RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 PGLYRP2Q96PD5 576 aa23.77■■□□□ 1.4
SRM-201ENST00000376957 KCNK12Q9HB15 430 aa23.77■■□□□ 1.4
SRM-201ENST00000376957 DNMT3BQ9UBC3 853 aaKnown RBP23.77■■□□□ 1.4
SRM-201ENST00000376957 KINO60870 393 aaKnown RBP23.76■■□□□ 1.39
SRM-201ENST00000376957 OR4Q2P0C623 313 aa23.76■■□□□ 1.39
SRM-201ENST00000376957 TWF1Q12792 350 aa23.76■■□□□ 1.39
SRM-201ENST00000376957 SLC39A12Q504Y0 691 aa23.76■■□□□ 1.39
SRM-201ENST00000376957 LMBRD2Q68DH5 695 aaPredicted RBP23.76■■□□□ 1.39
SRM-201ENST00000376957 PDZD4Q76G19 769 aaPredicted RBP23.76■■□□□ 1.39
SRM-201ENST00000376957 TRAPPC11Q7Z392 1133 aa23.76■■□□□ 1.39
SRM-201ENST00000376957 FEZF2Q8TBJ5 459 aa23.76■■□□□ 1.39
SRM-201ENST00000376957 BORCS6Q96GS4 357 aa23.76■■□□□ 1.39
SRM-201ENST00000376957 CORO1BQ9BR76 489 aa23.76■■□□□ 1.39
SRM-201ENST00000376957 KCTD10Q9H3F6 313 aa23.76■■□□□ 1.39
SRM-201ENST00000376957 AVENQ9NQS1 362 aaPredicted RBP23.76■■□□□ 1.39
SRM-201ENST00000376957 TRAF3IP3Q9Y228 551 aa23.76■■□□□ 1.39
SRM-201ENST00000376957 HCN4Q9Y3Q4 1203 aa23.76■■□□□ 1.39
SRM-201ENST00000376957 TMEM221A6NGB7 291 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 M0R296 226 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 CLSTN1O94985 981 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 ASGR2P07307 311 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 RHOP08100 348 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 PCSK1P29120 753 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 DUSP4Q13115 394 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 VEPH1Q14D04 833 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 NFE2Q16621 373 aaPredicted RBP23.75■■□□□ 1.39
SRM-201ENST00000376957 CEP135Q66GS9 1140 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 CENPPQ6IPU0 288 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 ITIH5Q86UX2 942 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 OR5B17Q8NGF7 314 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 SPPL2BQ8TCT7 592 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 FGF13Q92913 245 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 SMARCE1Q969G3 411 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 PBXIP1Q96AQ6 731 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 MYADMQ96S97 322 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 ACBD6Q9BR61 282 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 ZCWPW1Q9H0M4 648 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 ASAH2Q9NR71 780 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 HCFC1R1Q9NWW0 138 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 GDE1Q9NZC3 331 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 SIX4Q9UIU6 781 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 ASB3Q9Y575 518 aa23.75■■□□□ 1.39
SRM-201ENST00000376957 MTMR11A4FU01 709 aa23.74■■□□□ 1.39
SRM-201ENST00000376957 MICAL2O94851 1124 aa23.74■■□□□ 1.39
SRM-201ENST00000376957 FGF19O95750 216 aa23.74■■□□□ 1.39
SRM-201ENST00000376957 TNNC1P63316 161 aa23.74■■□□□ 1.39
SRM-201ENST00000376957 NTHL1P78549 312 aa23.74■■□□□ 1.39
SRM-201ENST00000376957 BIRC3Q13489 604 aa23.74■■□□□ 1.39
SRM-201ENST00000376957 TAF12Q16514 161 aa23.74■■□□□ 1.39
SRM-201ENST00000376957 BMP8AQ7Z5Y6 402 aa23.74■■□□□ 1.39
SRM-201ENST00000376957 SUGP1Q8IWZ8 645 aaKnown RBP23.74■■□□□ 1.39
SRM-201ENST00000376957 ELOA2Q8IYF1 753 aaPredicted RBP23.74■■□□□ 1.39
SRM-201ENST00000376957 PDCL2Q8N4E4 241 aa23.74■■□□□ 1.39
SRM-201ENST00000376957 SYAP1Q96A49 352 aaPredicted RBP23.74■■□□□ 1.39
SRM-201ENST00000376957 MMS19Q96T76 1030 aa23.74■■□□□ 1.39
SRM-201ENST00000376957 DMAC2Q9NW81 257 aa23.74■■□□□ 1.39
SRM-201ENST00000376957 MAPK8IP1Q9UQF2 711 aa23.74■■□□□ 1.39
SRM-201ENST00000376957 YIPF1Q9Y548 306 aa23.74■■□□□ 1.39
SRM-201ENST00000376957 N4BP1O75113 896 aaKnown RBP23.73■■□□□ 1.39
SRM-201ENST00000376957 KRT13P13646 458 aa23.73■■□□□ 1.39
SRM-201ENST00000376957 ATICP31939 592 aa23.73■■□□□ 1.39
SRM-201ENST00000376957 PNOCQ13519 176 aa23.73■■□□□ 1.39
SRM-201ENST00000376957 SNW1Q13573 536 aaKnown RBP23.73■■□□□ 1.39
SRM-201ENST00000376957 STIM1Q13586 685 aa23.73■■□□□ 1.39
SRM-201ENST00000376957 MGAT5BQ3V5L5 792 aa23.73■■□□□ 1.39
SRM-201ENST00000376957 ADGRF2Q8IZF7 708 aa23.73■■□□□ 1.39
SRM-201ENST00000376957 ENGASEQ8NFI3 743 aa23.73■■□□□ 1.39
SRM-201ENST00000376957 OR10T2Q8NGX3 314 aa23.73■■□□□ 1.39
SRM-201ENST00000376957 FAM200AQ8TCP9 573 aa23.73■■□□□ 1.39
SRM-201ENST00000376957 C11orf16Q9NQ32 467 aa23.73■■□□□ 1.39
SRM-201ENST00000376957 DDX43Q9NXZ2 648 aaKnown RBP23.73■■□□□ 1.39
SRM-201ENST00000376957 MYO10Q9HD67 2058 aa23.72■■□□□ 1.39
SRM-201ENST00000376957 MAPK13O15264 365 aa23.72■■□□□ 1.39
SRM-201ENST00000376957 FAM163BP0C2L3 166 aa23.72■■□□□ 1.39
SRM-201ENST00000376957 COL9A1P20849 921 aa23.72■■□□□ 1.39
SRM-201ENST00000376957 NR2F2P24468 414 aa23.72■■□□□ 1.39
SRM-201ENST00000376957 MAPRE1Q15691 268 aaKnown RBP23.72■■□□□ 1.39
SRM-201ENST00000376957 NFIL3Q16649 462 aa23.72■■□□□ 1.39
SRM-201ENST00000376957 ATAD1Q8NBU5 361 aa23.72■■□□□ 1.39
SRM-201ENST00000376957 CXorf38Q8TB03 319 aa23.72■■□□□ 1.39
SRM-201ENST00000376957 PARD3BQ8TEW8 1205 aa23.72■■□□□ 1.39
SRM-201ENST00000376957 SEPT5Q99719 369 aaPredicted RBP23.72■■□□□ 1.39
SRM-201ENST00000376957 TSG101Q99816 390 aa23.72■■□□□ 1.39
SRM-201ENST00000376957 GPR88Q9GZN0 384 aa23.72■■□□□ 1.39
SRM-201ENST00000376957 L1RE1Q9UN81 338 aa23.72■■□□□ 1.39
SRM-201ENST00000376957 SLC27A5Q9Y2P5 690 aa23.72■■□□□ 1.39
SRM-201ENST00000376957 PCDHB5Q9Y5E4 795 aa23.72■■□□□ 1.39
SRM-201ENST00000376957 PTPRJQ12913 1337 aa23.71■■□□□ 1.39
SRM-201ENST00000376957 IKBKBO14920 756 aa23.71■■□□□ 1.39
SRM-201ENST00000376957 PPP1R2P41236 205 aa23.71■■□□□ 1.39
SRM-201ENST00000376957 ADAM9Q13443 819 aa23.71■■□□□ 1.39
SRM-201ENST00000376957 ZNF658Q5TYW1 1059 aaPredicted RBP23.71■■□□□ 1.39
SRM-201ENST00000376957 INTS8Q75QN2 995 aaKnown RBP23.71■■□□□ 1.39
SRM-201ENST00000376957 ITFG1Q8TB96 612 aa23.71■■□□□ 1.39
SRM-201ENST00000376957 TMC2Q8TDI7 906 aa23.71■■□□□ 1.39
SRM-201ENST00000376957 TMEM209Q96SK2 561 aa23.71■■□□□ 1.39
SRM-201ENST00000376957 SNX25Q9H3E2 840 aa23.71■■□□□ 1.39
SRM-201ENST00000376957 ABI2Q9NYB9 513 aaPredicted RBP23.71■■□□□ 1.39
SRM-201ENST00000376957 FBXL21Q9UKT6 434 aa23.71■■□□□ 1.39
SRM-201ENST00000376957 DUSP12Q9UNI6 340 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms