RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 MIPEPQ99797 713 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 TEX13BQ9BXU2 312 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.82□□□□□ -0.361e-7■■■■■ 223.6
C9orf3-203ENST00000375315 HOXC10Q9NYD6 342 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 PTTG2Q9NZH5 202 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 BARX2Q9UMQ3 279 aaPredicted RBP12.82□□□□□ -0.36
C9orf3-203ENST00000375315 DNM3Q9UQ16 869 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 ADGRA3Q8IWK6 1321 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 A6NJR5 290 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 GYG2O15488 501 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 SUPT3HO75486 399 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 ITGA9Q13797 1035 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 SLC44A4Q53GD3 710 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 DCAF12L1Q5VU92 463 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 IZUMO2Q6UXV1 221 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 EPM2AIP1Q7L775 607 aaPredicted RBP12.82□□□□□ -0.36
C9orf3-203ENST00000375315 MCF2L2Q86YR7 1114 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 MYOCDQ8IZQ8 938 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 SMC6Q96SB8 1091 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 EHMT1Q9H9B1 1298 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 ACTL7BQ9Y614 415 aa12.82□□□□□ -0.36
C9orf3-203ENST00000375315 IQCA1LA6NCM1 817 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 FAM47DPA6NHR8 397 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 A8MXQ7 604 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 ZNF211Q13398 564 aaPredicted RBP12.81□□□□□ -0.36
C9orf3-203ENST00000375315 CYLC2Q14093 348 aaPredicted RBP12.81□□□□□ -0.36
C9orf3-203ENST00000375315 Q3C1V9 767 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 TCERG1LQ5VWI1 586 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 PHLDB2Q86SQ0 1253 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 TRIM59Q8IWR1 403 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 ARHGAP24Q8N264 748 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 ERMNQ8TAM6 284 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 SYNGAP1Q96PV0 1343 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 SBF1O95248 1867 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 FAM170AA1A519 330 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 GSC2O15499 205 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 GFPT2O94808 682 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 NR3C2P08235 984 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 PRKCIP41743 596 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 PHEXP78562 749 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 PGM5Q15124 567 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 NCCRP1Q6ZVX7 275 aaPredicted RBP12.81□□□□□ -0.36
C9orf3-203ENST00000375315 ARMCX6Q7L4S7 300 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 NLRP9Q7RTR0 991 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 MIER3Q7Z3K6 550 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 ERO1BQ86YB8 467 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 PDCD7Q8N8D1 485 aaKnown RBP12.81□□□□□ -0.36
C9orf3-203ENST00000375315 U2AF1L4Q8WU68 220 aaKnown RBP12.81□□□□□ -0.36
C9orf3-203ENST00000375315 C10orf82Q8WW14 230 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 SLC35B4Q969S0 331 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 NMD3Q96D46 503 aaKnown RBP12.81□□□□□ -0.36
C9orf3-203ENST00000375315 FNBP1Q96RU3 617 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 ECSITQ9BQ95 431 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 LBHD1Q9BQE6 289 aaPredicted RBP12.81□□□□□ -0.36
C9orf3-203ENST00000375315 MXRA8Q9BRK3 442 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 TXNRD2Q9NNW7 524 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 WRAP73Q9P2S5 460 aaPredicted RBP12.81□□□□□ -0.36
C9orf3-203ENST00000375315 PPP2R3BQ9Y5P8 575 aa12.81□□□□□ -0.36
C9orf3-203ENST00000375315 BTBD19C9JJ37 291 aa12.8□□□□□ -0.36
C9orf3-203ENST00000375315 EXOC3O60645 756 aa12.8□□□□□ -0.36
C9orf3-203ENST00000375315 SPATA31C1P0DKV0 1188 aa12.8□□□□□ -0.36
C9orf3-203ENST00000375315 TKFCQ3LXA3 575 aa12.8□□□□□ -0.36
C9orf3-203ENST00000375315 CCDC137Q6PK04 289 aaKnown RBP12.8□□□□□ -0.36
C9orf3-203ENST00000375315 CCDC80Q76M96 950 aa12.8□□□□□ -0.36
C9orf3-203ENST00000375315 OTOP1Q7RTM1 612 aa12.8□□□□□ -0.36
C9orf3-203ENST00000375315 CRYGNQ8WXF5 182 aa12.8□□□□□ -0.36
C9orf3-203ENST00000375315 RFFLQ8WZ73 363 aa12.8□□□□□ -0.36
C9orf3-203ENST00000375315 PDCD2LQ9BRP1 358 aa12.8□□□□□ -0.36
C9orf3-203ENST00000375315 STK17AQ9UEE5 414 aa12.8□□□□□ -0.36
C9orf3-203ENST00000375315 PIK3CDO00329 1044 aa12.8□□□□□ -0.36
C9orf3-203ENST00000375315 EDF1O60869 148 aaKnown RBP12.8□□□□□ -0.36
C9orf3-203ENST00000375315 PSMD7P51665 324 aa12.8□□□□□ -0.36
C9orf3-203ENST00000375315 SPIRE1Q08AE8 756 aa12.8□□□□□ -0.36
C9orf3-203ENST00000375315 SPARCL1Q14515 664 aa12.8□□□□□ -0.36
C9orf3-203ENST00000375315 FYB2Q5VWT5 728 aa12.8□□□□□ -0.36
C9orf3-203ENST00000375315 CCDC105Q8IYK2 499 aa12.8□□□□□ -0.36
C9orf3-203ENST00000375315 SNRNP27Q8WVK2 155 aaKnown RBP12.8□□□□□ -0.36
C9orf3-203ENST00000375315 CCDC77Q9BR77 488 aa12.8□□□□□ -0.36
C9orf3-203ENST00000375315 TEKT3Q9BXF9 490 aa12.8□□□□□ -0.36
C9orf3-203ENST00000375315 LRRC27Q9C0I9 530 aa12.8□□□□□ -0.36
C9orf3-203ENST00000375315 CEP350Q5VT06 3117 aa12.8□□□□□ -0.36
C9orf3-203ENST00000375315 ARFGEF1Q9Y6D6 1849 aa12.8□□□□□ -0.36
C9orf3-203ENST00000375315 C2CD2LO14523 706 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 CDH16O75309 829 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 IDO1P14902 403 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 GJA5P36382 358 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 GALCP54803 685 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 ADCY1Q08828 1119 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 DNAJC14Q6Y2X3 702 aaPredicted RBP12.79□□□□□ -0.36
C9orf3-203ENST00000375315 CLNKQ7Z7G1 428 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 RSPH1Q8WYR4 309 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 DGCR14Q96DF8 476 aaKnown RBP12.79□□□□□ -0.36
C9orf3-203ENST00000375315 RUSC1Q9BVN2 902 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 PXMP2Q9NR77 195 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 SPATA7Q9P0W8 599 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 TBK1Q9UHD2 729 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 LGALS13Q9UHV8 139 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 ITGB1BP2Q9UKP3 347 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 RABGAP1Q9Y3P9 1069 aa12.79□□□□□ -0.36
C9orf3-203ENST00000375315 FOXO6A8MYZ6 492 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms