ7Z4S6 1674 aa17.03■□□□□ 0.32
RGP1-201ENST00000378078 B3GALNT2Q8NCR0 500 aa17.03■□□□□ 0.32
RGP1-201ENST00000378078 RRAGCQ9HB90 399 aa17.03■□□□□ 0.32
RGP1-201ENST00000378078 CYP4F12Q9HCS2 524 aa17.03■□□□□ 0.32
RGP1-201ENST00000378078 CYP2C9P11712 490 aa17.03■□□□□ 0.32
RGP1-201ENST00000378078 GSSP48637 474 aa17.03■□□□□ 0.32
RGP1-201ENST00000378078 LLGL2Q6P1M3 1020 aa17.03■□□□□ 0.32
RGP1-201ENST00000378078 THTPAQ9BU02 230 aa17.03■□□□□ 0.32
RGP1-201ENST00000378078 PITPNM2Q9BZ72 1349 aa17.03■□□□□ 0.32
RGP1-201ENST00000378078 RBP5P82980 135 aa17.03■□□□□ 0.32
RGP1-201ENST00000378078 CAMK2GQ13555 558 aaPredicted RBP17.03■□□□□ 0.32
RGP1-201ENST00000378078 USP39Q53GS9 565 aaKnown RBP17.03■□□□□ 0.32
RGP1-201ENST00000378078 ZC3H7BQ9UGR2 993 aaKnown RBP17.03■□□□□ 0.32
RGP1-201ENST00000378078 C17orf102A2RUQ5 167 aa17.03■□□□□ 0.32
RGP1-201ENST00000378078 ERVV-1B6SEH8 477 aa17.03■□□□□ 0.32
RGP1-201ENST00000378078 DGKDQ16760 1214 aa17.03■□□□□ 0.32
RGP1-201ENST00000378078 ZC3H15Q8WU90 426 aaKnown RBP17.03■□□□□ 0.32
RGP1-201ENST00000378078 DCP1AQ9NPI6 582 aaPredicted RBP17.03■□□□□ 0.32
RGP1-201ENST00000378078 MOXD2PA6NHM9 499 aa17.02■□□□□ 0.32
RGP1-201ENST00000378078 CASTOR2A6NHX0 329 aa17.02■□□□□ 0.32
RGP1-201ENST00000378078 TPST1O60507 370 aa17.02■□□□□ 0.32
RGP1-201ENST00000378078 NFIL3Q16649 462 aa17.02■□□□□ 0.32
RGP1-201ENST00000378078 C2CD6Q53TS8 623 aa17.02■□□□□ 0.32
RGP1-201ENST00000378078 MED15Q96RN5 788 aa17.02■□□□□ 0.32
RGP1-201ENST00000378078 TRABDQ9H4I3 376 aa17.02■□□□□ 0.32
RGP1-201ENST00000378078 MYBL1P10243 752 aa17.02■□□□□ 0.32
RGP1-201ENST00000378078 AKAP5P24588 427 aa17.02■□□□□ 0.32
RGP1-201ENST00000378078 GRK2P25098 689 aa17.02■□□□□ 0.32
RGP1-201ENST00000378078 GTF2H1P32780 548 aa17.02■□□□□ 0.32
RGP1-201ENST00000378078 HIST2H2ACQ16777 129 aaPredicted RBP17.02■□□□□ 0.32
RGP1-201ENST00000378078 HIST2H2AA3Q6FI13 130 aa17.02■□□□□ 0.32
RGP1-201ENST00000378078 HEATR4Q86WZ0 1026 aa17.02■□□□□ 0.32
RGP1-201ENST00000378078 DDI1Q8WTU0 396 aa17.02■□□□□ 0.32
RGP1-201ENST00000378078 YWHAQP27348 245 aa17.02■□□□□ 0.32
RGP1-201ENST00000378078 SV2CQ496J9 727 aa17.02■□□□□ 0.32
RGP1-201ENST00000378078 FAM71DQ8N9W8 422 aa17.02■□□□□ 0.32
RGP1-201ENST00000378078 NEUROD4Q9HD90 331 aa17.02■□□□□ 0.32
RGP1-201ENST00000378078 EHD2Q9NZN4 543 aa17.02■□□□□ 0.32
RGP1-201ENST00000378078 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.02■□□□□ 0.31
RGP1-201ENST00000378078 CLASP2O75122 1294 aaKnown RBP17.02■□□□□ 0.31
RGP1-201ENST00000378078 ZNF177Q13360 481 aaPredicted RBP17.02■□□□□ 0.31
RGP1-201ENST00000378078 RNASE11Q8TAA1 199 aaKnown RBP17.02■□□□□ 0.31
RGP1-201ENST00000378078 CLIP3Q96DZ5 547 aa17.02■□□□□ 0.31
RGP1-201ENST00000378078 FAM135BQ49AJ0 1406 aa17.02■□□□□ 0.31
RGP1-201ENST00000378078 EMC2Q15006 297 aa17.02■□□□□ 0.31
RGP1-201ENST00000378078 ABCC2Q92887 1545 aa17.02■□□□□ 0.31
RGP1-201ENST00000378078 GLRBP48167 497 aa17.02■□□□□ 0.31
RGP1-201ENST00000378078 EPHA10Q5JZY3 1008 aa17.02■□□□□ 0.31
RGP1-201ENST00000378078 RNF180Q86T96 592 aa17.02■□□□□ 0.31
RGP1-201ENST00000378078 ZNF512BQ96KM6 892 aaPredicted RBP17.02■□□□□ 0.31
RGP1-201ENST00000378078 RHBGQ9H310 441 aa17.02■□□□□ 0.31
RGP1-201ENST00000378078 CATSPERBQ9H7T0 1116 aa17.02■□□□□ 0.31
RGP1-201ENST00000378078 SERPINB5P36952 375 aa17.01■□□□□ 0.31
RGP1-201ENST00000378078 FCGRTP55899 365 aa17.01■□□□□ 0.31
RGP1-201ENST00000378078 PRKCEQ02156 737 aa17.01■□□□□ 0.31
RGP1-201ENST00000378078 DPYDQ12882 1025 aa17.01■□□□□ 0.31
RGP1-201ENST00000378078 TRIM25Q14258 630 aaKnown RBP17.01■□□□□ 0.31
RGP1-201ENST00000378078 THUMPD3Q9BV44 507 aaKnown RBP17.01■□□□□ 0.31
RGP1-201ENST00000378078 RTN2O75298 545 aa17.01■□□□□ 0.31
RGP1-201ENST00000378078 FBXO38Q6PIJ6 1188 aa17.01■□□□□ 0.31
RGP1-201ENST00000378078 WDCPQ9H6R7 721 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 359 ms