RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 TWF1Q12792 350 aa16.82■□□□□ 0.28
SDHB-201ENST00000375499 PRSS36Q5K4E3 855 aa16.82■□□□□ 0.28
SDHB-201ENST00000375499 PARM1Q6UWI2 310 aa16.82■□□□□ 0.28
SDHB-201ENST00000375499 HS6ST3Q8IZP7 471 aa16.82■□□□□ 0.28
SDHB-201ENST00000375499 RDH13Q8NBN7 331 aa16.82■□□□□ 0.28
SDHB-201ENST00000375499 ATAD1Q8NBU5 361 aa16.82■□□□□ 0.28
SDHB-201ENST00000375499 SCAND2PQ9GZW5 306 aaPredicted RBP16.82■□□□□ 0.28
SDHB-201ENST00000375499 DNAJC25Q9H1X3 360 aa16.82■□□□□ 0.28
SDHB-201ENST00000375499 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.82■□□□□ 0.28
SDHB-201ENST00000375499 CDH7Q9ULB5 785 aa16.82■□□□□ 0.28
SDHB-201ENST00000375499 AGAP1Q9UPQ3 857 aa16.82■□□□□ 0.28
SDHB-201ENST00000375499 NUMBLQ9Y6R0 609 aa16.82■□□□□ 0.28
SDHB-201ENST00000375499 EP300Q09472 2414 aaPredicted RBP16.81■□□□□ 0.28
SDHB-201ENST00000375499 A0A1W2PQ27 194 aa16.81■□□□□ 0.28
SDHB-201ENST00000375499 A0A1W2PQ64 194 aa16.81■□□□□ 0.28
SDHB-201ENST00000375499 A0A1W2PQD8 194 aa16.81■□□□□ 0.28
SDHB-201ENST00000375499 OR6C75A6NL08 312 aa16.81■□□□□ 0.28
SDHB-201ENST00000375499 KPNA7A9QM74 516 aa16.81■□□□□ 0.28
SDHB-201ENST00000375499 KIAA0391O15091 583 aaKnown RBP16.81■□□□□ 0.28
SDHB-201ENST00000375499 SOAT2O75908 522 aa16.81■□□□□ 0.28
SDHB-201ENST00000375499 DUSP4Q13115 394 aa16.81■□□□□ 0.28
SDHB-201ENST00000375499 GPR17Q13304 367 aa16.81■□□□□ 0.28
SDHB-201ENST00000375499 MYBPC2Q14324 1141 aa16.81■□□□□ 0.28
SDHB-201ENST00000375499 CCDC142Q17RM4 750 aa16.81■□□□□ 0.28
SDHB-201ENST00000375499 CSGALNACT2Q8N6G5 542 aa16.81■□□□□ 0.28
SDHB-201ENST00000375499 DTWD2Q8NBA8 298 aa16.81■□□□□ 0.28
SDHB-201ENST00000375499 FLCNQ8NFG4 579 aa16.81■□□□□ 0.28
SDHB-201ENST00000375499 NXPE3Q969Y0 559 aa16.81■□□□□ 0.28
SDHB-201ENST00000375499 ZNF560Q96MR9 790 aa16.81■□□□□ 0.28
SDHB-201ENST00000375499 CORO1BQ9BR76 489 aa16.81■□□□□ 0.28
SDHB-201ENST00000375499 EXOC1Q9NV70 894 aa16.81■□□□□ 0.28
SDHB-201ENST00000375499 INTS13Q9NVM9 706 aa16.81■□□□□ 0.28
SDHB-201ENST00000375499 WNT16Q9UBV4 365 aa16.81■□□□□ 0.28
SDHB-201ENST00000375499 L1RE1Q9UN81 338 aa16.81■□□□□ 0.28
SDHB-201ENST00000375499 ATP6V1DQ9Y5K8 247 aa16.81■□□□□ 0.28
SDHB-201ENST00000375499 CACNA1AO00555 2505 aa16.81■□□□□ 0.28
SDHB-201ENST00000375499 ZNF233A6NK53 670 aa16.8■□□□□ 0.28
SDHB-201ENST00000375499 HCRTO43612 131 aa16.8■□□□□ 0.28
SDHB-201ENST00000375499 MOSPD3O75425 235 aa16.8■□□□□ 0.28
SDHB-201ENST00000375499 TMEM191BP0C7N4 346 aa16.8■□□□□ 0.28
SDHB-201ENST00000375499 NPR3P17342 541 aa16.8■□□□□ 0.28
SDHB-201ENST00000375499 BFSP1Q12934 665 aa16.8■□□□□ 0.28
SDHB-201ENST00000375499 ANGPT1Q15389 498 aa16.8■□□□□ 0.28
SDHB-201ENST00000375499 SNRNP35Q16560 246 aaKnown RBP16.8■□□□□ 0.28
SDHB-201ENST00000375499 KNOP1Q1ED39 458 aaKnown RBP16.8■□□□□ 0.28
SDHB-201ENST00000375499 SV2CQ496J9 727 aa16.8■□□□□ 0.28
SDHB-201ENST00000375499 CWF19L1Q69YN2 538 aaKnown RBP16.8■□□□□ 0.28
SDHB-201ENST00000375499 CENPPQ6IPU0 288 aa16.8■□□□□ 0.28
SDHB-201ENST00000375499 LRRTM3Q86VH5 581 aa16.8■□□□□ 0.28
SDHB-201ENST00000375499 OSTM1Q86WC4 334 aa16.8■□□□□ 0.28
SDHB-201ENST00000375499 SLC44A3Q8N4M1 653 aa16.8■□□□□ 0.28
SDHB-201ENST00000375499 PLEKHO2Q8TD55 490 aa16.8■□□□□ 0.28
SDHB-201ENST00000375499 ZCWPW1Q9H0M4 648 aa16.8■□□□□ 0.28
SDHB-201ENST00000375499 AVENQ9NQS1 362 aaPredicted RBP16.8■□□□□ 0.28
SDHB-201ENST00000375499 USP25Q9UHP3 1055 aa16.8■□□□□ 0.28
SDHB-201ENST00000375499 SLC27A5Q9Y2P5 690 aa16.8■□□□□ 0.28
SDHB-201ENST00000375499 MRPS23Q9Y3D9 190 aaKnown RBP16.8■□□□□ 0.28
SDHB-201ENST00000375499 MYO15AQ9UKN7 3530 aa16.79■□□□□ 0.28
SDHB-201ENST00000375499 LMNAP02545 664 aaKnown RBP16.79■□□□□ 0.28
SDHB-201ENST00000375499 RPN1P04843 607 aaKnown RBP16.79■□□□□ 0.28
SDHB-201ENST00000375499 KRT19P08727 400 aa16.79■□□□□ 0.28
SDHB-201ENST00000375499 GJA1P17302 382 aa16.79■□□□□ 0.28
SDHB-201ENST00000375499 PAX3P23760 479 aa16.79■□□□□ 0.28
SDHB-201ENST00000375499 CYP24A1Q07973 514 aa16.79■□□□□ 0.28
SDHB-201ENST00000375499 DPYDQ12882 1025 aa16.79■□□□□ 0.28
SDHB-201ENST00000375499 SLC39A12Q504Y0 691 aa16.79■□□□□ 0.28
SDHB-201ENST00000375499 KRBA2Q6ZNG9 492 aa16.79■□□□□ 0.28
SDHB-201ENST00000375499 C12orf56Q8IXR9 622 aa16.79■□□□□ 0.28
SDHB-201ENST00000375499 PDCL2Q8N4E4 241 aa16.79■□□□□ 0.28
SDHB-201ENST00000375499 LRRC52Q8N7C0 313 aa16.79■□□□□ 0.28
SDHB-201ENST00000375499 CACTINQ8WUQ7 758 aaKnown RBP16.79■□□□□ 0.28
SDHB-201ENST00000375499 OXCT2Q9BYC2 517 aaPredicted RBP16.79■□□□□ 0.28
SDHB-201ENST00000375499 KCTD10Q9H3F6 313 aa16.79■□□□□ 0.28
SDHB-201ENST00000375499 TMLHEQ9NVH6 421 aa16.79■□□□□ 0.28
SDHB-201ENST00000375499 FBXL21Q9UKT6 434 aa16.79■□□□□ 0.28
SDHB-201ENST00000375499 ITGA11Q9UKX5 1188 aa16.79■□□□□ 0.28
SDHB-201ENST00000375499 ZNF202O95125 648 aa16.78■□□□□ 0.28
SDHB-201ENST00000375499 CFHP08603 1231 aa16.78■□□□□ 0.28
SDHB-201ENST00000375499 DLATP10515 647 aaKnown RBP16.78■□□□□ 0.28
SDHB-201ENST00000375499 PTPN2P17706 415 aa16.78■□□□□ 0.28
SDHB-201ENST00000375499 PNPLA4P41247 253 aa16.78■□□□□ 0.28
SDHB-201ENST00000375499 CASP4P49662 377 aa16.78■□□□□ 0.28
SDHB-201ENST00000375499 HS2ST1Q7LGA3 356 aa16.78■□□□□ 0.28
SDHB-201ENST00000375499 TMC8Q8IU68 726 aa16.78■□□□□ 0.28
SDHB-201ENST00000375499 WDR49Q8IV35 697 aa16.78■□□□□ 0.28
SDHB-201ENST00000375499 XXYLT1Q8NBI6 393 aa16.78■□□□□ 0.28
SDHB-201ENST00000375499 ZNF516Q92618 1163 aa16.78■□□□□ 0.28
SDHB-201ENST00000375499 MCRS1Q96EZ8 462 aa16.78■□□□□ 0.28
SDHB-201ENST00000375499 ANKRD36BP1Q96IX9 119 aa16.78■□□□□ 0.28
SDHB-201ENST00000375499 CGRRF1Q99675 332 aa16.78■□□□□ 0.28
SDHB-201ENST00000375499 KXD1Q9BQD3 176 aa16.78■□□□□ 0.28
SDHB-201ENST00000375499 LRRC3Q9BY71 257 aa16.78■□□□□ 0.28
SDHB-201ENST00000375499 DSEQ9UL01 958 aa16.78■□□□□ 0.28
SDHB-201ENST00000375499 MAFFQ9ULX9 164 aa16.78■□□□□ 0.28
SDHB-201ENST00000375499 NCANO14594 1321 aa16.77■□□□□ 0.28
SDHB-201ENST00000375499 KRBA1A5PL33 1030 aa16.77■□□□□ 0.28
SDHB-201ENST00000375499 PI15O43692 258 aa16.77■□□□□ 0.28
SDHB-201ENST00000375499 ATF6P18850 670 aa16.77■□□□□ 0.28
SDHB-201ENST00000375499 ACAT1P24752 427 aaKnown RBP16.77■□□□□ 0.28
SDHB-201ENST00000375499 EPHA5P54756 1037 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms