RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 PAFAH2Q99487 392 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 KLHL4Q9C0H6 718 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 PCMTD2Q9NV79 361 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 G3BP2Q9UN86 482 aaKnown RBP9.19□□□□□ -0.94
PCDH9-202ENST00000377865 ADGRA3Q8IWK6 1321 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 S100BP04271 92 aaPredicted RBP9.19□□□□□ -0.94
PCDH9-202ENST00000377865 STIP1P31948 543 aaKnown RBP9.19□□□□□ -0.94
PCDH9-202ENST00000377865 SLC45A4Q5BKX6 768 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 PPP6R3Q5H9R7 873 aaPredicted RBP9.19□□□□□ -0.94
PCDH9-202ENST00000377865 SPDYE1Q8NFV5 336 aaPredicted RBP9.19□□□□□ -0.94
PCDH9-202ENST00000377865 PPP2R3CQ969Q6 453 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 L3MBTL1Q9Y468 752 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 FRMPD4Q14CM0 1322 aa9.19□□□□□ -0.94
PCDH9-202ENST00000377865 SERPINB3P29508 390 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 LAMB3Q13751 1172 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 HYIQ5T013 277 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 LRRC74BQ6ZQY2 392 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 TMPRSS6Q8IU80 811 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 TMEM109Q9BVC6 243 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 NSMCE4AQ9NXX6 385 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 ETAA1Q9NY74 926 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 KLHL8Q9P2G9 620 aaPredicted RBP9.18□□□□□ -0.94
PCDH9-202ENST00000377865 MED1Q15648 1581 aaPredicted RBP9.18□□□□□ -0.94
PCDH9-202ENST00000377865 ECE2O60344 883 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 PYGMP11217 842 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 CUL2Q13617 745 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 NCOA4Q13772 614 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 TRADDQ15628 312 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 SWSAP1Q6NVH7 229 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 XRRA1Q6P2D8 792 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 GIPC2Q8TF65 315 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 DNAJC19Q96DA6 116 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 ZNF518BQ9C0D4 1074 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 VPS33BQ9H267 617 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 PARP4Q9UKK3 1724 aaKnown RBP9.18□□□□□ -0.94
PCDH9-202ENST00000377865 CYP1A2P05177 515 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 EEF1B2P24534 225 aaKnown RBP9.18□□□□□ -0.94
PCDH9-202ENST00000377865 KLRK1P26718 216 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 STXBP2Q15833 593 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 QPCTQ16769 361 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 SPOCD1Q6ZMY3 1216 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 ARMCX2Q7L311 632 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 FBXO36Q8NEA4 188 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 FAM111AQ96PZ2 611 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 LRRC19Q9H756 370 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 DNAJC18Q9H819 358 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 STK32BQ9NY57 414 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 ADA2Q9NZK5 511 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 DTNAQ9Y4J8 743 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 COL5A2P05997 1499 aaPredicted RBP9.18□□□□□ -0.94
PCDH9-202ENST00000377865 SYNJ2BP-COX16A0A087WUM0 186 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 C5orf60A6NFR6 353 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 ZNF263O14978 683 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 GSTA4O15217 222 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 GLRA3O75311 464 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 LSM8O95777 96 aaKnown RBP9.18□□□□□ -0.94
PCDH9-202ENST00000377865 CHEK2O96017 543 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 HNRNPCP07910 306 aaKnown RBP eCLIP9.18□□□□□ -0.94
PCDH9-202ENST00000377865 MYL2P10916 166 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 RASA2Q15283 850 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 BMT2Q1RMZ1 405 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 ZNF568Q3ZCX4 644 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 HGSNATQ68CP4 663 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 MFSD5Q6N075 450 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 SIX6OS1Q8N1H7 587 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 LNX1Q8TBB1 728 aaPredicted RBP9.18□□□□□ -0.94
PCDH9-202ENST00000377865 FAM149B1Q96BN6 582 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 RAVER2Q9HCJ3 691 aaKnown RBP9.18□□□□□ -0.94
PCDH9-202ENST00000377865 COX16Q9P0S2 106 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 AFG3L2Q9Y4W6 797 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 OPLAHO14841 1288 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 C21orf2O43822 256 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 GARTP22102 1010 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 CACNB3P54284 484 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 HDAC4P56524 1084 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 NCALDP61601 193 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 GABPAQ06546 454 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 SAMD3Q8N6K7 520 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 KRT35Q92764 455 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 GMCL1Q96IK5 515 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 VCPIP1Q96JH7 1222 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 RAB6BQ9NRW1 208 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 BAG5Q9UL15 447 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 AKT3Q9Y243 479 aa9.18□□□□□ -0.94
PCDH9-202ENST00000377865 FAM196BA6NMK8 535 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 UBAP1LF5GYI3 381 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 GNGT2O14610 69 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 PSMD3O43242 534 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 CYTH3O43739 400 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 TSHRP16473 764 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 CDK16Q00536 496 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 INPP5AQ14642 412 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 KIF19Q2TAC6 998 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 SNX30Q5VWJ9 437 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 PCNX4Q63HM2 1172 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 IRF2BP2Q7Z5L9 587 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 LINC00116Q8NCU8 138 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 CCDC124Q96CT7 223 aaKnown RBP9.17□□□□□ -0.94
PCDH9-202ENST00000377865 VPS39Q96JC1 886 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 MAML3Q96JK9 1138 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms