RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 IL9P15248 144 aa13.29□□□□□ -0.28
VRK3-202ENST00000377011 TNFRSF8P28908 595 aa13.29□□□□□ -0.28
VRK3-202ENST00000377011 EIF4A3P38919 411 aaKnown RBP13.29□□□□□ -0.28
VRK3-202ENST00000377011 COASYQ13057 564 aa13.29□□□□□ -0.28
VRK3-202ENST00000377011 FAM26FQ5R3K3 315 aa13.29□□□□□ -0.28
VRK3-202ENST00000377011 MPZL3Q6UWV2 235 aa13.29□□□□□ -0.28
VRK3-202ENST00000377011 ALKAL1Q6UXT8 129 aa13.29□□□□□ -0.28
VRK3-202ENST00000377011 STRA6Q9BX79 667 aa13.29□□□□□ -0.28
VRK3-202ENST00000377011 GPR62Q9BZJ7 368 aa13.29□□□□□ -0.28
VRK3-202ENST00000377011 VPS18Q9P253 973 aa13.29□□□□□ -0.28
VRK3-202ENST00000377011 PDCD11Q14690 1871 aaKnown RBP13.29□□□□□ -0.28
VRK3-202ENST00000377011 ATP8B3O60423 1300 aa13.29□□□□□ -0.28
VRK3-202ENST00000377011 FRMD3A2A2Y4 597 aa13.28□□□□□ -0.28
VRK3-202ENST00000377011 GTF2BQ00403 316 aa13.28□□□□□ -0.28
VRK3-202ENST00000377011 ADAM15Q13444 863 aa13.28□□□□□ -0.28
VRK3-202ENST00000377011 KCNC3Q14003 757 aa13.28□□□□□ -0.28
VRK3-202ENST00000377011 EDRF1Q3B7T1 1238 aa13.28□□□□□ -0.28
VRK3-202ENST00000377011 SLC10A6Q3KNW5 377 aa13.28□□□□□ -0.28
VRK3-202ENST00000377011 GLE1Q53GS7 698 aaKnown RBP13.28□□□□□ -0.28
VRK3-202ENST00000377011 SCARA3Q6AZY7 606 aa13.28□□□□□ -0.28
VRK3-202ENST00000377011 CCNI2Q6ZMN8 369 aaPredicted RBP13.28□□□□□ -0.28
VRK3-202ENST00000377011 ZNF720Q7Z2F6 126 aa13.28□□□□□ -0.28
VRK3-202ENST00000377011 TMC7Q7Z402 723 aa13.28□□□□□ -0.28
VRK3-202ENST00000377011 CREG2Q8IUH2 290 aa13.28□□□□□ -0.28
VRK3-202ENST00000377011 FAM178BQ8IXR5 827 aa13.28□□□□□ -0.28
VRK3-202ENST00000377011 RNF168Q8IYW5 571 aaPredicted RBP13.28□□□□□ -0.28
VRK3-202ENST00000377011 C3orf58Q8NDZ4 430 aa13.28□□□□□ -0.28
VRK3-202ENST00000377011 C18orf25Q96B23 403 aaPredicted RBP13.28□□□□□ -0.28
VRK3-202ENST00000377011 PABPC5Q96DU9 382 aaKnown RBP13.28□□□□□ -0.28
VRK3-202ENST00000377011 FAM84AQ96KN4 292 aa13.28□□□□□ -0.28
VRK3-202ENST00000377011 PPP1R10Q96QC0 940 aaKnown RBP13.28□□□□□ -0.28
VRK3-202ENST00000377011 MMRN2Q9H8L6 949 aa13.28□□□□□ -0.28
VRK3-202ENST00000377011 ENTPD7Q9NQZ7 604 aa13.28□□□□□ -0.28
VRK3-202ENST00000377011 LARSQ9P2J5 1176 aaKnown RBP13.28□□□□□ -0.28
VRK3-202ENST00000377011 HPCAL4Q9UM19 191 aa13.28□□□□□ -0.28
VRK3-202ENST00000377011 LZTS1Q9Y250 596 aa13.28□□□□□ -0.28
VRK3-202ENST00000377011 FAN1Q9Y2M0 1017 aa13.28□□□□□ -0.28
VRK3-202ENST00000377011 MACROD2A1Z1Q3 448 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 LRRC53A6NM62 1247 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 LRRIQ3A6PVS8 624 aaPredicted RBP13.27□□□□□ -0.28
VRK3-202ENST00000377011 TBCAO75347 108 aaKnown RBP13.27□□□□□ -0.28
VRK3-202ENST00000377011 KIF4AO95239 1232 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 ALDH2P05091 517 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 SERPING1P05155 500 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 CXCL8P10145 99 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 GRM5P41594 1212 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 MAGEA1P43355 309 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 LMAN1P49257 510 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 WNT7BP56706 349 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 MRPS5P82675 430 aaKnown RBP13.27□□□□□ -0.28
VRK3-202ENST00000377011 CYP27A1Q02318 531 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 UBE3AQ05086 875 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 DUSP6Q16828 381 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 DCAF4L1Q3SXM0 396 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 LLGL2Q6P1M3 1020 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 CACNA2D4Q7Z3S7 1137 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 DDX53Q86TM3 631 aaKnown RBP13.27□□□□□ -0.28
VRK3-202ENST00000377011 GOLGA6L1Q8N7Z2 621 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 MRPL43Q8N983 215 aaKnown RBP13.27□□□□□ -0.28
VRK3-202ENST00000377011 ATXN2LQ8WWM7 1075 aaKnown RBP13.27□□□□□ -0.28
VRK3-202ENST00000377011 TMEM169Q96HH4 297 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 FAM193BQ96PV7 902 aaPredicted RBP13.27□□□□□ -0.28
VRK3-202ENST00000377011 ADPGKQ9BRR6 497 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 TMEM175Q9BSA9 504 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 TCHPQ9BT92 498 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 APOL5Q9BWW9 433 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 TLE6Q9H808 572 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 CD320Q9NPF0 282 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 UBN1Q9NPG3 1134 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 FAM207AQ9NSI2 230 aaPredicted RBP13.27□□□□□ -0.28
VRK3-202ENST00000377011 PANK4Q9NVE7 773 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 ANK1P16157 1881 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 PLXNA3P51805 1871 aa13.27□□□□□ -0.28
VRK3-202ENST00000377011 SMIM28A0A1B0GU29 152 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 GRXCR2A6NFK2 248 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 C2CD2LO14523 706 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 LILRB3O75022 631 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 SRGAP2O75044 1071 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 TOM1L1O75674 476 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 CXCL14O95715 111 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 MCF2P10911 925 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 ADSSP30520 456 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 HOXD13P35453 343 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 PPM1AP35813 382 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 GUCY2FP51841 1108 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 SMTNP53814 917 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 MCL1Q07820 350 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 GRIK3Q13003 919 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 STRN3Q13033 797 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 XKR4Q5GH76 650 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 TJAP1Q5JTD0 557 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 RRAGAQ7L523 313 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 TRIM59Q8IWR1 403 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 KCNN1Q92952 543 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 SNX27Q96L92 541 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 NOX5Q96PH1 765 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 KANSL3Q9P2N6 904 aa13.27□□□□□ -0.29
VRK3-202ENST00000377011 I3L4J1 428 aa13.26□□□□□ -0.29
VRK3-202ENST00000377011 PDE2AO00408 941 aaPredicted RBP13.26□□□□□ -0.29
VRK3-202ENST00000377011 EPHB6O15197 1021 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms