RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 SFI1A8K8P3 1242 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 VSTM5A8MXK1 200 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 H0Y8G0 127 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 LRRN2O75325 713 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 ATP6V1G1O75348 118 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 IFNA16P05015 189 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 KRT16P08779 473 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 CDH2P19022 906 aaPredicted RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 IL10P22301 178 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 SRP54P61011 504 aaKnown RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 ATP8B2P98198 1209 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 RASGEF1BQ0VAM2 473 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 ECH1Q13011 328 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 TMEM132BQ14DG7 1078 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 SNCBQ16143 134 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 EML3Q32P44 896 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 ZC2HC1CQ53FD0 456 aaPredicted RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 STKLD1Q8NE28 680 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 CD274Q9NZQ7 290 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 TMA7Q9Y2S6 64 aaKnown RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 A0A0X1KG70 313 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 AP3B1O00203 1094 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 E2F3O00716 465 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 SEC31AO94979 1220 aaKnown RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 PDHA1P08559 390 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 C21orf59P57076 290 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 TUBB4BP68371 445 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 RGS1Q08116 209 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 DNAJC24Q6P3W2 148 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 OTOAQ7RTW8 1153 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 SH3TC2Q8TF17 1288 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 RHBGQ9H310 441 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 ARMC7Q9H6L4 198 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 VIPAS39Q9H9C1 493 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 CDH7Q9ULB5 785 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 USP18Q9UMW8 372 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 TTF2Q9UNY4 1162 aaKnown RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 DAGLAQ9Y4D2 1042 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 STX16-NPEPL1H3BU86 382 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 SERPINB1P30740 379 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 NCOA2Q15596 1464 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 MAPK6Q16659 721 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 RAP1GAP2Q684P5 730 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 DEF8Q6ZN54 512 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 CMTR1Q8N1G2 835 aaKnown RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 OR2W6PQ8NHA6 318 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 APPBP2Q92624 585 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 MAML3Q96JK9 1138 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 PASKQ96RG2 1323 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 ADAM7Q9H2U9 754 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 MROH8Q9H579 483 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 CYP4F12Q9HCS2 524 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 PHF24Q9UPV7 400 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 HIF3AQ9Y2N7 669 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 ANKRD50Q9ULJ7 1429 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 LRPPRCP42704 1394 aaKnown RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 H0YCG3 227 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 AKAP8O43823 692 aaKnown RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 RGS20O76081 388 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 SCP2P22307 547 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 NKX1-1Q15270 411 aaPredicted RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 TCEAL6Q6IPX3 200 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 OSCARQ8IYS5 282 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 RBBP8NLQ8NC74 664 aaPredicted RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 TCEAL3Q969E4 200 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 LRRC46Q96FV0 321 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 YME1L1Q96TA2 773 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 GPER1Q99527 375 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 RDH8Q9NYR8 311 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 UVRAGQ9P2Y5 699 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 TDRKHQ9Y2W6 561 aaKnown RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 EMILIN1Q9Y6C2 1016 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 DHX29Q7Z478 1369 aaKnown RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 SOS1Q07889 1333 aaPredicted RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 A0A096LPK6 155 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 GAS2O43903 313 aaKnown RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 HUS1O60921 280 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 ATP9AO75110 1047 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 ASLP04424 464 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 H2AFXP16104 143 aaPredicted RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 ASMTP46597 345 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 CLK3P49761 638 aaKnown RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 NLRP11P59045 1033 aaKnown RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 ETF1P62495 437 aaKnown RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 GPATCH4Q5T3I0 446 aaKnown RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 MYO1HQ8N1T3 1032 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 MAGEE2Q8TD90 523 aaPredicted RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 MRPL9Q9BYD2 267 aaKnown RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 PITPNM3Q9BZ71 974 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 GLT8D2Q9H1C3 349 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 EML4Q9HC35 981 aaKnown RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 PNPLA8Q9NP80 782 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 KMT5AQ9NQR1 393 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 USP40Q9NVE5 1235 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 STOML1Q9UBI4 398 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 DNMT3LQ9UJW3 386 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 GIT1Q9Y2X7 761 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 DDX3YO15523 660 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms