RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 TRIM33Q9UPN9 1127 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 UBA1P22314 1058 aaKnown RBP17.18■□□□□ 0.34
TRIM27-202ENST00000377199 GAD2Q05329 585 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 ZNF252P-AS1Q0IIN9 211 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 ZNF568Q3ZCX4 644 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 LACTB2Q53H82 288 aaPredicted RBP17.18■□□□□ 0.34
TRIM27-202ENST00000377199 SLFN12LQ6IEE8 588 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 FAM228AQ86W67 206 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 NCAPG2Q86XI2 1143 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 EMC1Q8N766 993 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 RNF149Q8NC42 400 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 EXD1Q8NHP7 514 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 TRAPPC12Q8WVT3 735 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 SLITRK1Q96PX8 696 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 DHX33Q9H6R0 707 aaKnown RBP17.18■□□□□ 0.34
TRIM27-202ENST00000377199 CISHQ9NSE2 258 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 CHUKO15111 745 aa17.17■□□□□ 0.34
TRIM27-202ENST00000377199 CDH16O75309 829 aa17.17■□□□□ 0.34
TRIM27-202ENST00000377199 PTP4A2Q12974 167 aa17.17■□□□□ 0.34
TRIM27-202ENST00000377199 NLRP4Q96MN2 994 aa17.17■□□□□ 0.34
TRIM27-202ENST00000377199 PCSK1NQ9UHG2 260 aa17.17■□□□□ 0.34
TRIM27-202ENST00000377199 IP6K2Q9UHH9 426 aa17.17■□□□□ 0.34
TRIM27-202ENST00000377199 CNTNAP2Q9UHC6 1331 aa17.17■□□□□ 0.34
TRIM27-202ENST00000377199 MYH9P35579 1960 aaKnown RBP17.17■□□□□ 0.34
TRIM27-202ENST00000377199 LIASO43766 372 aa17.17■□□□□ 0.34
TRIM27-202ENST00000377199 NRLP54845 237 aa17.17■□□□□ 0.34
TRIM27-202ENST00000377199 RTP1P59025 263 aa17.17■□□□□ 0.34
TRIM27-202ENST00000377199 ELF3P78545 371 aaPredicted RBP17.17■□□□□ 0.34
TRIM27-202ENST00000377199 DNAJC3Q13217 504 aa17.17■□□□□ 0.34
TRIM27-202ENST00000377199 ITIH4Q14624 930 aa17.17■□□□□ 0.34
TRIM27-202ENST00000377199 TFAP2BQ92481 460 aa17.17■□□□□ 0.34
TRIM27-202ENST00000377199 RMDN2Q96LZ7 410 aa17.17■□□□□ 0.34
TRIM27-202ENST00000377199 R3HDMLQ9H3Y0 253 aa17.17■□□□□ 0.34
TRIM27-202ENST00000377199 FER1L6Q2WGJ9 1857 aa17.17■□□□□ 0.34
TRIM27-202ENST00000377199 SUN1O94901 812 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 MMP8P22894 467 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 TBXAS1P24557 533 aaPredicted RBP17.16■□□□□ 0.34
TRIM27-202ENST00000377199 TCF7P36402 384 aaPredicted RBP17.16■□□□□ 0.34
TRIM27-202ENST00000377199 STAT5BP51692 787 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 TGFB2P61812 414 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 WDR78Q5VTH9 848 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 SYDE1Q6ZW31 735 aaPredicted RBP17.16■□□□□ 0.34
TRIM27-202ENST00000377199 SPATA21Q7Z572 469 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 ECT2Q9H8V3 914 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 MAFBQ9Y5Q3 323 aaPredicted RBP17.16■□□□□ 0.34
TRIM27-202ENST00000377199 LDHAP00338 332 aaKnown RBP17.16■□□□□ 0.34
TRIM27-202ENST00000377199 CDH8P55286 799 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 CLDN10P78369 228 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 CATSPERGQ6ZRH7 1159 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 PHF13Q86YI8 300 aaPredicted RBP17.16■□□□□ 0.34
TRIM27-202ENST00000377199 RHPN2Q8IUC4 686 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 POLIQ9UNA4 740 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 NFASCO94856 1347 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 TJP3O95049 919 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 KLRC2P26717 231 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 ARL2P36404 184 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 CAV1Q03135 178 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 PDIA2Q13087 525 aaKnown RBP17.16■□□□□ 0.34
TRIM27-202ENST00000377199 XRCC4Q13426 336 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 TREML2Q5T2D2 321 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 TMEM63BQ5T3F8 832 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 TRIM72Q6ZMU5 477 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 ERICH1Q86X53 443 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 TRPM4Q8TD43 1214 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 PCYT2Q99447 389 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 SYNCQ9H7C4 482 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 GGA3Q9NZ52 723 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 AFG3L2Q9Y4W6 797 aa17.16■□□□□ 0.34
TRIM27-202ENST00000377199 WDR91A4D1P6 747 aa17.15■□□□□ 0.34
TRIM27-202ENST00000377199 INO80B-WBP1J3KQ70 363 aa17.15■□□□□ 0.34
TRIM27-202ENST00000377199 TMEM191BP0C7N4 346 aa17.15■□□□□ 0.34
TRIM27-202ENST00000377199 ZNF280AP59817 542 aaPredicted RBP17.15■□□□□ 0.34
TRIM27-202ENST00000377199 C1QBPQ07021 282 aaKnown RBP17.15■□□□□ 0.34
TRIM27-202ENST00000377199 PKN2Q16513 984 aaKnown RBP17.15■□□□□ 0.34
TRIM27-202ENST00000377199 SPOCD1Q6ZMY3 1216 aa17.15■□□□□ 0.34
TRIM27-202ENST00000377199 ARHGEF18Q6ZSZ5 1173 aa17.15■□□□□ 0.34
TRIM27-202ENST00000377199 CKAP2Q8WWK9 683 aa17.15■□□□□ 0.34
TRIM27-202ENST00000377199 PRCCQ92733 491 aaPredicted RBP17.15■□□□□ 0.34
TRIM27-202ENST00000377199 PITPNM3Q9BZ71 974 aa17.15■□□□□ 0.34
TRIM27-202ENST00000377199 INO80BQ9C086 356 aaPredicted RBP17.15■□□□□ 0.34
TRIM27-202ENST00000377199 SLCO1B3Q9NPD5 702 aa17.15■□□□□ 0.34
TRIM27-202ENST00000377199 COL11A1P12107 1806 aaPredicted RBP17.15■□□□□ 0.34
TRIM27-202ENST00000377199 TMEM191CA6NGB0 347 aa17.15■□□□□ 0.34
TRIM27-202ENST00000377199 FOXN2P32314 431 aa17.15■□□□□ 0.34
TRIM27-202ENST00000377199 LACTBP83111 547 aaPredicted RBP17.15■□□□□ 0.34
TRIM27-202ENST00000377199 EFTUD2Q15029 972 aaKnown RBP eCLIP17.15■□□□□ 0.341e-12■■■□□ 16.9
TRIM27-202ENST00000377199 RBM41Q96IZ5 413 aaKnown RBP17.15■□□□□ 0.34
TRIM27-202ENST00000377199 SLC12A4Q9UP95 1085 aa17.15■□□□□ 0.34
TRIM27-202ENST00000377199 L3MBTL1Q9Y468 752 aa17.15■□□□□ 0.34
TRIM27-202ENST00000377199 PSME4Q14997 1843 aa17.14■□□□□ 0.34
TRIM27-202ENST00000377199 A8MUI8 341 aa17.14■□□□□ 0.33
TRIM27-202ENST00000377199 GOLGA8RI6L899 631 aa17.14■□□□□ 0.33
TRIM27-202ENST00000377199 B4GALT5O43286 388 aa17.14■□□□□ 0.33
TRIM27-202ENST00000377199 ADCY3O60266 1144 aa17.14■□□□□ 0.33
TRIM27-202ENST00000377199 PGK2P07205 417 aa17.14■□□□□ 0.33
TRIM27-202ENST00000377199 RPSAP08865 295 aaKnown RBP17.14■□□□□ 0.33
TRIM27-202ENST00000377199 GHRP10912 638 aa17.14■□□□□ 0.33
TRIM27-202ENST00000377199 PSMA2P25787 234 aa17.14■□□□□ 0.33
TRIM27-202ENST00000377199 RFC1P35251 1148 aaPredicted RBP17.14■□□□□ 0.33
TRIM27-202ENST00000377199 ZNF699Q32M78 642 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms