RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 ADGRA2Q96PE1 1338 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 TTC26A0AVF1 554 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 UBE2QL1A1L167 161 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 ZNF197O14709 1029 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 LIFRP42702 1097 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 GPS1Q13098 491 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 MTFR1Q15390 333 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 RFX4Q33E94 735 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 PITRM1Q5JRX3 1037 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 CITED4Q96RK1 184 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 PCDH11YQ9BZA8 1340 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 USP27XA6NNY8 438 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 CD3EAPO15446 510 aaKnown RBP6.9□□□□□ -1.31
UBR4-204ENST00000375254 GYS1P13807 737 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 IMPAD1Q9NX62 359 aa6.9□□□□□ -1.31
UBR4-204ENST00000375254 TAF5LO75529 589 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 ANPEPP15144 967 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 DDR2Q16832 855 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 KRT26Q7Z3Y9 468 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 RNF135Q8IUD6 432 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 ZDHHC13Q8IUH4 622 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 NELFCDQ8IXH7 590 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 ASNSD1Q9NWL6 643 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 TRPM5Q9NZQ8 1165 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 CCND2P30279 289 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 TIE1P35590 1138 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 ECSITQ9BQ95 431 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 PLEKHA5Q9HAU0 1116 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 TRMT112Q9UI30 125 aaKnown RBP6.89□□□□□ -1.31
UBR4-204ENST00000375254 ISPDA4D126 451 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 CAPN12Q6ZSI9 719 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 FRMD5Q7Z6J6 570 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 ZNF285Q96NJ3 590 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 WRNIP1Q96S55 665 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 MAGEB3O15480 346 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 MYO1DO94832 1006 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 FYNP06241 537 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 NFKBIAP25963 317 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 CASP4P49662 377 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 PPM1NQ8N819 430 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 Q96MT0 163 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 SNX9Q9Y5X1 595 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 FAM170AA1A519 330 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 MAPRE1Q15691 268 aaKnown RBP6.89□□□□□ -1.31
UBR4-204ENST00000375254 CCDC142Q17RM4 750 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 JPH4Q96JJ6 628 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 NACC1Q96RE7 527 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 CHST3Q7LGC8 479 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 USP38Q8NB14 1042 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 PROX1Q92786 737 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 MYDGFQ969H8 173 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 CLIC5Q9NZA1 410 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.89□□□□□ -1.31
UBR4-204ENST00000375254 RAD54BQ9Y620 910 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 OR14I1A6ND48 311 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 SAT1P21673 171 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 RPL22P35268 128 aaKnown RBP6.89□□□□□ -1.31
UBR4-204ENST00000375254 PHKA1P46020 1223 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 GSSP48637 474 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 PHC1P78364 1004 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 DDI2Q5TDH0 399 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 IRGQQ8WZA9 623 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 TUBA1CQ9BQE3 449 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 FICDQ9BVA6 458 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 VAV3Q9UKW4 847 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 CCDC141Q6ZP82 1450 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 TNPO2O14787 897 aaKnown RBP6.89□□□□□ -1.31
UBR4-204ENST00000375254 PDPK1O15530 556 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 PRMT3O60678 531 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 FOLH1Q04609 750 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 FAM98BQ52LJ0 330 aaKnown RBP6.89□□□□□ -1.31
UBR4-204ENST00000375254 HERC3Q15034 1050 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 BNC2Q6ZN30 1099 aaPredicted RBP6.89□□□□□ -1.31
UBR4-204ENST00000375254 TP53INP1Q96A56 240 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 PTCD3Q96EY7 689 aaKnown RBP6.89□□□□□ -1.31
UBR4-204ENST00000375254 CYP2C9P11712 490 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 CD19P15391 556 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 EIF5AP63241 154 aaKnown RBP6.89□□□□□ -1.31
UBR4-204ENST00000375254 UBASH3BQ8TF42 649 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 ZSCAN9O15535 394 aaPredicted RBP6.89□□□□□ -1.31
UBR4-204ENST00000375254 TOM1O60784 492 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 GSPT1P15170 499 aaKnown RBP6.89□□□□□ -1.31
UBR4-204ENST00000375254 TUFMP49411 452 aaKnown RBP6.89□□□□□ -1.31
UBR4-204ENST00000375254 HSF2Q03933 536 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 BTKQ06187 659 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 TSNQ15631 228 aaKnown RBP6.89□□□□□ -1.31
UBR4-204ENST00000375254 SMU1Q2TAY7 513 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 DNAJC24Q6P3W2 148 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 RASAL3Q86YV0 1011 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 VMP1Q96GC9 406 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 PSTPIP2Q9H939 334 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 YES1P07947 543 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 ARL4AP40617 200 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 BLIDQ8IZY5 108 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 UBE2TQ9NPD8 197 aaPredicted RBP6.89□□□□□ -1.31
UBR4-204ENST00000375254 MCUBQ9NWR8 336 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 CHPF2Q9P2E5 772 aa6.89□□□□□ -1.31
UBR4-204ENST00000375254 PDIA2Q13087 525 aaKnown RBP6.88□□□□□ -1.31
UBR4-204ENST00000375254 OASLQ15646 514 aaKnown RBP6.88□□□□□ -1.31
UBR4-204ENST00000375254 EBF2Q9HAK2 575 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms