RNA–Protein interactions for RNA: ENST00000375549.7

SDHD-201, Transcript of succinate dehydrogenase complex subunit D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHD, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-201ENST00000375549 SLC9A7Q96T83 725 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 SNX25Q9H3E2 840 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 DEF6Q9H4E7 631 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 NHEJ1Q9H9Q4 299 aaPredicted RBP13.12□□□□□ -0.31
SDHD-201ENST00000375549 RC3H2Q9HBD1 1191 aaKnown RBP13.12□□□□□ -0.31
SDHD-201ENST00000375549 ACP6Q9NPH0 428 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 ARHGAP20Q9P2F6 1191 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 PUF60Q9UHX1 559 aaKnown RBP13.12□□□□□ -0.31
SDHD-201ENST00000375549 BARX2Q9UMQ3 279 aaPredicted RBP13.12□□□□□ -0.31
SDHD-201ENST00000375549 CNTN6Q9UQ52 1028 aa13.12□□□□□ -0.31
SDHD-201ENST00000375549 TIMM13Q9Y5L4 95 aaPredicted RBP13.12□□□□□ -0.31
SDHD-201ENST00000375549 BZW2Q9Y6E2 419 aaKnown RBP13.12□□□□□ -0.31
SDHD-201ENST00000375549 MKI67P46013 3256 aaKnown RBP13.11□□□□□ -0.31
SDHD-201ENST00000375549 TTC3P53804 2025 aa13.11□□□□□ -0.31
SDHD-201ENST00000375549 A8MXQ7 604 aa13.11□□□□□ -0.31
SDHD-201ENST00000375549 CILPO75339 1184 aa13.11□□□□□ -0.31
SDHD-201ENST00000375549 TACC1O75410 805 aa13.11□□□□□ -0.31
SDHD-201ENST00000375549 GNL1P36915 607 aaPredicted RBP13.11□□□□□ -0.31
SDHD-201ENST00000375549 PRKCIP41743 596 aa13.11□□□□□ -0.31
SDHD-201ENST00000375549 ALDH7A1P49419 539 aaKnown RBP13.11□□□□□ -0.31
SDHD-201ENST00000375549 AARSP49588 968 aaKnown RBP eCLIP13.11□□□□□ -0.31
SDHD-201ENST00000375549 PDE6CP51160 858 aa13.11□□□□□ -0.31
SDHD-201ENST00000375549 BPIFB4P59827 614 aa13.11□□□□□ -0.31
SDHD-201ENST00000375549 INCA1Q0VD86 236 aa13.11□□□□□ -0.31
SDHD-201ENST00000375549 MTF1Q14872 753 aa13.11□□□□□ -0.31
SDHD-201ENST00000375549 HS1BP3Q53T59 392 aa13.11□□□□□ -0.31
SDHD-201ENST00000375549 TAF3Q5VWG9 929 aa13.11□□□□□ -0.31
SDHD-201ENST00000375549 WSCD1Q658N2 575 aa13.11□□□□□ -0.31
SDHD-201ENST00000375549 ZNF571Q7Z3V5 609 aaPredicted RBP13.11□□□□□ -0.31
SDHD-201ENST00000375549 NOP9Q86U38 636 aaKnown RBP13.11□□□□□ -0.31
SDHD-201ENST00000375549 HERC6Q8IVU3 1022 aa13.11□□□□□ -0.31
SDHD-201ENST00000375549 PHOSPHO2Q8TCD6 241 aa13.11□□□□□ -0.31
SDHD-201ENST00000375549 WHAMMQ8TF30 809 aa13.11□□□□□ -0.31
SDHD-201ENST00000375549 KBTBD7Q8WVZ9 684 aa13.11□□□□□ -0.31
SDHD-201ENST00000375549 TMEM176AQ96HP8 235 aa13.11□□□□□ -0.31
SDHD-201ENST00000375549 TWNKQ96RR1 684 aa13.11□□□□□ -0.31
SDHD-201ENST00000375549 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.11□□□□□ -0.31
SDHD-201ENST00000375549 HMGXB4Q9UGU5 601 aa13.11□□□□□ -0.31
SDHD-201ENST00000375549 ADAM28Q9UKQ2 775 aa13.11□□□□□ -0.31
SDHD-201ENST00000375549 MRPL42Q9Y6G3 142 aaKnown RBP13.11□□□□□ -0.31
SDHD-201ENST00000375549 TRIP11Q15643 1979 aa13.11□□□□□ -0.31
SDHD-201ENST00000375549 ARHGAP6O43182 974 aa13.1□□□□□ -0.31
SDHD-201ENST00000375549 TRAPPC3O43617 180 aa13.1□□□□□ -0.31
SDHD-201ENST00000375549 PDGFRBP09619 1106 aa13.1□□□□□ -0.31
SDHD-201ENST00000375549 CYP11B1P15538 503 aa13.1□□□□□ -0.31
SDHD-201ENST00000375549 WARSP23381 471 aaKnown RBP13.1□□□□□ -0.31
SDHD-201ENST00000375549 GNA15P30679 374 aa13.1□□□□□ -0.31
SDHD-201ENST00000375549 ZNF132P52740 706 aa13.1□□□□□ -0.31
SDHD-201ENST00000375549 RAD23BP54727 409 aa13.1□□□□□ -0.31
SDHD-201ENST00000375549 HTRA4P83105 476 aaPredicted RBP13.1□□□□□ -0.31
SDHD-201ENST00000375549 C9orf50Q5SZB4 431 aa13.1□□□□□ -0.31
SDHD-201ENST00000375549 RAD9BQ6WBX8 426 aa13.1□□□□□ -0.31
SDHD-201ENST00000375549 LIMS2Q7Z4I7 341 aa13.1□□□□□ -0.31
SDHD-201ENST00000375549 OSTM1Q86WC4 334 aa13.1□□□□□ -0.31
SDHD-201ENST00000375549 METTL23Q86XA0 190 aa13.1□□□□□ -0.31
SDHD-201ENST00000375549 FIBCD1Q8N539 461 aa13.1□□□□□ -0.31
SDHD-201ENST00000375549 EPS8L1Q8TE68 723 aa13.1□□□□□ -0.31
SDHD-201ENST00000375549 SLC20A1Q8WUM9 679 aa13.1□□□□□ -0.31
SDHD-201ENST00000375549 SUSD3Q96L08 255 aa13.1□□□□□ -0.31
SDHD-201ENST00000375549 RNPC3Q96LT9 517 aaKnown RBP13.1□□□□□ -0.31
SDHD-201ENST00000375549 ZNF558Q96NG5 402 aa13.1□□□□□ -0.31
SDHD-201ENST00000375549 NT5C1AQ9BXI3 368 aa13.1□□□□□ -0.31
SDHD-201ENST00000375549 ELOVL4Q9GZR5 314 aa13.1□□□□□ -0.31
SDHD-201ENST00000375549 FAM124BQ9H5Z6 455 aaPredicted RBP13.1□□□□□ -0.31
SDHD-201ENST00000375549 SEPT11Q9NVA2 429 aaKnown RBP13.1□□□□□ -0.31
SDHD-201ENST00000375549 MARCH5Q9NX47 278 aa13.1□□□□□ -0.31
SDHD-201ENST00000375549 INSL6Q9Y581 213 aa13.1□□□□□ -0.31
SDHD-201ENST00000375549 SSU72P8A0A1W2PR75 194 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 ARHGEF37A1IGU5 675 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 M0QZQ0 153 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 THAP12O43422 761 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 HCRTO43612 131 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 TLL1O43897 1013 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 AKR1B10O60218 316 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 PAEPP09466 180 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 FAM163BP0C2L3 166 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 CD19P15391 556 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 LAG3P18627 525 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 TNFAIP3P21580 790 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 LMO2P25791 158 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 CYLC1P35663 651 aaPredicted RBP13.09□□□□□ -0.31
SDHD-201ENST00000375549 SHHQ15465 462 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 RASIP1Q5U651 963 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 KCNT2Q6UVM3 1135 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 ACOT1Q86TX2 421 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 VPS36Q86VN1 386 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 UNC93AQ86WB7 457 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 CCDC170Q8IYT3 715 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 TMEM86AQ8N2M4 240 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 SLC4A11Q8NBS3 891 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 HEXIM2Q96MH2 286 aaKnown RBP13.09□□□□□ -0.31
SDHD-201ENST00000375549 RAD9AQ99638 391 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 AGPAT1Q99943 283 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 PDCL3Q9H2J4 239 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 SPTLC3Q9NUV7 552 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 DDX43Q9NXZ2 648 aaKnown RBP13.09□□□□□ -0.31
SDHD-201ENST00000375549 NOCTQ9UK39 431 aaKnown RBP13.09□□□□□ -0.31
SDHD-201ENST00000375549 DSEQ9UL01 958 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 PYCARDQ9ULZ3 195 aa13.09□□□□□ -0.31
SDHD-201ENST00000375549 PCDHB8Q9UN66 801 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms