RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 GLRA2P23416 452 aa13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 C1QBPQ07021 282 aaKnown RBP13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 STRN3Q13033 797 aa13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 EMC2Q15006 297 aa13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 C4orf33Q8N1A6 199 aa13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 TTLL6Q8N841 843 aa13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 GBP7Q8N8V2 638 aaPredicted RBP13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 BBOF1Q8ND07 529 aa13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 UTP4Q969X6 686 aaKnown RBP13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 CCDC77Q9BR77 488 aa13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 PARVAQ9NVD7 372 aa13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 KLHL14Q9P2G3 628 aa13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 ZNRF3Q9ULT6 936 aa13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 ACTL7BQ9Y614 415 aa13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 FER1L6Q2WGJ9 1857 aa13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 ABHD2P08910 425 aa13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 FSTL1Q12841 308 aa13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 RNF43Q68DV7 783 aa13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 SNRNP48Q6IEG0 339 aaKnown RBP13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 PPP1R21Q6ZMI0 780 aa13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 ANKRD35Q8N283 1001 aa13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 ALLCQ8N6M5 410 aa13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 AGBL3Q8NEM8 1001 aa13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 REPS2Q8NFH8 660 aa13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 ZNF668Q96K58 619 aaPredicted RBP13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 TMEM121Q9BTD3 319 aa13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 MYOZ2Q9NPC6 264 aa13.11□□□□□ -0.31
TNFSF13B-201ENST00000375887 A0A1W2PPM1 405 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 TCRBV5S1A1TA0A578 114 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 LRRIQ4A6NIV6 560 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 RPA3P35244 121 aaPredicted RBP13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 POLGP54098 1239 aaPredicted RBP13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 MKRN3Q13064 507 aaKnown RBP13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 NCOA4Q13772 614 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 SLC1A5Q15758 541 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 TRIM72Q6ZMU5 477 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 RCOR2Q8IZ40 523 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 RTKN2Q8IZC4 609 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 NSMCE1Q8WV22 266 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 MCEEQ96PE7 176 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 MSTO1Q9BUK6 570 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 NFASCO94856 1347 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 A0A0B4J269 797 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 GOLGA8SH3BPF8 625 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 GOLGA8MH3BSY2 632 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 K7ERI5 159 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 MAFGO15525 162 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 KRT1P04264 644 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 CCNB1P14635 433 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 MSH2P43246 934 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 ZNF132P52740 706 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 IL9RQ01113 521 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 OASLQ15646 514 aaKnown RBP13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 XRRA1Q6P2D8 792 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 WDTC1Q8N5D0 677 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 NSUN6Q8TEA1 469 aaKnown RBP13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 MYLK2Q9H1R3 596 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 TRABDQ9H4I3 376 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 IP6K2Q9UHH9 426 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 SCINQ9Y6U3 715 aa13.1□□□□□ -0.31
TNFSF13B-201ENST00000375887 KCNA3P22001 575 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 BRD2P25440 801 aaKnown RBP13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 TNFSF9P41273 254 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 EAPPQ56P03 285 aaPredicted RBP13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 XKR3Q5GH77 459 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 RNASEH2BQ5TBB1 312 aaKnown RBP13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 SPOCD1Q6ZMY3 1216 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 ZBED8Q8IZ13 594 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 CFAP57Q96MR6 1250 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 PORCNQ9H237 461 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 ZNF214Q9UL59 606 aaPredicted RBP13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 CHKBQ9Y259 395 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 ADGRA2Q96PE1 1338 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 MAGEB2O15479 319 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 ECM2O94769 699 aaPredicted RBP13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 TJP3O95049 919 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 UNC5CO95185 931 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 IFNB1P01574 187 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 GPX6P59796 221 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 ACVR2BQ13705 512 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 MOGSQ13724 837 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 SAMD7Q7Z3H4 446 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 ERICH1Q86X53 443 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 ANKMY2Q8IV38 441 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 UBR7Q8N806 425 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 CGRRF1Q99675 332 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 MAK16Q9BXY0 300 aaKnown RBP13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 VPS37BQ9H9H4 285 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 ETNK1Q9HBU6 452 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 PHTF1Q9UMS5 762 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 MYH9P35579 1960 aaKnown RBP13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 RGPD3A6NKT7 1758 aaPredicted RBP13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 RGPD4Q7Z3J3 1758 aa13.09□□□□□ -0.31
TNFSF13B-201ENST00000375887 ARID2Q68CP9 1835 aa13.08□□□□□ -0.32
TNFSF13B-201ENST00000375887 hCG_1818297A0A087WSY0 165 aa13.08□□□□□ -0.32
TNFSF13B-201ENST00000375887 SPATA31C2B4DYI2 1134 aa13.08□□□□□ -0.32
TNFSF13B-201ENST00000375887 ALOX15BO15296 676 aa13.08□□□□□ -0.32
TNFSF13B-201ENST00000375887 SUPT20HL2P0C7V6 817 aa13.08□□□□□ -0.32
TNFSF13B-201ENST00000375887 KRT15P19012 456 aa13.08□□□□□ -0.32
TNFSF13B-201ENST00000375887 CDKN2BP42772 138 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms