RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 BSNDQ8WZ55 320 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 HAUS1Q96CS2 278 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 SMC6Q96SB8 1091 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 LBHD1Q9BQE6 289 aaPredicted RBP14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 ST6GALNAC4Q9H4F1 302 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 AGO4Q9HCK5 861 aaKnown RBP14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 LRRC42Q9Y546 428 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 GOLGA8SH3BPF8 625 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 GOLGA8MH3BSY2 632 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 ATP5HO75947 161 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 PDHA1P08559 390 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 ARSEP51690 589 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 GPS1Q13098 491 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 TKFCQ3LXA3 575 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 PLEKHG4Q58EX7 1191 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 MON1BQ7L1V2 547 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 OTOAQ7RTW8 1153 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 SCYL3Q8IZE3 742 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 ARMC2Q8NEN0 867 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 CHURC1Q8WUH1 139 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 ACSF2Q96CM8 615 aaPredicted RBP14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 MFSD14AQ96MC6 490 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 FAM213AQ9BRX8 229 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 MOV10L1Q9BXT6 1211 aaKnown RBP14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 MAK16Q9BXY0 300 aaKnown RBP14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 DENND2DQ9H6A0 471 aaPredicted RBP14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 NPHS2Q9NP85 383 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 A6NHS1 94 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 CLGNO14967 610 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 PRPF4O43172 522 aaKnown RBP eCLIP14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 ABHD2P08910 425 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 ATF7P17544 494 aaPredicted RBP14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 ALDH3A1P30838 453 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 MRPS9P82933 396 aaKnown RBP14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 MAMLD1Q13495 774 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 MTM1Q13496 603 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 HHATQ5VTY9 493 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 ANO7Q6IWH7 933 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 MTDHQ86UE4 582 aaKnown RBP14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 ANKMY2Q8IV38 441 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 ZBED8Q8IZ13 594 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 IWS1Q96ST2 819 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 DCTN4Q9UJW0 460 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 DNALI1O14645 258 aaPredicted RBP14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 LIASO43766 372 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 ATP9AO75110 1047 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 DCTN3O75935 186 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 PCK1P35558 622 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 OVGP1Q12889 678 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 MAPK6Q16659 721 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 SUPT20HL1Q3ZLR7 823 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 LVRNQ6Q4G3 990 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 MAP4K3Q8IVH8 894 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 KATNAL2Q8IYT4 538 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 RIBC1Q8N443 379 aaPredicted RBP14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 ZNF483Q8TF39 744 aaPredicted RBP14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 ZNF75CPQ92670 426 aaPredicted RBP14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 INPP5DQ92835 1189 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 FAM81BQ96LP2 452 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 UBN1Q9NPG3 1134 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 KMT5AQ9NQR1 393 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 ZFATQ9P243 1243 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 EXOC7Q9UPT5 735 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 PCDHB2Q9Y5E7 798 aa14.9□□□□□ -0.02
CLCNKA-202ENST00000375692 DPPA5A6NC42 116 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 CYP1A1P04798 512 aaPredicted RBP14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 WNT7BP56706 349 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 GCNT1Q02742 428 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 GAD2Q05329 585 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 PTP4A2Q12974 167 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 NFX1Q12986 1120 aaKnown RBP14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 RFWD3Q6PCD5 774 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 TMC2Q8TDI7 906 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 ALG13Q9NP73 1137 aaKnown RBP14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 PICK1Q9NRD5 415 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 HOMER2Q9NSB8 354 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 C1orf112Q9NSG2 853 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 TLR3O15455 904 aaKnown RBP14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 PSTPIP1O43586 416 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 TYROBPO43914 113 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 LUC7L3O95232 432 aaKnown RBP14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 MYBL1P10243 752 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 KRT4P19013 534 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 PSMC4P43686 418 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 PTDSS1P48651 473 aaKnown RBP14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 TUBP50607 506 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 HMGCS2P54868 508 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 SNRPFP62306 86 aaKnown RBP14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 RPL7AP62424 266 aaKnown RBP14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 NR1H3Q13133 447 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 MTMR1Q13613 665 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 EFTUD2Q15029 972 aaKnown RBP eCLIP14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 MFSD7Q6UXD7 560 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 NLRP9Q7RTR0 991 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 TAB3Q8N5C8 712 aaPredicted RBP14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 EXD1Q8NHP7 514 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 C10orf88Q9H8K7 445 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 CCPG1Q9ULG6 757 aa14.89□□□□□ -0.03
CLCNKA-202ENST00000375692 SYNPO2Q9UMS6 1093 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms